RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 NEUROD2Q15784 382 aa15.8■□□□□ 0.12
HDAC8-204ENST00000373560 MPHOSPH8Q99549 860 aa15.8■□□□□ 0.12
HDAC8-204ENST00000373560 RPAP1Q9BWH6 1393 aaPredicted RBP15.79■□□□□ 0.12
HDAC8-204ENST00000373560 HMGCRP04035 888 aa15.79■□□□□ 0.12
HDAC8-204ENST00000373560 ZNF341Q9BYN7 854 aa15.79■□□□□ 0.12
HDAC8-204ENST00000373560 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
HDAC8-204ENST00000373560 DOCK2Q92608 1830 aa15.78■□□□□ 0.12
HDAC8-204ENST00000373560 SHHQ15465 462 aa15.78■□□□□ 0.12
HDAC8-204ENST00000373560 TRIB2Q92519 343 aa15.78■□□□□ 0.12
HDAC8-204ENST00000373560 HMX1Q9NP08 348 aaPredicted RBP15.78■□□□□ 0.12
HDAC8-204ENST00000373560 ZNF112Q9UJU3 913 aa15.78■□□□□ 0.12
HDAC8-204ENST00000373560 H7C1W4 665 aa15.77■□□□□ 0.12
HDAC8-204ENST00000373560 ELL2O00472 640 aaPredicted RBP15.77■□□□□ 0.12
HDAC8-204ENST00000373560 RIOK3O14730 519 aaKnown RBP15.77■□□□□ 0.12
HDAC8-204ENST00000373560 GYG1P46976 350 aa15.77■□□□□ 0.12
HDAC8-204ENST00000373560 CASP7P55210 303 aa15.77■□□□□ 0.12
HDAC8-204ENST00000373560 ANKRD13CQ8N6S4 541 aa15.77■□□□□ 0.12
HDAC8-204ENST00000373560 TDRD7Q8NHU6 1098 aaKnown RBP15.77■□□□□ 0.12
HDAC8-204ENST00000373560 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.77■□□□□ 0.12
HDAC8-204ENST00000373560 DOCK1Q14185 1865 aa15.76■□□□□ 0.11
HDAC8-204ENST00000373560 SYNGAP1Q96PV0 1343 aa15.76■□□□□ 0.11
HDAC8-204ENST00000373560 NEURL1BA8MQ27 555 aa15.76■□□□□ 0.11
HDAC8-204ENST00000373560 CSF1RP07333 972 aa15.76■□□□□ 0.11
HDAC8-204ENST00000373560 GADL1Q6ZQY3 521 aa15.76■□□□□ 0.11
HDAC8-204ENST00000373560 MBIPQ9NS73 344 aa15.76■□□□□ 0.11
HDAC8-204ENST00000373560 A0A0G2JLL6 359 aaPredicted RBP15.75■□□□□ 0.11
HDAC8-204ENST00000373560 PLIN1O60240 522 aa15.75■□□□□ 0.11
HDAC8-204ENST00000373560 SLURP2P0DP57 97 aa15.75■□□□□ 0.11
HDAC8-204ENST00000373560 LMOD3Q0VAK6 560 aa15.75■□□□□ 0.11
HDAC8-204ENST00000373560 NOL9Q5SY16 702 aaKnown RBP15.75■□□□□ 0.11
HDAC8-204ENST00000373560 DCAF15Q66K64 600 aa15.75■□□□□ 0.11
HDAC8-204ENST00000373560 PRRT2Q7Z6L0 340 aaPredicted RBP15.75■□□□□ 0.11
HDAC8-204ENST00000373560 FAM83AQ86UY5 434 aa15.75■□□□□ 0.11
HDAC8-204ENST00000373560 CCDC146Q8IYE0 955 aa15.75■□□□□ 0.11
HDAC8-204ENST00000373560 ADAMTS19Q8TE59 1207 aa15.75■□□□□ 0.11
HDAC8-204ENST00000373560 RNF25Q96BH1 459 aaPredicted RBP15.75■□□□□ 0.11
HDAC8-204ENST00000373560 COA7Q96BR5 231 aa15.75■□□□□ 0.11
HDAC8-204ENST00000373560 GJD2Q9UKL4 321 aa15.75■□□□□ 0.11
HDAC8-204ENST00000373560 IQSEC3Q9UPP2 1182 aaPredicted RBP15.75■□□□□ 0.11
HDAC8-204ENST00000373560 LOC285556D6RIA3 1793 aa15.75■□□□□ 0.11
HDAC8-204ENST00000373560 CLSPNQ9HAW4 1339 aa15.74■□□□□ 0.11
HDAC8-204ENST00000373560 PI4KAP2A4QPH2 592 aa15.74■□□□□ 0.11
HDAC8-204ENST00000373560 MAP3K21Q5TCX8 1036 aa15.74■□□□□ 0.11
HDAC8-204ENST00000373560 APOBEC3HQ6NTF7 200 aaKnown RBP15.74■□□□□ 0.11
HDAC8-204ENST00000373560 CCDC84Q86UT8 332 aaPredicted RBP15.74■□□□□ 0.11
HDAC8-204ENST00000373560 PI4KAP1Q8N8J0 262 aa15.74■□□□□ 0.11
HDAC8-204ENST00000373560 PLA2G12BQ9BX93 195 aa15.74■□□□□ 0.11
HDAC8-204ENST00000373560 BDP1A6H8Y1 2624 aa15.74■□□□□ 0.11
HDAC8-204ENST00000373560 CXCL11O14625 94 aa15.73■□□□□ 0.11
HDAC8-204ENST00000373560 SMCR8Q8TEV9 937 aaPredicted RBP15.73■□□□□ 0.11
HDAC8-204ENST00000373560 ZNF594Q96JF6 807 aaPredicted RBP15.73■□□□□ 0.11
HDAC8-204ENST00000373560 CCND3P30281 292 aaPredicted RBP15.72■□□□□ 0.11
HDAC8-204ENST00000373560 GRIN2CQ14957 1233 aa15.72■□□□□ 0.11
HDAC8-204ENST00000373560 TREML2Q5T2D2 321 aa15.72■□□□□ 0.11
HDAC8-204ENST00000373560 LHX8Q68G74 356 aa15.72■□□□□ 0.11
HDAC8-204ENST00000373560 NECAB3Q96P71 396 aaPredicted RBP15.72■□□□□ 0.11
HDAC8-204ENST00000373560 LBHD1Q9BQE6 289 aaPredicted RBP15.72■□□□□ 0.11
HDAC8-204ENST00000373560 TCF20Q9UGU0 1960 aaKnown RBP15.72■□□□□ 0.11
HDAC8-204ENST00000373560 ATRNL1Q5VV63 1379 aa15.72■□□□□ 0.11
HDAC8-204ENST00000373560 RLFQ13129 1914 aa15.71■□□□□ 0.11
HDAC8-204ENST00000373560 ANKRD18BA2A2Z9 1011 aa15.71■□□□□ 0.11
HDAC8-204ENST00000373560 PEX10O60683 326 aa15.71■□□□□ 0.11
HDAC8-204ENST00000373560 TIE1P35590 1138 aa15.71■□□□□ 0.11
HDAC8-204ENST00000373560 PSEN1P49768 467 aa15.71■□□□□ 0.11
HDAC8-204ENST00000373560 TCP10Q12799 353 aa15.71■□□□□ 0.11
HDAC8-204ENST00000373560 CHAF1AQ13111 956 aaPredicted RBP15.71■□□□□ 0.11
HDAC8-204ENST00000373560 PDAP1Q13442 181 aaKnown RBP15.71■□□□□ 0.11
HDAC8-204ENST00000373560 KSR2Q6VAB6 950 aa15.71■□□□□ 0.11
HDAC8-204ENST00000373560 FAM84BQ96KN1 310 aaPredicted RBP15.71■□□□□ 0.11
HDAC8-204ENST00000373560 ZDHHC15Q96MV8 337 aa15.71■□□□□ 0.11
HDAC8-204ENST00000373560 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
HDAC8-204ENST00000373560 BMP2KQ9NSY1 1161 aaPredicted RBP15.71■□□□□ 0.11
HDAC8-204ENST00000373560 REV3LO60673 3130 aa15.7■□□□□ 0.1
HDAC8-204ENST00000373560 ATN1P54259 1190 aaPredicted RBP15.7■□□□□ 0.1
HDAC8-204ENST00000373560 SMAD3P84022 425 aaKnown RBP15.7■□□□□ 0.1
HDAC8-204ENST00000373560 NFIAQ12857 509 aa15.7■□□□□ 0.1
HDAC8-204ENST00000373560 TRIM26Q12899 539 aaPredicted RBP15.7■□□□□ 0.1
HDAC8-204ENST00000373560 FAM110CQ1W6H9 321 aa15.7■□□□□ 0.1
HDAC8-204ENST00000373560 C8orf58Q8NAV2 365 aa15.7■□□□□ 0.1
HDAC8-204ENST00000373560 PPM1EQ8WY54 764 aa15.7■□□□□ 0.1
HDAC8-204ENST00000373560 TEKT1Q969V4 418 aa15.7■□□□□ 0.1
HDAC8-204ENST00000373560 SNX27Q96L92 541 aa15.7■□□□□ 0.1
HDAC8-204ENST00000373560 UHRF1Q96T88 793 aaPredicted RBP15.7■□□□□ 0.1
HDAC8-204ENST00000373560 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
HDAC8-204ENST00000373560 TMOD2Q9NZR1 351 aa15.7■□□□□ 0.1
HDAC8-204ENST00000373560 AFG3L2Q9Y4W6 797 aa15.7■□□□□ 0.1
HDAC8-204ENST00000373560 ZHX2Q9Y6X8 837 aa15.7■□□□□ 0.1
HDAC8-204ENST00000373560 DDX58O95786 925 aaKnown RBP15.69■□□□□ 0.1
HDAC8-204ENST00000373560 CYP2B6P20813 491 aa15.69■□□□□ 0.1
HDAC8-204ENST00000373560 FKBP1CQ5VVH2 108 aa15.69■□□□□ 0.1
HDAC8-204ENST00000373560 ZFPM1Q8IX07 1006 aa15.69■□□□□ 0.1
HDAC8-204ENST00000373560 HOOK2Q96ED9 719 aa15.69■□□□□ 0.1
HDAC8-204ENST00000373560 SLC45A1Q9Y2W3 748 aa15.69■□□□□ 0.1
HDAC8-204ENST00000373560 PHF20L1A8MW92 1017 aa15.68■□□□□ 0.1
HDAC8-204ENST00000373560 PTPRAP18433 802 aa15.68■□□□□ 0.1
HDAC8-204ENST00000373560 HIBADHP31937 336 aaKnown RBP15.68■□□□□ 0.1
HDAC8-204ENST00000373560 FOXO4P98177 505 aa15.68■□□□□ 0.1
HDAC8-204ENST00000373560 CACNB2Q08289 660 aaPredicted RBP15.68■□□□□ 0.1
HDAC8-204ENST00000373560 GCKRQ14397 625 aa15.68■□□□□ 0.1
HDAC8-204ENST00000373560 G2E3Q7L622 706 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms