RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TPD52P55327 224 aaPredicted RBP15.95■□□□□ 0.14
LMX1B-202ENST00000373474 TRMT1LQ7Z2T5 733 aaKnown RBP15.95■□□□□ 0.14
LMX1B-202ENST00000373474 NAPGQ99747 312 aaPredicted RBP15.95■□□□□ 0.14
LMX1B-202ENST00000373474 NCOA5Q9HCD5 579 aaKnown RBP15.95■□□□□ 0.14
LMX1B-202ENST00000373474 CCT6AP40227 531 aaKnown RBP15.94■□□□□ 0.14
LMX1B-202ENST00000373474 PLCD1P51178 756 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 APPBP2Q92624 585 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 ACSBG1Q96GR2 724 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 TM6SF1Q9BZW5 370 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 XAGE2Q96GT9 111 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 NAP1L4Q99733 375 aaKnown RBP15.94■□□□□ 0.14
LMX1B-202ENST00000373474 TMEM63CQ9P1W3 806 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 ANGEL1Q9UNK9 670 aaKnown RBP15.94■□□□□ 0.14
LMX1B-202ENST00000373474 AFAP1L1Q8TED9 768 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 GTF3C6Q969F1 213 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 VCX3BQ9H321 246 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 MRVI1Q9Y6F6 885 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 SYNRGQ9UMZ2 1314 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 ZEB2O60315 1214 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 TIMM10P62072 90 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 TNNC1P63316 161 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 DENND2AQ9ULE3 1009 aa15.94■□□□□ 0.14
LMX1B-202ENST00000373474 TSNAXIP1Q2TAA8 658 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 SV2BQ7L1I2 683 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 KBTBD3Q8NAB2 608 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 FAM13AO94988 1023 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 PCK1P35558 622 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 TNNI2P48788 182 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 FAM173BQ6P4H8 233 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 INTS8Q75QN2 995 aaKnown RBP15.93■□□□□ 0.14
LMX1B-202ENST00000373474 GIGYF1O75420 1035 aaPredicted RBP15.93■□□□□ 0.14
LMX1B-202ENST00000373474 ATP5DP30049 168 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 RNF168Q8IYW5 571 aaPredicted RBP15.93■□□□□ 0.14
LMX1B-202ENST00000373474 PLIN2Q99541 437 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 VCXQ9H320 206 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 ZNF202O95125 648 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 PUM3Q15397 648 aaKnown RBP15.93■□□□□ 0.14
LMX1B-202ENST00000373474 MLKLQ8NB16 471 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 KLHDC4Q8TBB5 520 aa15.93■□□□□ 0.14
LMX1B-202ENST00000373474 CASQ2O14958 399 aaPredicted RBP15.92■□□□□ 0.14
LMX1B-202ENST00000373474 ITGA6P23229 1130 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 INPP5BP32019 993 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 ARHGAP25P42331 645 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 APBB1IPQ7Z5R6 666 aaPredicted RBP15.92■□□□□ 0.14
LMX1B-202ENST00000373474 C17orf53Q8N3J3 647 aaPredicted RBP15.92■□□□□ 0.14
LMX1B-202ENST00000373474 IFT81Q8WYA0 676 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 MTRF1LQ9UGC7 380 aaKnown RBP15.92■□□□□ 0.14
LMX1B-202ENST00000373474 PARP1P09874 1014 aaKnown RBP15.92■□□□□ 0.14
LMX1B-202ENST00000373474 PLCD3Q8N3E9 789 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 USH1CQ9Y6N9 552 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 TMEM110-MUSTN1A8MSY1 372 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 FMNL3Q8IVF7 1028 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 NOC4LQ9BVI4 516 aaKnown RBP15.92■□□□□ 0.14
LMX1B-202ENST00000373474 SSX2IPQ9Y2D8 614 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 SPDYE3A6NKU9 549 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 CFAP58Q5T655 872 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 TRMT2AQ8IZ69 625 aaKnown RBP15.92■□□□□ 0.14
LMX1B-202ENST00000373474 ZNF622Q969S3 477 aaKnown RBP eCLIP15.92■□□□□ 0.14
LMX1B-202ENST00000373474 ARMT1Q9H993 441 aa15.92■□□□□ 0.14
LMX1B-202ENST00000373474 GPAA1O43292 621 aa15.91■□□□□ 0.14
LMX1B-202ENST00000373474 BUB1BO60566 1050 aaPredicted RBP15.91■□□□□ 0.14
LMX1B-202ENST00000373474 LDHBP07195 334 aaKnown RBP15.91■□□□□ 0.14
LMX1B-202ENST00000373474 CABLES1Q8TDN4 633 aa15.91■□□□□ 0.14
LMX1B-202ENST00000373474 SEC62Q99442 399 aaKnown RBP15.91■□□□□ 0.14
LMX1B-202ENST00000373474 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.91■□□□□ 0.14
LMX1B-202ENST00000373474 F8W031 263 aaPredicted RBP15.91■□□□□ 0.14
LMX1B-202ENST00000373474 U2AF2P26368 475 aaKnown RBP eCLIP15.91■□□□□ 0.14
LMX1B-202ENST00000373474 JAKMIP2Q96AA8 810 aa15.91■□□□□ 0.14
LMX1B-202ENST00000373474 DSCC1Q9BVC3 393 aa15.91■□□□□ 0.14
LMX1B-202ENST00000373474 LGR6Q9HBX8 967 aa15.91■□□□□ 0.14
LMX1B-202ENST00000373474 POLR2DO15514 142 aaKnown RBP15.91■□□□□ 0.14
LMX1B-202ENST00000373474 PPP1R9BQ96SB3 815 aa15.91■□□□□ 0.14
LMX1B-202ENST00000373474 SLC52A2Q9HAB3 445 aa15.91■□□□□ 0.14
LMX1B-202ENST00000373474 CHMP4BP1P59074 171 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 ME3Q16798 604 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 PHACTR2O75167 634 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 VPS16Q9H269 839 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 CNNM4Q6P4Q7 775 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 CCDC65Q8IXS2 484 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 PSMC4P43686 418 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 KIAA1524Q8TCG1 905 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 PAK1Q13153 545 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 GCKRQ14397 625 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 ELF2Q15723 593 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 PIK3AP1Q6ZUJ8 805 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 TBX22Q9Y458 520 aa15.9■□□□□ 0.14
LMX1B-202ENST00000373474 FAM135BQ49AJ0 1406 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 ZNF853P0CG23 659 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 MPHOSPH6Q99547 160 aaKnown RBP15.89■□□□□ 0.13
LMX1B-202ENST00000373474 KDM6BO15054 1643 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 JAK2O60674 1132 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 PDE4DQ08499 809 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 CEP128Q6ZU80 1094 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 SYNCQ9H7C4 482 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 RGS12O14924 1447 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 ATP2A2P16615 1042 aaKnown RBP15.89■□□□□ 0.13
LMX1B-202ENST00000373474 EIF4A1P60842 406 aaKnown RBP15.89■□□□□ 0.13
LMX1B-202ENST00000373474 TPTE2Q6XPS3 522 aa15.89■□□□□ 0.13
LMX1B-202ENST00000373474 RGS22Q8NE09 1264 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms