RNA–Protein interactions for RNA: ENST00000373703.4

PEF1-201, Transcript of penta-EF-hand domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEF1, Length 1,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-201ENST00000373703 SMC1BQ8NDV3 1235 aa17.73■□□□□ 0.43
PEF1-201ENST00000373703 FAM151AQ8WW52 585 aa17.73■□□□□ 0.43
PEF1-201ENST00000373703 RUFY2Q8WXA3 655 aa17.73■□□□□ 0.43
PEF1-201ENST00000373703 CCDC171Q6TFL3 1326 aa17.73■□□□□ 0.43
PEF1-201ENST00000373703 TRAF5O00463 557 aa17.72■□□□□ 0.43
PEF1-201ENST00000373703 ENTPD3O75355 529 aa17.72■□□□□ 0.43
PEF1-201ENST00000373703 APPP05067 770 aa17.72■□□□□ 0.43
PEF1-201ENST00000373703 FMR1Q06787 632 aaKnown RBP eCLIP17.72■□□□□ 0.43
PEF1-201ENST00000373703 VPS53Q5VIR6 699 aa17.72■□□□□ 0.43
PEF1-201ENST00000373703 CDAN1Q8IWY9 1227 aa17.72■□□□□ 0.43
PEF1-201ENST00000373703 RBM46Q8TBY0 533 aaKnown RBP17.72■□□□□ 0.43
PEF1-201ENST00000373703 OSBPL5Q9H0X9 879 aaPredicted RBP17.72■□□□□ 0.43
PEF1-201ENST00000373703 POLR2AP24928 1970 aaKnown RBP17.72■□□□□ 0.43
PEF1-201ENST00000373703 GSG1L2A8MUP6 293 aa17.72■□□□□ 0.43
PEF1-201ENST00000373703 NPM3O75607 178 aaKnown RBP17.72■□□□□ 0.43
PEF1-201ENST00000373703 GNAT2P19087 354 aa17.72■□□□□ 0.43
PEF1-201ENST00000373703 SLC4A8Q2Y0W8 1093 aa17.72■□□□□ 0.43
PEF1-201ENST00000373703 CASC1Q6TDU7 716 aa17.72■□□□□ 0.43
PEF1-201ENST00000373703 ZSCAN29Q8IWY8 852 aaPredicted RBP17.72■□□□□ 0.43
PEF1-201ENST00000373703 DCP1AQ9NPI6 582 aaPredicted RBP17.72■□□□□ 0.43
PEF1-201ENST00000373703 SAP30BPQ9UHR5 308 aaKnown RBP17.72■□□□□ 0.43
PEF1-201ENST00000373703 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.43
PEF1-201ENST00000373703 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.43
PEF1-201ENST00000373703 ITGBL1O95965 494 aaPredicted RBP17.71■□□□□ 0.43
PEF1-201ENST00000373703 TEPSINQ96N21 525 aa17.71■□□□□ 0.43
PEF1-201ENST00000373703 ATP8A2Q9NTI2 1148 aa17.71■□□□□ 0.43
PEF1-201ENST00000373703 MKRN1Q9UHC7 482 aaKnown RBP17.71■□□□□ 0.43
PEF1-201ENST00000373703 PALD1Q9ULE6 856 aa17.71■□□□□ 0.43
PEF1-201ENST00000373703 PPP2R3BQ9Y5P8 575 aa17.71■□□□□ 0.43
PEF1-201ENST00000373703 SGSM2O43147 1006 aa17.7■□□□□ 0.42
PEF1-201ENST00000373703 MFAP1P55081 439 aaKnown RBP17.7■□□□□ 0.42
PEF1-201ENST00000373703 NBPF12Q5TAG4 269 aaPredicted RBP17.7■□□□□ 0.42
PEF1-201ENST00000373703 SH3BP5LQ7L8J4 393 aa17.7■□□□□ 0.42
PEF1-201ENST00000373703 CDCA5Q96FF9 252 aa17.7■□□□□ 0.42
PEF1-201ENST00000373703 ESYT1Q9BSJ8 1104 aa17.7■□□□□ 0.42
PEF1-201ENST00000373703 MCM9Q9NXL9 1143 aa17.7■□□□□ 0.42
PEF1-201ENST00000373703 RAD50Q92878 1312 aa17.7■□□□□ 0.42
PEF1-201ENST00000373703 FOXP2O15409 715 aa17.69■□□□□ 0.42
PEF1-201ENST00000373703 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
PEF1-201ENST00000373703 IFNL3Q8IZI9 196 aa17.69■□□□□ 0.42
PEF1-201ENST00000373703 DDRGK1Q96HY6 314 aa17.69■□□□□ 0.42
PEF1-201ENST00000373703 EPB41L4AQ9HCS5 686 aaPredicted RBP17.69■□□□□ 0.42
PEF1-201ENST00000373703 CDK5RAP2Q96SN8 1893 aa17.69■□□□□ 0.42
PEF1-201ENST00000373703 CSRNP1Q96S65 589 aa17.69■□□□□ 0.42
PEF1-201ENST00000373703 ZNF408Q9H9D4 720 aa17.69■□□□□ 0.42
PEF1-201ENST00000373703 POLR3DP05423 398 aaPredicted RBP17.68■□□□□ 0.42
PEF1-201ENST00000373703 TDO2P48775 406 aa17.68■□□□□ 0.42
PEF1-201ENST00000373703 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
PEF1-201ENST00000373703 FOCADQ5VW36 1801 aa17.67■□□□□ 0.42
PEF1-201ENST00000373703 USP17L12C9JPN9 530 aa17.67■□□□□ 0.42
PEF1-201ENST00000373703 USP17L21D6R901 530 aa17.67■□□□□ 0.42
PEF1-201ENST00000373703 SLURP2P0DP57 97 aa17.67■□□□□ 0.42
PEF1-201ENST00000373703 EVX2Q03828 476 aa17.67■□□□□ 0.42
PEF1-201ENST00000373703 FSTL1Q12841 308 aa17.67■□□□□ 0.42
PEF1-201ENST00000373703 GIMAP6Q6P9H5 292 aa17.67■□□□□ 0.42
PEF1-201ENST00000373703 MIGA2Q7L4E1 593 aa17.67■□□□□ 0.42
PEF1-201ENST00000373703 DHX36Q9H2U1 1008 aaKnown RBP17.67■□□□□ 0.42
PEF1-201ENST00000373703 ATRNL1Q5VV63 1379 aa17.67■□□□□ 0.42
PEF1-201ENST00000373703 RPAP1Q9BWH6 1393 aaPredicted RBP17.67■□□□□ 0.42
PEF1-201ENST00000373703 CYP2D7A0A087X1C5 515 aa17.66■□□□□ 0.42
PEF1-201ENST00000373703 CYP2D6P10635 497 aa17.66■□□□□ 0.42
PEF1-201ENST00000373703 PLCD1P51178 756 aa17.66■□□□□ 0.42
PEF1-201ENST00000373703 PRKG1Q13976 671 aa17.66■□□□□ 0.42
PEF1-201ENST00000373703 SUPT20HL1Q3ZLR7 823 aa17.66■□□□□ 0.42
PEF1-201ENST00000373703 CTR9Q6PD62 1173 aa17.66■□□□□ 0.42
PEF1-201ENST00000373703 NAPBQ9H115 298 aa17.66■□□□□ 0.42
PEF1-201ENST00000373703 FZD1Q9UP38 647 aa17.66■□□□□ 0.42
PEF1-201ENST00000373703 PASKQ96RG2 1323 aa17.66■□□□□ 0.42
PEF1-201ENST00000373703 SMIM22K7EJ46 135 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 CELF2O95319 508 aaKnown RBP17.65■□□□□ 0.42
PEF1-201ENST00000373703 FGAP02671 866 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 HLA-DOAP06340 250 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 PTH1RQ03431 593 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 PI4KBQ9UBF8 816 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 NAV1Q8NEY1 1877 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 COL2A1P02458 1487 aaPredicted RBP17.65■□□□□ 0.42
PEF1-201ENST00000373703 MINDY4BA8MYZ0 360 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 NF2P35240 595 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 TTC6Q86TZ1 520 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 AMOTL1Q8IY63 956 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 DSCC1Q9BVC3 393 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 ANO2Q9NQ90 1003 aa17.65■□□□□ 0.42
PEF1-201ENST00000373703 ARPP21Q9UBL0 812 aaPredicted RBP17.65■□□□□ 0.42
PEF1-201ENST00000373703 SSC5DA1L4H1 1573 aa17.64■□□□□ 0.42
PEF1-201ENST00000373703 C12orf60Q5U649 245 aa17.64■□□□□ 0.41
PEF1-201ENST00000373703 CST9Q5W186 159 aa17.64■□□□□ 0.41
PEF1-201ENST00000373703 BAZ2AQ9UIF9 1905 aaKnown RBP17.63■□□□□ 0.41
PEF1-201ENST00000373703 FAM196BA6NMK8 535 aa17.63■□□□□ 0.41
PEF1-201ENST00000373703 ALX1Q15699 326 aa17.63■□□□□ 0.41
PEF1-201ENST00000373703 SBK1Q52WX2 424 aa17.63■□□□□ 0.41
PEF1-201ENST00000373703 STK11IPQ8N1F8 1099 aa17.63■□□□□ 0.41
PEF1-201ENST00000373703 CRACR2BQ8N4Y2 399 aaPredicted RBP17.63■□□□□ 0.41
PEF1-201ENST00000373703 LSG1Q9H089 658 aaKnown RBP17.63■□□□□ 0.41
PEF1-201ENST00000373703 MYH1P12882 1939 aa17.63■□□□□ 0.41
PEF1-201ENST00000373703 DDX60LQ5H9U9 1706 aaKnown RBP17.62■□□□□ 0.41
PEF1-201ENST00000373703 TTLL12Q14166 644 aaPredicted RBP17.62■□□□□ 0.41
PEF1-201ENST00000373703 MOB2Q70IA6 237 aa17.62■□□□□ 0.41
PEF1-201ENST00000373703 FOXP4Q8IVH2 680 aaPredicted RBP17.62■□□□□ 0.41
PEF1-201ENST00000373703 HOOK2Q96ED9 719 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms