RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 MAST3O60307 1309 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 SLC8A1P32418 973 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 ARHGAP27Q6ZUM4 889 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 TSPYL6Q8N831 410 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 PLVAPQ9BX97 442 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 SSX2IPQ9Y2D8 614 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 GJB2P29033 226 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 EPSTI1Q96J88 318 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 LARSQ9P2J5 1176 aaKnown RBP15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 ZKSCAN5Q9Y2L8 839 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 PREX2Q70Z35 1606 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 KIAA0232Q92628 1395 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 THEGQ9P2T0 379 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 TXNDC9O14530 226 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 STX6O43752 255 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 LRSAM1Q6UWE0 723 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 KLHDC4Q8TBB5 520 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 SPAG5Q96R06 1193 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 SLC26A6Q9BXS9 759 aa15.78■□□□□ 0.12
RAPGEF1-202ENST00000372190 NDC80O14777 642 aa15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 PHACTR2O75167 634 aa15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 NOP2P46087 812 aaKnown RBP15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 MCMDC2Q4G0Z9 681 aa15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 GTF3C6Q969F1 213 aa15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 RAB3IPQ96QF0 476 aaPredicted RBP15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 GKAP1Q5VSY0 366 aaPredicted RBP15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 CCDC65Q8IXS2 484 aa15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 GDPD2Q9HCC8 539 aa15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 CCDC63Q8NA47 563 aa15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
RAPGEF1-202ENST00000372190 IGHDP01880 384 aa15.77■□□□□ 0.11
RAPGEF1-202ENST00000372190 HSP90AA5PQ58FG0 334 aa15.77■□□□□ 0.11
RAPGEF1-202ENST00000372190 UNC5CLQ8IV45 518 aa15.77■□□□□ 0.11
RAPGEF1-202ENST00000372190 NUCKS1Q9H1E3 243 aaKnown RBP15.77■□□□□ 0.11
RAPGEF1-202ENST00000372190 TTC22Q5TAA0 569 aa15.77■□□□□ 0.11
RAPGEF1-202ENST00000372190 TMOD4Q9NZQ9 345 aa15.77■□□□□ 0.11
RAPGEF1-202ENST00000372190 PPIP5K2O43314 1243 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 ATP2A2P16615 1042 aaKnown RBP15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 UBE2HP62256 183 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 FSIP1Q8NA03 581 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 MCUR1Q96AQ8 359 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 HOOK2Q96ED9 719 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 PHKG2P15735 406 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 HS1BP3Q53T59 392 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 RASIP1Q5U651 963 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 C2CD5Q86YS7 1000 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 TMTC2Q8N394 836 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 CALML4Q96GE6 196 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 ATP2A1O14983 1001 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 VAMP4O75379 141 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 MUM1Q2TAK8 710 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 TTC6Q86TZ1 520 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 PNMA8AQ86V59 439 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 SMARCC2Q8TAQ2 1214 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 ABTB1Q969K4 478 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 MRFAP1Q9Y605 127 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 PPFIA3O75145 1194 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 PUM3Q15397 648 aaKnown RBP15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 ARHGEF2Q92974 986 aaKnown RBP15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 SH2D4AQ9H788 454 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 FAN1Q9Y2M0 1017 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 HOXB7P09629 217 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 CA8P35219 290 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 IRX4P78413 519 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 ANKRD44Q8N8A2 993 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 TBC1D31Q96DN5 1066 aa15.76■□□□□ 0.11
RAPGEF1-202ENST00000372190 CTAGE9A4FU28 777 aa15.75■□□□□ 0.11
RAPGEF1-202ENST00000372190 CFAP157Q5JU67 520 aa15.75■□□□□ 0.11
RAPGEF1-202ENST00000372190 TEX11Q8IYF3 940 aa15.75■□□□□ 0.11
RAPGEF1-202ENST00000372190 GNAQP50148 359 aa15.75■□□□□ 0.11
RAPGEF1-202ENST00000372190 RNF113AO15541 343 aaKnown RBP15.75■□□□□ 0.11
RAPGEF1-202ENST00000372190 FYB2Q5VWT5 728 aa15.75■□□□□ 0.11
RAPGEF1-202ENST00000372190 MBD5Q9P267 1494 aa15.75■□□□□ 0.11
RAPGEF1-202ENST00000372190 HEATR3Q7Z4Q2 680 aa15.75■□□□□ 0.11
RAPGEF1-202ENST00000372190 TCP11L1Q9NUJ3 509 aa15.75■□□□□ 0.11
RAPGEF1-202ENST00000372190 SPECC1L-ADORA2AF8WAN1 911 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 VIMP08670 466 aaKnown RBP15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 CNNM3Q8NE01 707 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 GCC2Q8IWJ2 1684 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 ATP5DP30049 168 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 CARD10Q9BWT7 1032 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 SAP30BPQ9UHR5 308 aaKnown RBP15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 H7C1D1 291 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 PHLDB3Q6NSJ2 640 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 CERS3Q8IU89 383 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 CNPY4Q8N129 248 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 BAIAP2L1Q9UHR4 511 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 KCNK9Q9NPC2 374 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 TACC3Q9Y6A5 838 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 SKILP12757 684 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 GFAPP14136 432 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 TCIRG1Q13488 830 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 ATP2A3Q93084 1043 aa15.74■□□□□ 0.11
RAPGEF1-202ENST00000372190 VAV2P52735 878 aa15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 HVCN1Q96D96 273 aa15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 ZNF496Q96IT1 587 aaPredicted RBP15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 OPHN1O60890 802 aa15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 XRCC6P12956 609 aaKnown RBP eCLIP15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 ATICP31939 592 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms