RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 LACTBP83111 547 aaPredicted RBP19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 PPFIA1Q13136 1202 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 SUCLG2Q96I99 432 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 EDC4Q6P2E9 1401 aaKnown RBP19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 MYSM1Q5VVJ2 828 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 TRMT44Q8IYL2 757 aaKnown RBP19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 BICD1Q96G01 975 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 USP28Q96RU2 1077 aa19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 ZSWIM6Q9HCJ5 1215 aa19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 MTUS1Q9ULD2 1270 aa19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 VIMP08670 466 aaKnown RBP19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 SSH3Q8TE77 659 aa19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 EFCAB8A8MWE9 144 aa19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 ADKP55263 362 aaKnown RBP19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 PTH1RQ03431 593 aa19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 TRAF1Q13077 416 aa19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 SMC6Q96SB8 1091 aa19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 TPCN1Q9ULQ1 816 aa19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 ATP6V0A2Q9Y487 856 aa19.21■□□□□ 0.67
PTP4A1-201ENST00000370651 ARHGAP25P42331 645 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 SND1Q7KZF4 910 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 NOX5Q96PH1 765 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 KIAA0556O60303 1618 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 ZNF518AQ6AHZ1 1483 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 PPP1R7Q15435 360 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 PHKBQ93100 1093 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 SPATA24Q86W54 205 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 LRRC45Q96CN5 670 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 DCAF5Q96JK2 942 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 WWC3Q9ULE0 1092 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 NDUFB9Q9Y6M9 179 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 ZNF521Q96K83 1311 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 LETM2Q2VYF4 491 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 VWA3BQ502W6 1294 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 NBPF6Q5VWK0 638 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 CNNM4Q6P4Q7 775 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 NBPF5PQ86XG9 351 aaPredicted RBP19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 NBPF4Q96M43 638 aa19.2■□□□□ 0.66
PTP4A1-201ENST00000370651 PNOCQ13519 176 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 TTC38Q5R3I4 469 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 PIK3AP1Q6ZUJ8 805 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 V9GY48 417 aaPredicted RBP19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 PFKFB1P16118 471 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 GJC1P36383 396 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 MAP3K9P80192 1104 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 IP6K1Q92551 441 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 SERPINA10Q9UK55 444 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 FAM13AO94988 1023 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 RPL13P26373 211 aaKnown RBP19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 MAGEA1P43355 309 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 RNASE9P60153 205 aaKnown RBP19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 KIAA1524Q8TCG1 905 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 ABCC2Q92887 1545 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 E7EWF7 191 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 DMTNQ08495 405 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 CCDC65Q8IXS2 484 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 NAP1L3Q99457 506 aaPredicted RBP19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 SWAP70Q9UH65 585 aa19.19■□□□□ 0.66
PTP4A1-201ENST00000370651 EEF2P13639 858 aaKnown RBP19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 PLCB3Q01970 1234 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 RUFY4Q6ZNE9 571 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 FERMT1Q9BQL6 677 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 FMNL3Q8IVF7 1028 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 PLBD2Q8NHP8 589 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 CCDC51Q96ER9 411 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 RPGRIP1Q96KN7 1286 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 IFT74Q96LB3 600 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 DSCC1Q9BVC3 393 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 USP44Q9H0E7 712 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 NKIRAS1Q9NYS0 192 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 SBNO1A3KN83 1393 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 PAK2Q13177 524 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 DCAF17Q5H9S7 520 aaPredicted RBP19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 CCDC50Q8IVM0 306 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 XAGE2Q96GT9 111 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 STIM2Q9P246 746 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 PPP1R1BQ9UD71 204 aaPredicted RBP19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 WHAMMP3Q1A5X7 153 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 CABS1Q96KC9 395 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 NIP7Q9Y221 180 aaKnown RBP eCLIP19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 PPP2R2CQ9Y2T4 447 aa19.18■□□□□ 0.66
PTP4A1-201ENST00000370651 FAM135BQ49AJ0 1406 aa19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 ATP5JP18859 108 aa19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 SMARCC2Q8TAQ2 1214 aa19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 TSNARE1Q96NA8 513 aa19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 CEP83Q9Y592 693 aa19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 VGLL3A8MV65 326 aa19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 HMGB2P26583 209 aaKnown RBP19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 INTS8Q75QN2 995 aaKnown RBP19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 MYL10Q9BUA6 226 aa19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 ZNF790Q6PG37 636 aa19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 TDRD7Q8NHU6 1098 aaKnown RBP19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 NLRP3Q96P20 1036 aa19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 PSDA5PKW4 1024 aaPredicted RBP19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 SEL1L2Q5TEA6 688 aa19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 SYNCQ9H7C4 482 aa19.17■□□□□ 0.66
PTP4A1-201ENST00000370651 ACTN4O43707 911 aaKnown RBP19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 ZNF274Q96GC6 653 aaPredicted RBP19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 DESI2Q9BSY9 194 aa19.16■□□□□ 0.66
PTP4A1-201ENST00000370651 SAR1BQ9Y6B6 198 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms