RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 ZHX2Q9Y6X8 837 aa23.81■■□□□ 1.4
TRAPPC3-204ENST00000373166 RANBP2P49792 3224 aaKnown RBP23.81■■□□□ 1.4
TRAPPC3-204ENST00000373166 TRIOBPQ9H2D6 2365 aa23.8■■□□□ 1.4
TRAPPC3-204ENST00000373166 ATG9AQ7Z3C6 839 aa23.8■■□□□ 1.4
TRAPPC3-204ENST00000373166 ZFPM1Q8IX07 1006 aa23.8■■□□□ 1.4
TRAPPC3-204ENST00000373166 U2AF1L4Q8WU68 220 aaKnown RBP23.8■■□□□ 1.4
TRAPPC3-204ENST00000373166 ATF7IPQ6VMQ6 1270 aa23.79■■□□□ 1.4
TRAPPC3-204ENST00000373166 SCYL3Q8IZE3 742 aa23.79■■□□□ 1.4
TRAPPC3-204ENST00000373166 CEP126Q9P2H0 1117 aa23.79■■□□□ 1.4
TRAPPC3-204ENST00000373166 GABRQQ9UN88 632 aa23.79■■□□□ 1.4
TRAPPC3-204ENST00000373166 SALL1Q9NSC2 1324 aa23.79■■□□□ 1.4
TRAPPC3-204ENST00000373166 A0A0G2JLL6 359 aaPredicted RBP23.78■■□□□ 1.4
TRAPPC3-204ENST00000373166 PHF20L1A8MW92 1017 aa23.78■■□□□ 1.4
TRAPPC3-204ENST00000373166 SEMA3EO15041 775 aa23.78■■□□□ 1.4
TRAPPC3-204ENST00000373166 FARP2O94887 1054 aaPredicted RBP23.78■■□□□ 1.4
TRAPPC3-204ENST00000373166 TRIM27P14373 513 aa23.78■■□□□ 1.4
TRAPPC3-204ENST00000373166 ATP2B3Q16720 1220 aa23.78■■□□□ 1.4
TRAPPC3-204ENST00000373166 PRRT2Q7Z6L0 340 aaPredicted RBP23.78■■□□□ 1.4
TRAPPC3-204ENST00000373166 FBXO3Q9UK99 471 aa23.78■■□□□ 1.4
TRAPPC3-204ENST00000373166 DENND2AQ9ULE3 1009 aa23.78■■□□□ 1.4
TRAPPC3-204ENST00000373166 ADCY3O60266 1144 aa23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 ENTPD3O75355 529 aa23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 SGPL1O95470 568 aa23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 CAPN2P17655 700 aa23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 PTPRAP18433 802 aa23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 ZKSCAN2Q63HK3 967 aa23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 GADL1Q6ZQY3 521 aa23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 ZSCAN29Q8IWY8 852 aaPredicted RBP23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 IDI2Q9BXS1 227 aa23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 UNC93B1Q9H1C4 597 aa23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 SLC45A1Q9Y2W3 748 aa23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 LRRFIP2Q9Y608 721 aaKnown RBP23.77■■□□□ 1.4
TRAPPC3-204ENST00000373166 CIAO1O76071 339 aa23.76■■□□□ 1.39
TRAPPC3-204ENST00000373166 FLT3LGP49771 235 aa23.76■■□□□ 1.39
TRAPPC3-204ENST00000373166 RGS3P49796 1198 aa23.76■■□□□ 1.39
TRAPPC3-204ENST00000373166 ZGPATQ8N5A5 531 aaKnown RBP23.76■■□□□ 1.39
TRAPPC3-204ENST00000373166 SIL1Q9H173 461 aa23.76■■□□□ 1.39
TRAPPC3-204ENST00000373166 AFG3L2Q9Y4W6 797 aa23.76■■□□□ 1.39
TRAPPC3-204ENST00000373166 PXYLP1Q8TE99 480 aa23.75■■□□□ 1.39
TRAPPC3-204ENST00000373166 SMCR8Q8TEV9 937 aaPredicted RBP23.75■■□□□ 1.39
TRAPPC3-204ENST00000373166 MEIS3Q99687 375 aa23.75■■□□□ 1.39
TRAPPC3-204ENST00000373166 PRO3102Q9H379 93 aa23.75■■□□□ 1.39
TRAPPC3-204ENST00000373166 ATRNL1Q5VV63 1379 aa23.75■■□□□ 1.39
TRAPPC3-204ENST00000373166 TNPO2O14787 897 aaKnown RBP23.74■■□□□ 1.39
TRAPPC3-204ENST00000373166 ZBTB7BO15156 539 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC3-204ENST00000373166 TFRCP02786 760 aaKnown RBP23.74■■□□□ 1.39
TRAPPC3-204ENST00000373166 GNAI3P08754 354 aa23.74■■□□□ 1.39
TRAPPC3-204ENST00000373166 CLUAP1Q96AJ1 413 aa23.74■■□□□ 1.39
TRAPPC3-204ENST00000373166 CTNND1O60716 968 aaKnown RBP23.73■■□□□ 1.39
TRAPPC3-204ENST00000373166 INHAP05111 366 aa23.73■■□□□ 1.39
TRAPPC3-204ENST00000373166 ELNP15502 786 aa23.73■■□□□ 1.39
TRAPPC3-204ENST00000373166 PHKA1P46020 1223 aa23.73■■□□□ 1.39
TRAPPC3-204ENST00000373166 MAP3K10Q02779 954 aa23.73■■□□□ 1.39
TRAPPC3-204ENST00000373166 IRF5Q13568 498 aa23.73■■□□□ 1.39
TRAPPC3-204ENST00000373166 SLF2Q8IX21 1173 aa23.73■■□□□ 1.39
TRAPPC3-204ENST00000373166 EVI5O60447 810 aa23.72■■□□□ 1.39
TRAPPC3-204ENST00000373166 IL15P40933 162 aaPredicted RBP23.72■■□□□ 1.39
TRAPPC3-204ENST00000373166 SH3BP5LQ7L8J4 393 aa23.72■■□□□ 1.39
TRAPPC3-204ENST00000373166 DZIP1Q86YF9 867 aaKnown RBP23.72■■□□□ 1.39
TRAPPC3-204ENST00000373166 TNNQ9UQP3 1299 aa23.72■■□□□ 1.39
TRAPPC3-204ENST00000373166 GAKO14976 1311 aa23.72■■□□□ 1.39
TRAPPC3-204ENST00000373166 A0A1W2PPC1 479 aa23.71■■□□□ 1.39
TRAPPC3-204ENST00000373166 TRIM75PA6NK02 468 aa23.71■■□□□ 1.39
TRAPPC3-204ENST00000373166 ZBTB22O15209 634 aa23.71■■□□□ 1.39
TRAPPC3-204ENST00000373166 FTSJ3Q8IY81 847 aaKnown RBP23.71■■□□□ 1.39
TRAPPC3-204ENST00000373166 DEFB118Q96PH6 123 aa23.71■■□□□ 1.39
TRAPPC3-204ENST00000373166 CCDC102BQ68D86 513 aa23.7■■□□□ 1.38
TRAPPC3-204ENST00000373166 COA7Q96BR5 231 aa23.7■■□□□ 1.38
TRAPPC3-204ENST00000373166 FAM163AQ96GL9 167 aaPredicted RBP23.7■■□□□ 1.38
TRAPPC3-204ENST00000373166 ABCF2Q9UG63 623 aa23.7■■□□□ 1.38
TRAPPC3-204ENST00000373166 TAOK2Q9UL54 1235 aa23.7■■□□□ 1.38
TRAPPC3-204ENST00000373166 AGTPBP1Q9UPW5 1226 aa23.7■■□□□ 1.38
TRAPPC3-204ENST00000373166 DDTLA6NHG4 134 aaPredicted RBP23.69■■□□□ 1.38
TRAPPC3-204ENST00000373166 PICALMQ13492 652 aa23.69■■□□□ 1.38
TRAPPC3-204ENST00000373166 SPTY2D1Q68D10 685 aaPredicted RBP23.69■■□□□ 1.38
TRAPPC3-204ENST00000373166 PAK6Q9NQU5 681 aaPredicted RBP23.69■■□□□ 1.38
TRAPPC3-204ENST00000373166 AK9Q5TCS8 1911 aa23.69■■□□□ 1.38
TRAPPC3-204ENST00000373166 TMEM57Q8N5G2 664 aa23.68■■□□□ 1.38
TRAPPC3-204ENST00000373166 ANKRD13CQ8N6S4 541 aa23.68■■□□□ 1.38
TRAPPC3-204ENST00000373166 PNMA3Q9UL41 463 aa23.68■■□□□ 1.38
TRAPPC3-204ENST00000373166 RFX7Q2KHR2 1363 aa23.67■■□□□ 1.38
TRAPPC3-204ENST00000373166 ADORA1P30542 326 aa23.67■■□□□ 1.38
TRAPPC3-204ENST00000373166 BTDP43251 543 aa23.67■■□□□ 1.38
TRAPPC3-204ENST00000373166 DDX4Q9NQI0 724 aaKnown RBP23.67■■□□□ 1.38
TRAPPC3-204ENST00000373166 PDS5AQ29RF7 1337 aaKnown RBP23.66■■□□□ 1.38
TRAPPC3-204ENST00000373166 SLURP2P0DP57 97 aa23.66■■□□□ 1.38
TRAPPC3-204ENST00000373166 RASGRF1Q13972 1273 aa23.66■■□□□ 1.38
TRAPPC3-204ENST00000373166 CRISPLD2Q9H0B8 497 aa23.66■■□□□ 1.38
TRAPPC3-204ENST00000373166 PA2G4Q9UQ80 394 aaKnown RBP23.66■■□□□ 1.38
TRAPPC3-204ENST00000373166 MYH13Q9UKX3 1938 aa23.66■■□□□ 1.38
TRAPPC3-204ENST00000373166 TBC1D12O60347 775 aa23.65■■□□□ 1.38
TRAPPC3-204ENST00000373166 GNAI2P04899 355 aa23.65■■□□□ 1.38
TRAPPC3-204ENST00000373166 TIMM10P62072 90 aa23.65■■□□□ 1.38
TRAPPC3-204ENST00000373166 FAM110CQ1W6H9 321 aa23.65■■□□□ 1.38
TRAPPC3-204ENST00000373166 NECAB2Q7Z6G3 386 aa23.65■■□□□ 1.38
TRAPPC3-204ENST00000373166 PAWRQ96IZ0 340 aaKnown RBP23.65■■□□□ 1.38
TRAPPC3-204ENST00000373166 COPRSQ9NQ92 184 aa23.65■■□□□ 1.38
TRAPPC3-204ENST00000373166 MROH7-TTC4A0A0A0MT08 1334 aa23.64■■□□□ 1.38
TRAPPC3-204ENST00000373166 TREML2Q5T2D2 321 aa23.64■■□□□ 1.37
TRAPPC3-204ENST00000373166 CCDC84Q86UT8 332 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms