RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 ARFGAP3Q9NP61 516 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 SNAP23O00161 211 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 PRDM1O75626 825 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 MBD4O95243 580 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 CCT6AP40227 531 aaKnown RBP13.78□□□□□ -0.2
NCDN-202ENST00000373243 PLA2G4AP47712 749 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 IQCB1Q15051 598 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 DIS3L2Q8IYB7 885 aaKnown RBP13.78□□□□□ -0.2
NCDN-202ENST00000373243 GRAMD1CQ8IYS0 662 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 SYNE4Q8N205 404 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 PLEKHA4Q9H4M7 779 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.78□□□□□ -0.2
NCDN-202ENST00000373243 SLC4A4Q9Y6R1 1079 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 NRKQ7Z2Y5 1582 aa13.78□□□□□ -0.2
NCDN-202ENST00000373243 BTBD18B2RXH4 712 aa13.77□□□□□ -0.2
NCDN-202ENST00000373243 N4BP3O15049 544 aa13.77□□□□□ -0.2
NCDN-202ENST00000373243 MUM1L1Q5H9M0 696 aa13.77□□□□□ -0.2
NCDN-202ENST00000373243 RNF217Q8TC41 542 aa13.77□□□□□ -0.2
NCDN-202ENST00000373243 WASF1Q92558 559 aa13.77□□□□□ -0.2
NCDN-202ENST00000373243 PCDHA5Q9Y5H7 936 aa13.77□□□□□ -0.2
NCDN-202ENST00000373243 REREQ9P2R6 1566 aa13.77□□□□□ -0.2
NCDN-202ENST00000373243 DNA2P51530 1060 aa13.77□□□□□ -0.21
NCDN-202ENST00000373243 C19orf44Q9H6X5 657 aa13.77□□□□□ -0.21
NCDN-202ENST00000373243 FHOD1Q9Y613 1164 aa13.77□□□□□ -0.21
NCDN-202ENST00000373243 ITGA6P23229 1130 aa13.77□□□□□ -0.21
NCDN-202ENST00000373243 ETF1P62495 437 aaKnown RBP13.77□□□□□ -0.21
NCDN-202ENST00000373243 ATL3Q6DD88 541 aa13.77□□□□□ -0.21
NCDN-202ENST00000373243 GOLGA5Q8TBA6 731 aa13.77□□□□□ -0.21
NCDN-202ENST00000373243 DLC1Q96QB1 1528 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 YEATS4O95619 227 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 SMC1AQ14683 1233 aaKnown RBP13.76□□□□□ -0.21
NCDN-202ENST00000373243 KRI1Q8N9T8 703 aaKnown RBP13.76□□□□□ -0.21
NCDN-202ENST00000373243 PLIN2Q99541 437 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 DONSONQ9NYP3 566 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 RTEL1Q9NZ71 1219 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 DNAJC10Q8IXB1 793 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 ZNF532Q9HCE3 1301 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 ZNF569Q5MCW4 686 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 HOMEZQ8IX15 550 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 GIMAP7Q8NHV1 300 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 PPM1EQ8WY54 764 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 JAG2Q9Y219 1238 aa13.76□□□□□ -0.21
NCDN-202ENST00000373243 EEF2KMTQ96G04 330 aa13.75□□□□□ -0.21
NCDN-202ENST00000373243 VPS18Q9P253 973 aa13.75□□□□□ -0.21
NCDN-202ENST00000373243 SERTAD1Q9UHV2 236 aa13.75□□□□□ -0.21
NCDN-202ENST00000373243 EIF3CLB5ME19 914 aaKnown RBP13.75□□□□□ -0.21
NCDN-202ENST00000373243 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
NCDN-202ENST00000373243 CTDNEP1O95476 244 aa13.75□□□□□ -0.21
NCDN-202ENST00000373243 MAGEA9P43362 315 aa13.75□□□□□ -0.21
NCDN-202ENST00000373243 EIF5P55010 431 aaKnown RBP13.75□□□□□ -0.21
NCDN-202ENST00000373243 DHX40Q8IX18 779 aaKnown RBP13.75□□□□□ -0.21
NCDN-202ENST00000373243 EIF3CQ99613 913 aaKnown RBP13.75□□□□□ -0.21
NCDN-202ENST00000373243 ZNF609O15014 1411 aa13.75□□□□□ -0.21
NCDN-202ENST00000373243 KIF20BQ96Q89 1820 aa13.75□□□□□ -0.21
NCDN-202ENST00000373243 USP42Q9H9J4 1324 aaKnown RBP13.75□□□□□ -0.21
NCDN-202ENST00000373243 TMEM232C9JQI7 657 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 CYP27B1O15528 508 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 SCARF1Q14162 830 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 ZNF174Q15697 407 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 IMPACTQ9P2X3 320 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 CCDC196A0A1B0GTZ2 297 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 NLRP5P59047 1200 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 PPP2R3AQ06190 1150 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 RRAGBQ5VZM2 374 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 MCTP2Q6DN12 878 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 FMR1NBQ8N0W7 255 aaPredicted RBP13.74□□□□□ -0.21
NCDN-202ENST00000373243 SRRTQ9BXP5 876 aaKnown RBP13.74□□□□□ -0.21
NCDN-202ENST00000373243 VPS16Q9H269 839 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 SLC24A3Q9HC58 644 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 CEP131Q9UPN4 1083 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 ERLIN1O75477 346 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 SLC5A1P13866 664 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 CYP7A1P22680 504 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 CMA1P23946 247 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 TXLNAP40222 546 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 SETQ01105 290 aaPredicted RBP13.74□□□□□ -0.21
NCDN-202ENST00000373243 KIAA1328Q86T90 577 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 CALR3Q96L12 384 aaKnown RBP13.74□□□□□ -0.21
NCDN-202ENST00000373243 MAGEC2Q9UBF1 373 aaPredicted RBP13.74□□□□□ -0.21
NCDN-202ENST00000373243 DENND2AQ9ULE3 1009 aa13.74□□□□□ -0.21
NCDN-202ENST00000373243 ERBB3P21860 1342 aa13.73□□□□□ -0.21
NCDN-202ENST00000373243 IGHMBP2P38935 993 aaKnown RBP13.73□□□□□ -0.21
NCDN-202ENST00000373243 KIF23Q02241 960 aaPredicted RBP13.73□□□□□ -0.21
NCDN-202ENST00000373243 TTF1Q15361 905 aaPredicted RBP13.73□□□□□ -0.21
NCDN-202ENST00000373243 HINFPQ9BQA5 517 aa13.73□□□□□ -0.21
NCDN-202ENST00000373243 VWA3AA6NCI4 1184 aa13.73□□□□□ -0.21
NCDN-202ENST00000373243 CCDC175P0C221 793 aa13.73□□□□□ -0.21
NCDN-202ENST00000373243 ENOX2Q16206 610 aaKnown RBP13.73□□□□□ -0.21
NCDN-202ENST00000373243 LRRN4CLQ8ND94 238 aa13.73□□□□□ -0.21
NCDN-202ENST00000373243 KNDC1Q76NI1 1749 aa13.73□□□□□ -0.21
NCDN-202ENST00000373243 IVLP07476 585 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 CALRP27797 417 aaKnown RBP13.72□□□□□ -0.21
NCDN-202ENST00000373243 MATR3P43243 847 aaKnown RBP eCLIP13.72□□□□□ -0.21
NCDN-202ENST00000373243 PDIA6Q15084 440 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 SMYD4Q8IYR2 804 aaPredicted RBP13.72□□□□□ -0.21
NCDN-202ENST00000373243 NOC3LQ8WTT2 800 aaKnown RBP13.72□□□□□ -0.21
NCDN-202ENST00000373243 DPF2Q92785 391 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 TRIM75PA6NK02 468 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 KIF28PB7ZC32 967 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 691.3 ms