RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 FOXD4L3Q6VB84 417 aaPredicted RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 FAM184AQ8NB25 1140 aa18.43■□□□□ 0.54
HDAC8-209ENST00000373589 FAM163AQ96GL9 167 aaPredicted RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 RTFDC1Q9BY42 306 aaPredicted RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 PDGFDQ9GZP0 370 aaPredicted RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 GZF1Q9H116 711 aaPredicted RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 TMX4Q9H1E5 349 aaPredicted RBP18.43■□□□□ 0.54
HDAC8-209ENST00000373589 CYP2D7A0A087X1C5 515 aa18.42■□□□□ 0.54
HDAC8-209ENST00000373589 IFIT3O14879 490 aaKnown RBP18.42■□□□□ 0.54
HDAC8-209ENST00000373589 RIMBP2O15034 1052 aa18.42■□□□□ 0.54
HDAC8-209ENST00000373589 BAG3O95817 575 aa18.42■□□□□ 0.54
HDAC8-209ENST00000373589 RRP12Q5JTH9 1297 aaKnown RBP18.42■□□□□ 0.54
HDAC8-209ENST00000373589 KIF3AQ9Y496 699 aa18.42■□□□□ 0.54
HDAC8-209ENST00000373589 BAZ2AQ9UIF9 1905 aaKnown RBP18.42■□□□□ 0.54
HDAC8-209ENST00000373589 FDPSP14324 419 aaKnown RBP18.41■□□□□ 0.54
HDAC8-209ENST00000373589 CERS3Q8IU89 383 aa18.41■□□□□ 0.54
HDAC8-209ENST00000373589 ESR2Q92731 530 aa18.41■□□□□ 0.54
HDAC8-209ENST00000373589 TOMM22Q9NS69 142 aa18.41■□□□□ 0.54
HDAC8-209ENST00000373589 ARPP21Q9UBL0 812 aaPredicted RBP18.41■□□□□ 0.54
HDAC8-209ENST00000373589 GPR75-ASB3A0A0A6YYF3 556 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 CHRNA5P30532 468 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 STK11IPQ8N1F8 1099 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 GPT2Q8TD30 523 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 SH3RF3Q8TEJ3 882 aaPredicted RBP18.4■□□□□ 0.54
HDAC8-209ENST00000373589 CNKSR1Q969H4 720 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 EYA3Q99504 573 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
HDAC8-209ENST00000373589 METAP2P50579 478 aaKnown RBP eCLIP18.4■□□□□ 0.54
HDAC8-209ENST00000373589 GTF2IP78347 998 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 SART3Q15020 963 aaKnown RBP18.4■□□□□ 0.54
HDAC8-209ENST00000373589 USP48Q86UV5 1035 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 C7orf43Q8WVR3 580 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 GDPD2Q9HCC8 539 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 SUGT1Q9Y2Z0 365 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 NID2Q14112 1375 aa18.4■□□□□ 0.54
HDAC8-209ENST00000373589 GAKO14976 1311 aa18.39■□□□□ 0.53
HDAC8-209ENST00000373589 ZBTB43O43298 467 aa18.39■□□□□ 0.53
HDAC8-209ENST00000373589 ORC4O43929 436 aa18.39■□□□□ 0.53
HDAC8-209ENST00000373589 DNM1Q05193 864 aaKnown RBP18.39■□□□□ 0.53
HDAC8-209ENST00000373589 NFXL1Q6ZNB6 911 aa18.39■□□□□ 0.53
HDAC8-209ENST00000373589 FERMT3Q86UX7 667 aa18.39■□□□□ 0.53
HDAC8-209ENST00000373589 RAB11FIP4Q86YS3 637 aa18.39■□□□□ 0.53
HDAC8-209ENST00000373589 TMTC2Q8N394 836 aa18.39■□□□□ 0.53
HDAC8-209ENST00000373589 NOL10Q9BSC4 688 aaKnown RBP18.39■□□□□ 0.53
HDAC8-209ENST00000373589 SLX4Q8IY92 1834 aa18.39■□□□□ 0.53
HDAC8-209ENST00000373589 C10orf71Q711Q0 1435 aa18.38■□□□□ 0.53
HDAC8-209ENST00000373589 MYH2Q9UKX2 1941 aa18.38■□□□□ 0.53
HDAC8-209ENST00000373589 H3BQV1 296 aa18.38■□□□□ 0.53
HDAC8-209ENST00000373589 EVX2Q03828 476 aa18.38■□□□□ 0.53
HDAC8-209ENST00000373589 WTAPQ15007 396 aa18.38■□□□□ 0.53
HDAC8-209ENST00000373589 SEC23AQ15436 765 aa18.38■□□□□ 0.53
HDAC8-209ENST00000373589 IFFO2Q5TF58 517 aa18.38■□□□□ 0.53
HDAC8-209ENST00000373589 SLF2Q8IX21 1173 aa18.38■□□□□ 0.53
HDAC8-209ENST00000373589 SLC16A10Q8TF71 515 aa18.38■□□□□ 0.53
HDAC8-209ENST00000373589 ZKSCAN3Q9BRR0 538 aa18.38■□□□□ 0.53
HDAC8-209ENST00000373589 LAMB1P07942 1786 aa18.38■□□□□ 0.53
HDAC8-209ENST00000373589 CCDC69A6NI79 296 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 CPLX1O14810 134 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 MBD3O95983 291 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 CYP2D6P10635 497 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 BTDP43251 543 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 USP5P45974 858 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 RESTQ13127 1097 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 FAM217BQ9NTX9 383 aaPredicted RBP18.37■□□□□ 0.53
HDAC8-209ENST00000373589 MCM9Q9NXL9 1143 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 SLC12A7Q9Y666 1083 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 TCHHQ07283 1943 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 SNED1Q8TER0 1413 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 ERICH2A1L162 156 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 CDC27P30260 824 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 ADD1P35611 737 aaKnown RBP18.37■□□□□ 0.53
HDAC8-209ENST00000373589 RCAN1P53805 252 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 DOK7Q18PE1 504 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 C12orf60Q5U649 245 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 MICU3Q86XE3 530 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 CERS5Q8N5B7 392 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 UBAC1Q9BSL1 405 aa18.37■□□□□ 0.53
HDAC8-209ENST00000373589 ZSCAN16Q9H4T2 348 aaPredicted RBP18.37■□□□□ 0.53
HDAC8-209ENST00000373589 PPFIA3O75145 1194 aa18.36■□□□□ 0.53
HDAC8-209ENST00000373589 SLC3A2P08195 630 aaKnown RBP18.36■□□□□ 0.53
HDAC8-209ENST00000373589 USP17L8P0C7I0 530 aa18.36■□□□□ 0.53
HDAC8-209ENST00000373589 PLCG2P16885 1265 aa18.36■□□□□ 0.53
HDAC8-209ENST00000373589 RXRAP19793 462 aa18.36■□□□□ 0.53
HDAC8-209ENST00000373589 RHBDL3P58872 404 aa18.36■□□□□ 0.53
HDAC8-209ENST00000373589 NTRK3Q16288 839 aa18.36■□□□□ 0.53
HDAC8-209ENST00000373589 PODNQ7Z5L7 613 aa18.36■□□□□ 0.53
HDAC8-209ENST00000373589 RGS22Q8NE09 1264 aa18.36■□□□□ 0.53
HDAC8-209ENST00000373589 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
HDAC8-209ENST00000373589 TNKSO95271 1327 aa18.36■□□□□ 0.53
HDAC8-209ENST00000373589 ROBO3Q96MS0 1386 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 GOLGA8AA7E2F4 631 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 GADD45BO75293 160 aaPredicted RBP18.35■□□□□ 0.53
HDAC8-209ENST00000373589 PRDM1O75626 825 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 CDKL5O76039 1030 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 NT5C2P49902 561 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 TGFBRAP1Q8WUH2 860 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 ZSCAN10Q96SZ4 725 aaPredicted RBP18.35■□□□□ 0.53
HDAC8-209ENST00000373589 MYL10Q9BUA6 226 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 RANBP6O60518 1105 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms