RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 ZNF341Q9BYN7 854 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 PIH1D3Q9NQM4 214 aaKnown RBP13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 HPS5Q9UPZ3 1129 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 CSADQ9Y600 493 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 NDUFB9Q9Y6M9 179 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 ZSWIM8A7E2V4 1837 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 BTBD19C9JJ37 291 aa13.52□□□□□ -0.25
EXOSC1-202ENST00000370885 ENTPD3O75355 529 aa13.52□□□□□ -0.25
EXOSC1-202ENST00000370885 ZAP70P43403 619 aa13.52□□□□□ -0.25
EXOSC1-202ENST00000370885 MAP3K10Q02779 954 aa13.52□□□□□ -0.25
EXOSC1-202ENST00000370885 OS9Q13438 667 aaPredicted RBP13.52□□□□□ -0.25
EXOSC1-202ENST00000370885 PICALMQ13492 652 aa13.52□□□□□ -0.25
EXOSC1-202ENST00000370885 DCAF15Q66K64 600 aa13.52□□□□□ -0.25
EXOSC1-202ENST00000370885 SPTY2D1Q68D10 685 aaPredicted RBP13.52□□□□□ -0.25
EXOSC1-202ENST00000370885 ZBTB40Q9NUA8 1239 aa13.52□□□□□ -0.25
EXOSC1-202ENST00000370885 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.25
EXOSC1-202ENST00000370885 BRCA2P51587 3418 aa13.52□□□□□ -0.25
EXOSC1-202ENST00000370885 FAM196BA6NMK8 535 aa13.51□□□□□ -0.25
EXOSC1-202ENST00000370885 UQCRFS1P1P0C7P4 283 aa13.51□□□□□ -0.25
EXOSC1-202ENST00000370885 GTF2A2P52657 109 aa13.51□□□□□ -0.25
EXOSC1-202ENST00000370885 SOX10P56693 466 aa13.51□□□□□ -0.25
EXOSC1-202ENST00000370885 PPIL2Q13356 520 aa13.51□□□□□ -0.25
EXOSC1-202ENST00000370885 RRP1BQ14684 758 aaKnown RBP13.51□□□□□ -0.25
EXOSC1-202ENST00000370885 CD99L2Q8TCZ2 262 aa13.51□□□□□ -0.25
EXOSC1-202ENST00000370885 RAI14Q9P0K7 980 aa13.51□□□□□ -0.25
EXOSC1-202ENST00000370885 RCAN3Q9UKA8 241 aa13.51□□□□□ -0.25
EXOSC1-202ENST00000370885 CDK5RAP2Q96SN8 1893 aa13.5□□□□□ -0.25
EXOSC1-202ENST00000370885 SIPA1L1O43166 1804 aa13.5□□□□□ -0.25
EXOSC1-202ENST00000370885 TTC39AQ5SRH9 613 aa13.5□□□□□ -0.25
EXOSC1-202ENST00000370885 NOL9Q5SY16 702 aaKnown RBP13.5□□□□□ -0.25
EXOSC1-202ENST00000370885 OTOP1Q7RTM1 612 aa13.5□□□□□ -0.25
EXOSC1-202ENST00000370885 CCDC84Q86UT8 332 aaPredicted RBP13.5□□□□□ -0.25
EXOSC1-202ENST00000370885 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.5□□□□□ -0.25
EXOSC1-202ENST00000370885 SH3RF3Q8TEJ3 882 aaPredicted RBP13.5□□□□□ -0.25
EXOSC1-202ENST00000370885 ZNF512BQ96KM6 892 aaPredicted RBP13.5□□□□□ -0.25
EXOSC1-202ENST00000370885 ANTXR1Q9H6X2 564 aa13.5□□□□□ -0.25
EXOSC1-202ENST00000370885 PHIPQ8WWQ0 1821 aa13.5□□□□□ -0.25
EXOSC1-202ENST00000370885 MKI67P46013 3256 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-202ENST00000370885 PPATQ06203 517 aa13.49□□□□□ -0.25
EXOSC1-202ENST00000370885 TAF1CQ15572 869 aaPredicted RBP13.49□□□□□ -0.25
EXOSC1-202ENST00000370885 HOOK2Q96ED9 719 aa13.49□□□□□ -0.25
EXOSC1-202ENST00000370885 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
EXOSC1-202ENST00000370885 LRP2BPQ9P2M1 347 aa13.49□□□□□ -0.25
EXOSC1-202ENST00000370885 KCNH4Q9UQ05 1017 aa13.49□□□□□ -0.25
EXOSC1-202ENST00000370885 MAST2Q6P0Q8 1798 aa13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 CETPP11597 493 aa13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 CTGFP29279 349 aa13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 SNAPC2Q13487 334 aa13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 CCDC158Q5M9N0 1113 aa13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 OTUD7BQ6GQQ9 843 aa13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 GPAT2Q6NUI2 795 aa13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 FBXO46Q6PJ61 603 aaPredicted RBP13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 ZSCAN29Q8IWY8 852 aaPredicted RBP13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 SLF2Q8IX21 1173 aa13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 ARHGAP39Q9C0H5 1083 aa13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 AATFQ9NY61 560 aaKnown RBP eCLIP13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 TRIM17Q9Y577 477 aa13.48□□□□□ -0.25
EXOSC1-202ENST00000370885 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 LDHCP07864 332 aa13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 PTPRAP18433 802 aa13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 DYNLL1P63167 89 aaKnown RBP13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 GSTO1P78417 241 aa13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 JAG1P78504 1218 aa13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 SP3Q02447 781 aa13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 PKN2Q16513 984 aaKnown RBP13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 NAA16Q6N069 864 aaPredicted RBP13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 AACSQ86V21 672 aa13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 RHPN1Q8TCX5 695 aa13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 OSBPL5Q9H0X9 879 aaPredicted RBP13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 PTPRFP10586 1907 aa13.47□□□□□ -0.25
EXOSC1-202ENST00000370885 DOCK1Q14185 1865 aa13.46□□□□□ -0.25
EXOSC1-202ENST00000370885 FOCADQ5VW36 1801 aa13.46□□□□□ -0.25
EXOSC1-202ENST00000370885 ADGRA2Q96PE1 1338 aa13.46□□□□□ -0.25
EXOSC1-202ENST00000370885 APBB1O00213 710 aa13.46□□□□□ -0.25
EXOSC1-202ENST00000370885 PPP4CP60510 307 aa13.46□□□□□ -0.25
EXOSC1-202ENST00000370885 SHROOM1Q2M3G4 852 aaPredicted RBP13.46□□□□□ -0.25
EXOSC1-202ENST00000370885 TEX11Q8IYF3 940 aa13.46□□□□□ -0.25
EXOSC1-202ENST00000370885 SCYL3Q8IZE3 742 aa13.46□□□□□ -0.25
EXOSC1-202ENST00000370885 DDX19BQ9UMR2 479 aa13.46□□□□□ -0.25
EXOSC1-202ENST00000370885 AFG3L2Q9Y4W6 797 aa13.46□□□□□ -0.25
EXOSC1-202ENST00000370885 ZHX2Q9Y6X8 837 aa13.46□□□□□ -0.25
EXOSC1-202ENST00000370885 TBC1D12O60347 775 aa13.45□□□□□ -0.26
EXOSC1-202ENST00000370885 TLR2O60603 784 aa13.45□□□□□ -0.26
EXOSC1-202ENST00000370885 MLLT1Q03111 559 aaPredicted RBP13.45□□□□□ -0.26
EXOSC1-202ENST00000370885 C17orf99Q6UX52 265 aa13.45□□□□□ -0.26
EXOSC1-202ENST00000370885 MAPKAPK5Q8IW41 473 aa13.45□□□□□ -0.26
EXOSC1-202ENST00000370885 RPAP2Q8IXW5 612 aaPredicted RBP13.45□□□□□ -0.26
EXOSC1-202ENST00000370885 DNAJC18Q9H819 358 aa13.45□□□□□ -0.26
EXOSC1-202ENST00000370885 ZFYVE28Q9HCC9 887 aa13.45□□□□□ -0.26
EXOSC1-202ENST00000370885 PTPN22Q9Y2R2 807 aa13.45□□□□□ -0.26
EXOSC1-202ENST00000370885 COL2A1P02458 1487 aaPredicted RBP13.44□□□□□ -0.26
EXOSC1-202ENST00000370885 PDHXO00330 501 aa13.44□□□□□ -0.26
EXOSC1-202ENST00000370885 CXCL11O14625 94 aa13.44□□□□□ -0.26
EXOSC1-202ENST00000370885 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
EXOSC1-202ENST00000370885 MS4A1P11836 297 aa13.44□□□□□ -0.26
EXOSC1-202ENST00000370885 CYP7A1P22680 504 aa13.44□□□□□ -0.26
EXOSC1-202ENST00000370885 ANKRD23Q86SG2 305 aa13.44□□□□□ -0.26
EXOSC1-202ENST00000370885 TGFBRAP1Q8WUH2 860 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms