RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 USP17L12C9JPN9 530 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 USP17L21D6R901 530 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 POLR2DO15514 142 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 TFRCP02786 760 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 SLC5A1P13866 664 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 MAP3K12Q12852 859 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 GRIK5Q16478 980 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 TBC1D9BQ66K14 1250 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 DIS3L2Q8IYB7 885 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 RASSF8Q8NHQ8 419 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 ZNF396Q96N95 335 aaPredicted RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 STRBPQ96SI9 672 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 UBAC1Q9BSL1 405 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 ZMYND15Q9H091 742 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 BCL2L12Q9HB09 334 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 CCDC87Q9NVE4 849 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 ANKIB1Q9P2G1 1089 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 RBAK-RBAKDNI3L0D1 243 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 RIMBP2O15034 1052 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 DHX16O60231 1041 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 ZNF500O60304 480 aaPredicted RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 SYKP43405 635 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 KIF23Q02241 960 aaPredicted RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 PUM3Q15397 648 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 ANO1Q5XXA6 986 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 TRMT1LQ7Z2T5 733 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 TMEM87AQ8NBN3 555 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 LINC00301Q8NCQ3 95 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 KCNB2Q92953 911 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 EPSTI1Q96J88 318 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 DESI2Q9BSY9 194 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 DDX19AQ9NUU7 478 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 CTNNA3Q9UI47 895 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 SCAF8Q9UPN6 1271 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 OVOS2A0A0G2JMS6 1433 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 GSG1L2A8MUP6 293 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 USP17L8P0C7I0 530 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 CDK11BP21127 795 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 ADKP55263 362 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 FAM160A1Q05DH4 1040 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 PDE4BQ07343 736 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 WTAPQ15007 396 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 INTS5Q6P9B9 1019 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 ZNF710Q8N1W2 664 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 KIAA1524Q8TCG1 905 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 MXD3Q9BW11 206 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 STX8Q9UNK0 236 aa6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 COL5A2P05997 1499 aaPredicted RBP6.51□□□□□ -1.37
TNFSF4-202ENST00000367718 A0A0U1RQJ8 604 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 NBPF5PQ86XG9 351 aaPredicted RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 CEP57L1Q8IYX8 460 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 CNNM3Q8NE01 707 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 SMARCC2Q8TAQ2 1214 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 ATRIPQ8WXE1 791 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 POLD4Q9HCU8 107 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 FANCLQ9NW38 375 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 CHD2O14647 1828 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 NCAPD2Q15021 1401 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 SOS2Q07890 1332 aaPredicted RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 ERICH2A1L162 156 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 MCM7P33993 719 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 HMGN5P82970 282 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 KARSQ15046 597 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 STX1AQ16623 288 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 SHC4Q6S5L8 630 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 DHX40Q8IX18 779 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 GJA10Q969M2 543 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 ZFP91Q96JP5 570 aaPredicted RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 ST7Q9NRC1 585 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 SERTAD1Q9UHV2 236 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 LMTK3Q96Q04 1460 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 VWA3AA6NCI4 1184 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 PP2D1A8MPX8 630 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 GOLGA6L6A8MZA4 724 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 HMGB1P09429 215 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 AKAP17AQ02040 695 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 SSRP1Q08945 709 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 PICALMQ13492 652 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 RTN1Q16799 776 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 SYT10Q6XYQ8 523 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 FOXP4Q8IVH2 680 aaPredicted RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 LINC00116Q8NCU8 138 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 IRX2Q9BZI1 471 aaPredicted RBP6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 LY9Q9HBG7 655 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 PCDHA5Q9Y5H7 936 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 LRRC37A3O60309 1634 aa6.5□□□□□ -1.37
TNFSF4-202ENST00000367718 TNKSO95271 1327 aa6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 JCADQ9P266 1359 aa6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 USP17L3A6NCW0 530 aa6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 USP17L4A6NCW7 530 aa6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 FAM196BA6NMK8 535 aa6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 SH2B2O14492 632 aaPredicted RBP6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 LETM1O95202 739 aaPredicted RBP6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 CSF1RP07333 972 aa6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 CCT6AP40227 531 aaKnown RBP6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 NFIXQ14938 502 aa6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 IQCB1Q15051 598 aa6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 MSL1Q68DK7 614 aa6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 USP17L1Q7RTZ2 530 aa6.49□□□□□ -1.37
TNFSF4-202ENST00000367718 NBPF11Q86T75 865 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms