RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 VEZTQ9HBM0 779 aa12.98□□□□□ -0.33
EXOSC1-203ENST00000370886 SERPINA10Q9UK55 444 aa12.98□□□□□ -0.33
EXOSC1-203ENST00000370886 SUGT1Q9Y2Z0 365 aa12.98□□□□□ -0.33
EXOSC1-203ENST00000370886 PPP2R3BQ9Y5P8 575 aa12.98□□□□□ -0.33
EXOSC1-203ENST00000370886 A0A1B0GUL6 1792 aa12.98□□□□□ -0.33
EXOSC1-203ENST00000370886 TTC41PQ6P2S7 1318 aa12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 IGF2BP3O00425 579 aaKnown RBP eCLIP12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 MYO1BO43795 1136 aa12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 GLRX3O76003 335 aaKnown RBP12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 CYP7A1P22680 504 aa12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 GSTO1P78417 241 aa12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 SP3Q02447 781 aa12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 MAP3K12Q12852 859 aa12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 TTF1Q15361 905 aaPredicted RBP12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 ERICH6BQ5W0A0 696 aa12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 NBPF11Q86T75 865 aa12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 SKAP1Q86WV1 359 aa12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 SLF2Q8IX21 1173 aa12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 MAGEB6Q8N7X4 407 aa12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 TDRD3Q9H7E2 651 aaKnown RBP12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 COLQQ9Y215 455 aaPredicted RBP12.97□□□□□ -0.33
EXOSC1-203ENST00000370886 SPDYE2BA6NHP3 402 aa12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 TRIM6-TRIM34B2RNG4 842 aa12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 SPDYE6P0CI01 402 aa12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 PDE4AP27815 886 aa12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 CRHR2Q13324 411 aa12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 PLEKHM2Q8IWE5 1019 aa12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 PI4K2BQ8TCG2 481 aa12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 NSUN4Q96CB9 384 aaKnown RBP12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 ZNF333Q96JL9 665 aa12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 NOL10Q9BSC4 688 aaKnown RBP12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 DEFB129Q9H1M3 183 aa12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 USP40Q9NVE5 1235 aa12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 DAGLAQ9Y4D2 1042 aa12.96□□□□□ -0.33
EXOSC1-203ENST00000370886 AOX1Q06278 1338 aa12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 LDHCP07864 332 aa12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 IREB2P48200 963 aaKnown RBP12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 CACNB3P54284 484 aa12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 HDLBPQ00341 1268 aaKnown RBP12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 SLC4A8Q2Y0W8 1093 aa12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 SUPT20HL1Q3ZLR7 823 aa12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 SLC9C1Q4G0N8 1177 aa12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 SLC9C2Q5TAH2 1124 aa12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 HHIPL2Q6UWX4 724 aa12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 RILPL2Q969X0 211 aa12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 STAP2Q9UGK3 403 aa12.95□□□□□ -0.34
EXOSC1-203ENST00000370886 TCP10L2B9ZVM9 353 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 ZBTB22O15209 634 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 BTDP43251 543 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 RGS3P49796 1198 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 SLFNL1Q499Z3 407 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 APOBEC3HQ6NTF7 200 aaKnown RBP12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 MIGA1Q8NAN2 632 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 ZBED3Q96IU2 234 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 CLMNQ96JQ2 1002 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 ZDHHC15Q96MV8 337 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 FSD1Q9BTV5 496 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 TMOD2Q9NZR1 351 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 ZNF70Q9UC06 446 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 CUL9Q8IWT3 2517 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 SSC5DA1L4H1 1573 aa12.94□□□□□ -0.34
EXOSC1-203ENST00000370886 MROH7-TTC4A0A0A0MT08 1334 aa12.93□□□□□ -0.34
EXOSC1-203ENST00000370886 SALL3Q9BXA9 1300 aa12.93□□□□□ -0.34
EXOSC1-203ENST00000370886 PDE6AP16499 860 aa12.93□□□□□ -0.34
EXOSC1-203ENST00000370886 CDC42EP5Q6NZY7 148 aa12.93□□□□□ -0.34
EXOSC1-203ENST00000370886 ADGRA1Q86SQ6 560 aa12.93□□□□□ -0.34
EXOSC1-203ENST00000370886 ANKRD13AQ8IZ07 590 aa12.93□□□□□ -0.34
EXOSC1-203ENST00000370886 MTMR14Q8NCE2 650 aa12.93□□□□□ -0.34
EXOSC1-203ENST00000370886 ZNF384Q8TF68 577 aa12.93□□□□□ -0.34
EXOSC1-203ENST00000370886 MRIQ9BWK5 157 aa12.93□□□□□ -0.34
EXOSC1-203ENST00000370886 AATFQ9NY61 560 aaKnown RBP eCLIP12.93□□□□□ -0.34
EXOSC1-203ENST00000370886 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
EXOSC1-203ENST00000370886 ZNF532Q9HCE3 1301 aa12.92□□□□□ -0.34
EXOSC1-203ENST00000370886 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
EXOSC1-203ENST00000370886 BAG3O95817 575 aa12.92□□□□□ -0.34
EXOSC1-203ENST00000370886 CHGBP05060 677 aa12.92□□□□□ -0.34
EXOSC1-203ENST00000370886 DYNLL1P63167 89 aaKnown RBP12.92□□□□□ -0.34
EXOSC1-203ENST00000370886 TCP10Q12799 353 aa12.92□□□□□ -0.34
EXOSC1-203ENST00000370886 ZSCAN25Q6NSZ9 544 aa12.92□□□□□ -0.34
EXOSC1-203ENST00000370886 ARAP2Q8WZ64 1704 aa12.92□□□□□ -0.34
EXOSC1-203ENST00000370886 SZT2Q5T011 3432 aa12.92□□□□□ -0.34
EXOSC1-203ENST00000370886 OTOFQ9HC10 1997 aa12.91□□□□□ -0.34
EXOSC1-203ENST00000370886 H0YGN5 161 aa12.91□□□□□ -0.34
EXOSC1-203ENST00000370886 WDHD1O75717 1129 aaPredicted RBP12.91□□□□□ -0.34
EXOSC1-203ENST00000370886 PICALMQ13492 652 aa12.91□□□□□ -0.34
EXOSC1-203ENST00000370886 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
EXOSC1-203ENST00000370886 KBTBD3Q8NAB2 608 aa12.91□□□□□ -0.34
EXOSC1-203ENST00000370886 SH3RF3Q8TEJ3 882 aaPredicted RBP12.91□□□□□ -0.34
EXOSC1-203ENST00000370886 EVI5LQ96CN4 794 aa12.91□□□□□ -0.34
EXOSC1-203ENST00000370886 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
EXOSC1-203ENST00000370886 ZFYVE28Q9HCC9 887 aa12.91□□□□□ -0.34
EXOSC1-203ENST00000370886 PTCH2Q9Y6C5 1203 aa12.91□□□□□ -0.34
EXOSC1-203ENST00000370886 GAKO14976 1311 aa12.9□□□□□ -0.34
EXOSC1-203ENST00000370886 GPR75-ASB3A0A0A6YYF3 556 aa12.9□□□□□ -0.34
EXOSC1-203ENST00000370886 MAGEB6P1A0A0J9YX57 407 aa12.9□□□□□ -0.34
EXOSC1-203ENST00000370886 RNF113AO15541 343 aaKnown RBP12.9□□□□□ -0.34
EXOSC1-203ENST00000370886 ADD2P35612 726 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms