RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 TGFBRAP1Q8WUH2 860 aa19.17■□□□□ 0.66
PFDN4-201ENST00000371419 AIDAQ96BJ3 306 aa19.17■□□□□ 0.66
PFDN4-201ENST00000371419 CRNKL1Q9BZJ0 848 aaKnown RBP19.17■□□□□ 0.66
PFDN4-201ENST00000371419 ARMT1Q9H993 441 aa19.17■□□□□ 0.66
PFDN4-201ENST00000371419 GBA2Q9HCG7 927 aaPredicted RBP19.17■□□□□ 0.66
PFDN4-201ENST00000371419 CREBZFQ9NS37 354 aa19.17■□□□□ 0.66
PFDN4-201ENST00000371419 FKBP1BP68106 108 aa19.16■□□□□ 0.66
PFDN4-201ENST00000371419 ZMYM1Q5SVZ6 1142 aa19.16■□□□□ 0.66
PFDN4-201ENST00000371419 MAPKAPK5Q8IW41 473 aa19.16■□□□□ 0.66
PFDN4-201ENST00000371419 OSBP2Q969R2 916 aa19.16■□□□□ 0.66
PFDN4-201ENST00000371419 HOOK2Q96ED9 719 aa19.16■□□□□ 0.66
PFDN4-201ENST00000371419 OSBPL5Q9H0X9 879 aaPredicted RBP19.16■□□□□ 0.66
PFDN4-201ENST00000371419 FLT1P17948 1338 aa19.16■□□□□ 0.66
PFDN4-201ENST00000371419 USP5P45974 858 aa19.16■□□□□ 0.66
PFDN4-201ENST00000371419 ZSCAN29Q8IWY8 852 aaPredicted RBP19.16■□□□□ 0.66
PFDN4-201ENST00000371419 SSC5DA1L4H1 1573 aa19.15■□□□□ 0.66
PFDN4-201ENST00000371419 PPP1R12BO60237 982 aaPredicted RBP19.15■□□□□ 0.66
PFDN4-201ENST00000371419 SDSP20132 328 aa19.15■□□□□ 0.66
PFDN4-201ENST00000371419 TTLL12Q14166 644 aaPredicted RBP19.15■□□□□ 0.66
PFDN4-201ENST00000371419 ABT1Q9ULW3 272 aaKnown RBP19.15■□□□□ 0.66
PFDN4-201ENST00000371419 COL2A1P02458 1487 aaPredicted RBP19.14■□□□□ 0.66
PFDN4-201ENST00000371419 ATRNL1Q5VV63 1379 aa19.14■□□□□ 0.65
PFDN4-201ENST00000371419 CDK5RAP2Q96SN8 1893 aa19.14■□□□□ 0.65
PFDN4-201ENST00000371419 SH3BP5LQ7L8J4 393 aa19.14■□□□□ 0.65
PFDN4-201ENST00000371419 CSRNP1Q96S65 589 aa19.14■□□□□ 0.65
PFDN4-201ENST00000371419 STRBPQ96SI9 672 aaKnown RBP19.14■□□□□ 0.65
PFDN4-201ENST00000371419 AK9Q5TCS8 1911 aa19.13■□□□□ 0.65
PFDN4-201ENST00000371419 FOCADQ5VW36 1801 aa19.13■□□□□ 0.65
PFDN4-201ENST00000371419 PAPPA2Q9BXP8 1791 aa19.13■□□□□ 0.65
PFDN4-201ENST00000371419 DDTLA6NHG4 134 aaPredicted RBP19.13■□□□□ 0.65
PFDN4-201ENST00000371419 M0R2C6 588 aa19.13■□□□□ 0.65
PFDN4-201ENST00000371419 HIP1O00291 1037 aa19.13■□□□□ 0.65
PFDN4-201ENST00000371419 GPAA1O43292 621 aa19.13■□□□□ 0.65
PFDN4-201ENST00000371419 PRKG1Q13976 671 aa19.13■□□□□ 0.65
PFDN4-201ENST00000371419 ARMC9Q7Z3E5 817 aa19.13■□□□□ 0.65
PFDN4-201ENST00000371419 SAPCD2Q86UD0 394 aa19.13■□□□□ 0.65
PFDN4-201ENST00000371419 SEC62Q99442 399 aaKnown RBP19.13■□□□□ 0.65
PFDN4-201ENST00000371419 DHX36Q9H2U1 1008 aaKnown RBP19.13■□□□□ 0.65
PFDN4-201ENST00000371419 HELLSQ9NRZ9 838 aa19.13■□□□□ 0.65
PFDN4-201ENST00000371419 TLL2Q9Y6L7 1015 aa19.13■□□□□ 0.65
PFDN4-201ENST00000371419 HTRA3P83110 453 aa19.12■□□□□ 0.65
PFDN4-201ENST00000371419 DCAF15Q66K64 600 aa19.12■□□□□ 0.65
PFDN4-201ENST00000371419 SDR42E1Q8WUS8 393 aa19.12■□□□□ 0.65
PFDN4-201ENST00000371419 DIAPH3Q9NSV4 1193 aa19.12■□□□□ 0.65
PFDN4-201ENST00000371419 ATP8A2Q9NTI2 1148 aa19.12■□□□□ 0.65
PFDN4-201ENST00000371419 ANGEL1Q9UNK9 670 aaKnown RBP19.12■□□□□ 0.65
PFDN4-201ENST00000371419 SLC4A4Q9Y6R1 1079 aa19.12■□□□□ 0.65
PFDN4-201ENST00000371419 PRKAB2O43741 272 aa19.11■□□□□ 0.65
PFDN4-201ENST00000371419 GNAT2P19087 354 aa19.11■□□□□ 0.65
PFDN4-201ENST00000371419 HUNKP57058 714 aa19.11■□□□□ 0.65
PFDN4-201ENST00000371419 NMIQ13287 307 aaPredicted RBP19.11■□□□□ 0.65
PFDN4-201ENST00000371419 MAP3K11Q16584 847 aa19.11■□□□□ 0.65
PFDN4-201ENST00000371419 MOB2Q70IA6 237 aa19.11■□□□□ 0.65
PFDN4-201ENST00000371419 FAM227BQ96M60 508 aa19.11■□□□□ 0.65
PFDN4-201ENST00000371419 MKRN1Q9UHC7 482 aaKnown RBP19.11■□□□□ 0.65
PFDN4-201ENST00000371419 SAP30BPQ9UHR5 308 aaKnown RBP19.11■□□□□ 0.65
PFDN4-201ENST00000371419 FZD1Q9UP38 647 aa19.11■□□□□ 0.65
PFDN4-201ENST00000371419 A0A0D9SFI3 127 aa19.1■□□□□ 0.65
PFDN4-201ENST00000371419 USP2O75604 605 aaPredicted RBP19.1■□□□□ 0.65
PFDN4-201ENST00000371419 IREB2P48200 963 aaKnown RBP19.1■□□□□ 0.65
PFDN4-201ENST00000371419 MCMDC2Q4G0Z9 681 aa19.1■□□□□ 0.65
PFDN4-201ENST00000371419 BMP2KLQ5H9B9 411 aa19.1■□□□□ 0.65
PFDN4-201ENST00000371419 MIGA2Q7L4E1 593 aa19.1■□□□□ 0.65
PFDN4-201ENST00000371419 DDRGK1Q96HY6 314 aa19.1■□□□□ 0.65
PFDN4-201ENST00000371419 DCP1AQ9NPI6 582 aaPredicted RBP19.1■□□□□ 0.65
PFDN4-201ENST00000371419 PI4KBQ9UBF8 816 aa19.1■□□□□ 0.65
PFDN4-201ENST00000371419 PALD1Q9ULE6 856 aa19.1■□□□□ 0.65
PFDN4-201ENST00000371419 UBE2Q2LH0YL09 131 aa19.09■□□□□ 0.65
PFDN4-201ENST00000371419 HLA-DOAP06340 250 aa19.09■□□□□ 0.65
PFDN4-201ENST00000371419 ZNF341Q9BYN7 854 aa19.09■□□□□ 0.65
PFDN4-201ENST00000371419 MCM9Q9NXL9 1143 aa19.09■□□□□ 0.65
PFDN4-201ENST00000371419 RASSF10A6NK89 507 aa19.09■□□□□ 0.65
PFDN4-201ENST00000371419 LDLRAD1Q5T700 205 aa19.09■□□□□ 0.65
PFDN4-201ENST00000371419 HHIPL1Q96JK4 782 aa19.09■□□□□ 0.65
PFDN4-201ENST00000371419 MYH1P12882 1939 aa19.08■□□□□ 0.65
PFDN4-201ENST00000371419 UNCXA6NJT0 531 aa19.08■□□□□ 0.64
PFDN4-201ENST00000371419 GSG1L2A8MUP6 293 aa19.08■□□□□ 0.64
PFDN4-201ENST00000371419 TBC1D12O60347 775 aa19.08■□□□□ 0.64
PFDN4-201ENST00000371419 POLR3DP05423 398 aaPredicted RBP19.08■□□□□ 0.64
PFDN4-201ENST00000371419 MAP3K10Q02779 954 aa19.08■□□□□ 0.64
PFDN4-201ENST00000371419 DEFB115Q30KQ5 88 aa19.08■□□□□ 0.64
PFDN4-201ENST00000371419 GIMAP6Q6P9H5 292 aa19.08■□□□□ 0.64
PFDN4-201ENST00000371419 CWC27Q6UX04 472 aaKnown RBP19.08■□□□□ 0.64
PFDN4-201ENST00000371419 CCDC129Q6ZRS4 1044 aa19.08■□□□□ 0.64
PFDN4-201ENST00000371419 TTC6Q86TZ1 520 aa19.08■□□□□ 0.64
PFDN4-201ENST00000371419 KLRG1Q96E93 195 aa19.08■□□□□ 0.64
PFDN4-201ENST00000371419 NAV1Q8NEY1 1877 aa19.07■□□□□ 0.64
PFDN4-201ENST00000371419 PATL2C9JE40 543 aaKnown RBP19.07■□□□□ 0.64
PFDN4-201ENST00000371419 APPP05067 770 aa19.07■□□□□ 0.64
PFDN4-201ENST00000371419 SLC4A8Q2Y0W8 1093 aa19.07■□□□□ 0.64
PFDN4-201ENST00000371419 FOXP4Q8IVH2 680 aaPredicted RBP19.07■□□□□ 0.64
PFDN4-201ENST00000371419 ANKRD13AQ8IZ07 590 aa19.07■□□□□ 0.64
PFDN4-201ENST00000371419 HERC5Q9UII4 1024 aaKnown RBP19.07■□□□□ 0.64
PFDN4-201ENST00000371419 CHMLP26374 656 aa19.06■□□□□ 0.64
PFDN4-201ENST00000371419 MFAP1P55081 439 aaKnown RBP19.06■□□□□ 0.64
PFDN4-201ENST00000371419 MAP3K9P80192 1104 aa19.06■□□□□ 0.64
PFDN4-201ENST00000371419 RGMBQ6NW40 437 aa19.06■□□□□ 0.64
PFDN4-201ENST00000371419 AMOTL1Q8IY63 956 aa19.06■□□□□ 0.64
PFDN4-201ENST00000371419 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.06■□□□□ 0.64
PFDN4-201ENST00000371419 WRNIP1Q96S55 665 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms