RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 CACNB3P54284 484 aa15.21■□□□□ 0.03
EFNA1-201ENST00000368406 MAP3K11Q16584 847 aa15.21■□□□□ 0.03
EFNA1-201ENST00000368406 SLFNL1Q499Z3 407 aa15.21■□□□□ 0.03
EFNA1-201ENST00000368406 RGMBQ6NW40 437 aa15.21■□□□□ 0.03
EFNA1-201ENST00000368406 RUFY2Q8WXA3 655 aa15.21■□□□□ 0.03
EFNA1-201ENST00000368406 CCDC102AQ96A19 550 aa15.21■□□□□ 0.03
EFNA1-201ENST00000368406 TMEM39BQ9GZU3 492 aa15.21■□□□□ 0.03
EFNA1-201ENST00000368406 RPAP1Q9BWH6 1393 aaPredicted RBP15.21■□□□□ 0.03
EFNA1-201ENST00000368406 TCRBV5S4A2TA0A5A2 114 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
EFNA1-201ENST00000368406 MBD4O95243 580 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 CHGBP05060 677 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 RHBDL3P58872 404 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 PPP4CP60510 307 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 NMIQ13287 307 aaPredicted RBP15.2■□□□□ 0.02
EFNA1-201ENST00000368406 TTLL12Q14166 644 aaPredicted RBP15.2■□□□□ 0.02
EFNA1-201ENST00000368406 LDLRAD1Q5T700 205 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 CYP4F22Q6NT55 531 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 CWC27Q6UX04 472 aaKnown RBP15.2■□□□□ 0.02
EFNA1-201ENST00000368406 PAXIP1Q6ZW49 1069 aaPredicted RBP15.2■□□□□ 0.02
EFNA1-201ENST00000368406 ADGRA1Q86SQ6 560 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 TICAM2Q86XR7 235 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 CERS3Q8IU89 383 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 FAM151AQ8WW52 585 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 HOOK2Q96ED9 719 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 SSC5DA1L4H1 1573 aa15.2■□□□□ 0.02
EFNA1-201ENST00000368406 ENTPD3O75355 529 aa15.19■□□□□ 0.02
EFNA1-201ENST00000368406 MAP2K2P36507 400 aa15.19■□□□□ 0.02
EFNA1-201ENST00000368406 MFAP1P55081 439 aaKnown RBP15.19■□□□□ 0.02
EFNA1-201ENST00000368406 DYNLL1P63167 89 aaKnown RBP15.19■□□□□ 0.02
EFNA1-201ENST00000368406 NFIAQ12857 509 aa15.19■□□□□ 0.02
EFNA1-201ENST00000368406 MOB2Q70IA6 237 aa15.19■□□□□ 0.02
EFNA1-201ENST00000368406 TEX11Q8IYF3 940 aa15.19■□□□□ 0.02
EFNA1-201ENST00000368406 FAM227BQ96M60 508 aa15.19■□□□□ 0.02
EFNA1-201ENST00000368406 FAM198AQ9UFP1 575 aa15.19■□□□□ 0.02
EFNA1-201ENST00000368406 A0A0D9SFI3 127 aa15.18■□□□□ 0.02
EFNA1-201ENST00000368406 UBE2Q2LH0YL09 131 aa15.18■□□□□ 0.02
EFNA1-201ENST00000368406 M0R2C6 588 aa15.18■□□□□ 0.02
EFNA1-201ENST00000368406 WDHD1O75717 1129 aaPredicted RBP15.18■□□□□ 0.02
EFNA1-201ENST00000368406 USP5P45974 858 aa15.18■□□□□ 0.02
EFNA1-201ENST00000368406 IREB2P48200 963 aaKnown RBP15.18■□□□□ 0.02
EFNA1-201ENST00000368406 ZNF157P51786 506 aaPredicted RBP15.18■□□□□ 0.02
EFNA1-201ENST00000368406 NOGQ13253 232 aa15.18■□□□□ 0.02
EFNA1-201ENST00000368406 ZMYM1Q5SVZ6 1142 aa15.18■□□□□ 0.02
EFNA1-201ENST00000368406 SH3RF3Q8TEJ3 882 aaPredicted RBP15.18■□□□□ 0.02
EFNA1-201ENST00000368406 CRNKL1Q9BZJ0 848 aaKnown RBP15.18■□□□□ 0.02
EFNA1-201ENST00000368406 ARMT1Q9H993 441 aa15.18■□□□□ 0.02
EFNA1-201ENST00000368406 HELLSQ9NRZ9 838 aa15.18■□□□□ 0.02
EFNA1-201ENST00000368406 ANGEL1Q9UNK9 670 aaKnown RBP15.18■□□□□ 0.02
EFNA1-201ENST00000368406 NAV1Q8NEY1 1877 aa15.18■□□□□ 0.02
EFNA1-201ENST00000368406 FAM155AB1AL88 458 aaPredicted RBP15.17■□□□□ 0.02
EFNA1-201ENST00000368406 USP2O75604 605 aaPredicted RBP15.17■□□□□ 0.02
EFNA1-201ENST00000368406 CHMLP26374 656 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 PICALMQ13492 652 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 CDAN1Q8IWY9 1227 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 LCORLQ8N3X6 602 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 OSBP2Q969R2 916 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 DDRGK1Q96HY6 314 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 SEC62Q99442 399 aaKnown RBP15.17■□□□□ 0.02
EFNA1-201ENST00000368406 PUS7LQ9H0K6 701 aaKnown RBP15.17■□□□□ 0.02
EFNA1-201ENST00000368406 GPAA1O43292 621 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 APPP05067 770 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 TCP10Q12799 353 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 CCDC129Q6ZRS4 1044 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 SLC4A4Q9Y6R1 1079 aa15.17■□□□□ 0.02
EFNA1-201ENST00000368406 CDK5RAP2Q96SN8 1893 aa15.16■□□□□ 0.02
EFNA1-201ENST00000368406 RAD50Q92878 1312 aa15.16■□□□□ 0.02
EFNA1-201ENST00000368406 FOCADQ5VW36 1801 aa15.16■□□□□ 0.02
EFNA1-201ENST00000368406 SLC10A3P09131 477 aa15.16■□□□□ 0.02
EFNA1-201ENST00000368406 MAP2K1Q02750 393 aaPredicted RBP15.16■□□□□ 0.02
EFNA1-201ENST00000368406 PRKG1Q13976 671 aa15.16■□□□□ 0.02
EFNA1-201ENST00000368406 DCAF15Q66K64 600 aa15.16■□□□□ 0.02
EFNA1-201ENST00000368406 DDX4Q9NQI0 724 aaKnown RBP15.16■□□□□ 0.02
EFNA1-201ENST00000368406 THSD7BQ9C0I4 1608 aa15.16■□□□□ 0.02
EFNA1-201ENST00000368406 CCDC171Q6TFL3 1326 aa15.15■□□□□ 0.02
EFNA1-201ENST00000368406 GNAT2P19087 354 aa15.15■□□□□ 0.02
EFNA1-201ENST00000368406 GRM1Q13255 1194 aa15.15■□□□□ 0.02
EFNA1-201ENST00000368406 KIAA1211Q6ZU35 1233 aa15.15■□□□□ 0.02
EFNA1-201ENST00000368406 RASAL3Q86YV0 1011 aa15.15■□□□□ 0.02
EFNA1-201ENST00000368406 ZFPM1Q8IX07 1006 aa15.15■□□□□ 0.02
EFNA1-201ENST00000368406 REM2Q8IYK8 340 aaPredicted RBP15.15■□□□□ 0.02
EFNA1-201ENST00000368406 ANKRD13AQ8IZ07 590 aa15.15■□□□□ 0.02
EFNA1-201ENST00000368406 TGFBRAP1Q8WUH2 860 aa15.15■□□□□ 0.02
EFNA1-201ENST00000368406 RIOK1Q9BRS2 568 aaKnown RBP15.15■□□□□ 0.02
EFNA1-201ENST00000368406 FZD1Q9UP38 647 aa15.15■□□□□ 0.02
EFNA1-201ENST00000368406 ATRNL1Q5VV63 1379 aa15.14■□□□□ 0.01
EFNA1-201ENST00000368406 AOC2O75106 756 aa15.14■□□□□ 0.01
EFNA1-201ENST00000368406 MAP3K10Q02779 954 aa15.14■□□□□ 0.01
EFNA1-201ENST00000368406 MAPKAPK5Q8IW41 473 aa15.14■□□□□ 0.01
EFNA1-201ENST00000368406 AMOTL1Q8IY63 956 aa15.14■□□□□ 0.01
EFNA1-201ENST00000368406 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.14■□□□□ 0.014e-16■■■■□ 22.4
EFNA1-201ENST00000368406 SLC10A4Q96EP9 437 aa15.14■□□□□ 0.01
EFNA1-201ENST00000368406 NACAP1Q9BZK3 213 aa15.14■□□□□ 0.01
EFNA1-201ENST00000368406 WBP1LQ9NX94 342 aa15.14■□□□□ 0.01
EFNA1-201ENST00000368406 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
EFNA1-201ENST00000368406 TDO2P48775 406 aa15.13■□□□□ 0.01
EFNA1-201ENST00000368406 MAP3K9P80192 1104 aa15.13■□□□□ 0.01
EFNA1-201ENST00000368406 SH3BP5LQ7L8J4 393 aa15.13■□□□□ 0.01
EFNA1-201ENST00000368406 ZNF589Q86UQ0 364 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms