RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 TRAPPC3LQ5T215 181 aa14.33□□□□□ -0.12
LMNA-206ENST00000368300 DNAJC25Q9H1X3 360 aa14.33□□□□□ -0.12
LMNA-206ENST00000368300 RREB1Q92766 1687 aa14.33□□□□□ -0.12
LMNA-206ENST00000368300 GNAT2P19087 354 aa14.33□□□□□ -0.12
LMNA-206ENST00000368300 PRDX5P30044 214 aa14.33□□□□□ -0.12
LMNA-206ENST00000368300 TM4SF1P30408 202 aa14.33□□□□□ -0.12
LMNA-206ENST00000368300 GUCY1A2P33402 732 aa14.33□□□□□ -0.12
LMNA-206ENST00000368300 KIF23Q02241 960 aaPredicted RBP14.33□□□□□ -0.12
LMNA-206ENST00000368300 STK38Q15208 465 aa14.33□□□□□ -0.12
LMNA-206ENST00000368300 NTRK3Q16288 839 aa14.33□□□□□ -0.12
LMNA-206ENST00000368300 SEPT12Q8IYM1 358 aa14.33□□□□□ -0.12
LMNA-206ENST00000368300 RIOK1Q9BRS2 568 aaKnown RBP14.33□□□□□ -0.12
LMNA-206ENST00000368300 AFF2P51816 1311 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 IARSP41252 1262 aaKnown RBP14.32□□□□□ -0.12
LMNA-206ENST00000368300 SNW1Q13573 536 aaKnown RBP14.32□□□□□ -0.12
LMNA-206ENST00000368300 NFIXQ14938 502 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 MYSM1Q5VVJ2 828 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 KRT40Q6A162 431 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 FBXO33Q7Z6M2 555 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 CCDC39Q9UFE4 941 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 MARCKSP29966 332 aaPredicted RBP14.32□□□□□ -0.12
LMNA-206ENST00000368300 HIBADHP31937 336 aaKnown RBP14.32□□□□□ -0.12
LMNA-206ENST00000368300 SASS6Q6UVJ0 657 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 CCDC73Q6ZRK6 1079 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 SPC24Q8NBT2 197 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 LINC00301Q8NCQ3 95 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 KRT23Q9C075 422 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 CBX8Q9HC52 389 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 AATFQ9NY61 560 aaKnown RBP eCLIP14.32□□□□□ -0.12
LMNA-206ENST00000368300 MECOMQ03112 1051 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 WTAPQ15007 396 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 SYNE3Q6ZMZ3 975 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 STAG1Q8WVM7 1258 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 TTC12Q9H892 705 aaPredicted RBP14.32□□□□□ -0.12
LMNA-206ENST00000368300 CNNM2Q9H8M5 875 aa14.32□□□□□ -0.12
LMNA-206ENST00000368300 COL5A3P25940 1745 aaPredicted RBP14.32□□□□□ -0.12
LMNA-206ENST00000368300 HSPA1LP34931 641 aa14.31□□□□□ -0.12
LMNA-206ENST00000368300 GNL2Q13823 731 aaKnown RBP14.31□□□□□ -0.12
LMNA-206ENST00000368300 CPLX2Q6PUV4 134 aaKnown RBP14.31□□□□□ -0.12
LMNA-206ENST00000368300 SGMS1Q86VZ5 419 aa14.31□□□□□ -0.12
LMNA-206ENST00000368300 FAM200AQ8TCP9 573 aa14.31□□□□□ -0.12
LMNA-206ENST00000368300 RTEL1Q9NZ71 1219 aa14.31□□□□□ -0.12
LMNA-206ENST00000368300 ANKIB1Q9P2G1 1089 aa14.31□□□□□ -0.12
LMNA-206ENST00000368300 ZKSCAN5Q9Y2L8 839 aa14.31□□□□□ -0.12
LMNA-206ENST00000368300 HS1BP3Q53T59 392 aa14.31□□□□□ -0.12
LMNA-206ENST00000368300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.31□□□□□ -0.12
LMNA-206ENST00000368300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.3□□□□□ -0.12
LMNA-206ENST00000368300 LIFRP42702 1097 aa14.3□□□□□ -0.12
LMNA-206ENST00000368300 KCNJ14Q9UNX9 436 aa14.3□□□□□ -0.12
LMNA-206ENST00000368300 hCG_1642624A0A1W2PR95 340 aa14.3□□□□□ -0.12
LMNA-206ENST00000368300 USP17L12C9JPN9 530 aa14.3□□□□□ -0.12
LMNA-206ENST00000368300 USP17L21D6R901 530 aa14.3□□□□□ -0.12
LMNA-206ENST00000368300 NDUFA8P51970 172 aa14.3□□□□□ -0.12
LMNA-206ENST00000368300 NSUN4Q96CB9 384 aaKnown RBP14.3□□□□□ -0.12
LMNA-206ENST00000368300 SPTLC2O15270 562 aa14.3□□□□□ -0.12
LMNA-206ENST00000368300 KINO60870 393 aaKnown RBP14.3□□□□□ -0.12
LMNA-206ENST00000368300 CDKL5O76039 1030 aa14.3□□□□□ -0.12
LMNA-206ENST00000368300 RBM43Q6ZSC3 357 aaKnown RBP14.3□□□□□ -0.12
LMNA-206ENST00000368300 ENGASEQ8NFI3 743 aa14.3□□□□□ -0.12
LMNA-206ENST00000368300 UBAC1Q9BSL1 405 aa14.3□□□□□ -0.12
LMNA-206ENST00000368300 ERICH2A1L162 156 aa14.29□□□□□ -0.12
LMNA-206ENST00000368300 ZNF165P49910 485 aa14.29□□□□□ -0.12
LMNA-206ENST00000368300 SSRP1Q08945 709 aaKnown RBP14.29□□□□□ -0.12
LMNA-206ENST00000368300 CYP2D6P10635 497 aa14.29□□□□□ -0.12
LMNA-206ENST00000368300 FAM160A1Q05DH4 1040 aa14.29□□□□□ -0.12
LMNA-206ENST00000368300 SART3Q15020 963 aaKnown RBP14.29□□□□□ -0.12
LMNA-206ENST00000368300 RTN1Q16799 776 aa14.29□□□□□ -0.12
LMNA-206ENST00000368300 ANO1Q5XXA6 986 aa14.29□□□□□ -0.12
LMNA-206ENST00000368300 C17orf53Q8N3J3 647 aaPredicted RBP14.29□□□□□ -0.12
LMNA-206ENST00000368300 SPATA31A6Q5VVP1 1343 aa14.29□□□□□ -0.12
LMNA-206ENST00000368300 ARAP2Q8WZ64 1704 aa14.29□□□□□ -0.12
LMNA-206ENST00000368300 ATL3Q6DD88 541 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 C11orf57Q6ZUT1 292 aaPredicted RBP14.28□□□□□ -0.12
LMNA-206ENST00000368300 CNBD1Q8NA66 436 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 SDF4Q9BRK5 362 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 TNKSO95271 1327 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 WDHD1O75717 1129 aaPredicted RBP14.28□□□□□ -0.12
LMNA-206ENST00000368300 CTR9Q6PD62 1173 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 BRAPQ7Z569 592 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 ZNF654Q8IZM8 581 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 MRPS27Q92552 414 aaKnown RBP14.28□□□□□ -0.12
LMNA-206ENST00000368300 ANKRD2Q9GZV1 360 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 RNF41Q9H4P4 317 aaPredicted RBP14.28□□□□□ -0.12
LMNA-206ENST00000368300 R3HCC1Q9Y3T6 440 aaKnown RBP14.28□□□□□ -0.12
LMNA-206ENST00000368300 GOLGB1Q14789 3259 aaKnown RBP14.28□□□□□ -0.12
LMNA-206ENST00000368300 BTAF1O14981 1849 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 NMT2O60551 498 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 GRIK5Q16478 980 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 ADALQ6DHV7 355 aa14.28□□□□□ -0.12
LMNA-206ENST00000368300 BCORQ6W2J9 1755 aa14.27□□□□□ -0.12
LMNA-206ENST00000368300 BTBD18B2RXH4 712 aa14.27□□□□□ -0.12
LMNA-206ENST00000368300 TRIM29Q14134 588 aa14.27□□□□□ -0.12
LMNA-206ENST00000368300 FAM47AQ5JRC9 791 aa14.27□□□□□ -0.12
LMNA-206ENST00000368300 FMR1NBQ8N0W7 255 aaPredicted RBP14.27□□□□□ -0.12
LMNA-206ENST00000368300 POLR3EQ9NVU0 708 aa14.27□□□□□ -0.12
LMNA-206ENST00000368300 ATP2B1P20020 1258 aa14.27□□□□□ -0.13
LMNA-206ENST00000368300 FANCBQ8NB91 859 aa14.27□□□□□ -0.13
LMNA-206ENST00000368300 ESR2Q92731 530 aa14.27□□□□□ -0.13
LMNA-206ENST00000368300 CLIC6Q96NY7 704 aa14.27□□□□□ -0.13
LMNA-206ENST00000368300 ENAHQ8N8S7 591 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms