RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 INPP5BP32019 993 aa9.28□□□□□ -0.92
SHPRH-203ENST00000367505 KRT9P35527 623 aa9.28□□□□□ -0.92
SHPRH-203ENST00000367505 RBM6P78332 1123 aaKnown RBP9.28□□□□□ -0.92
SHPRH-203ENST00000367505 STK24Q9Y6E0 443 aa9.28□□□□□ -0.92
SHPRH-203ENST00000367505 FAM13AO94988 1023 aa9.27□□□□□ -0.92
SHPRH-203ENST00000367505 GSPT1P15170 499 aaKnown RBP9.27□□□□□ -0.92
SHPRH-203ENST00000367505 FAM173BQ6P4H8 233 aa9.27□□□□□ -0.92
SHPRH-203ENST00000367505 ZNF804AQ7Z570 1209 aa9.27□□□□□ -0.92
SHPRH-203ENST00000367505 CTNND2Q9UQB3 1225 aa9.27□□□□□ -0.92
SHPRH-203ENST00000367505 ARHGEF10O15013 1369 aa9.27□□□□□ -0.92
SHPRH-203ENST00000367505 GOLGA6BA6NDN3 693 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 ETF1P62495 437 aaKnown RBP9.27□□□□□ -0.93
SHPRH-203ENST00000367505 PAK2Q13177 524 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 TRIML1Q8N9V2 468 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 SECISBP2LQ93073 1101 aaKnown RBP9.27□□□□□ -0.93
SHPRH-203ENST00000367505 ANKRD2Q9GZV1 360 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 CSRNP2Q9H175 543 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 ZSWIM6Q9HCJ5 1215 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 EFCAB8A8MWE9 144 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 WHAMMP3Q1A5X7 153 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 CSGALNACT2Q8N6G5 542 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 BICD1Q96G01 975 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 VPS16Q9H269 839 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 OSBPL3Q9H4L5 887 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 WWC3Q9ULE0 1092 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 ATP6V0A2Q9Y487 856 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 TRIM7Q9C029 511 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 MCM9Q9NXL9 1143 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 NKIRAS1Q9NYS0 192 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 PSDA5PKW4 1024 aaPredicted RBP9.27□□□□□ -0.93
SHPRH-203ENST00000367505 SLC9C1Q4G0N8 1177 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 PAIP2Q9BPZ3 127 aaKnown RBP9.27□□□□□ -0.93
SHPRH-203ENST00000367505 DBNDD2Q9BQY9 259 aa9.27□□□□□ -0.93
SHPRH-203ENST00000367505 MBD4O95243 580 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 MRPL12P52815 198 aaKnown RBP9.26□□□□□ -0.93
SHPRH-203ENST00000367505 SF3B2Q13435 895 aaKnown RBP9.26□□□□□ -0.93
SHPRH-203ENST00000367505 SEL1L2Q5TEA6 688 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 ZNF790Q6PG37 636 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 MPHOSPH6Q99547 160 aaKnown RBP9.26□□□□□ -0.93
SHPRH-203ENST00000367505 DENND2AQ9ULE3 1009 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 MTMR6Q9Y217 621 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 TRAF5O00463 557 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 GPAA1O43292 621 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 ATP8B1O43520 1251 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 SMARCC2Q8TAQ2 1214 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 SETDB2Q96T68 719 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 XPO4Q9C0E2 1151 aaKnown RBP9.26□□□□□ -0.93
SHPRH-203ENST00000367505 USP19O94966 1318 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 B4E1Z4 1266 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 PDE4DQ08499 809 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 ME3Q16798 604 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 MRVI1Q9Y6F6 885 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 SAMD9Q5K651 1589 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 CDC25BP30305 580 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 KRT40Q6A162 431 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 C17orf53Q8N3J3 647 aaPredicted RBP9.26□□□□□ -0.93
SHPRH-203ENST00000367505 MSANTD4Q8NCY6 345 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 STAP2Q9UGK3 403 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.26□□□□□ -0.93
SHPRH-203ENST00000367505 TLDC2A0PJX2 215 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 GCP02774 474 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 OAS2P29728 719 aaKnown RBP9.26□□□□□ -0.93
SHPRH-203ENST00000367505 ST5P78524 1137 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 MTMR3Q13615 1198 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 PUM3Q15397 648 aaKnown RBP9.26□□□□□ -0.93
SHPRH-203ENST00000367505 ZNF174Q15697 407 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 TTC38Q5R3I4 469 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 MYSM1Q5VVJ2 828 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 GSTA5Q7RTV2 222 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 UBLCP1Q8WVY7 318 aaPredicted RBP9.26□□□□□ -0.93
SHPRH-203ENST00000367505 SYNCQ9H7C4 482 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 EPB41P11171 864 aaKnown RBP9.26□□□□□ -0.93
SHPRH-203ENST00000367505 TNNI2P48788 182 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 MXRA7P84157 204 aa9.26□□□□□ -0.93
SHPRH-203ENST00000367505 ZNF521Q96K83 1311 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 SYNMO15061 1565 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 IL2RBP14784 551 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 TIMM10P62072 90 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 PPP1R7Q15435 360 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 CFAP221Q4G0U5 840 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 SPATS2Q86XZ4 545 aaKnown RBP9.25□□□□□ -0.93
SHPRH-203ENST00000367505 DZIP3Q86Y13 1208 aaKnown RBP9.25□□□□□ -0.93
SHPRH-203ENST00000367505 PPFIBP2Q8ND30 876 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 NCOA5Q9HCD5 579 aaKnown RBP9.25□□□□□ -0.93
SHPRH-203ENST00000367505 NIP7Q9Y221 180 aaKnown RBP eCLIP9.25□□□□□ -0.93
SHPRH-203ENST00000367505 UTP11Q9Y3A2 253 aaKnown RBP9.25□□□□□ -0.93
SHPRH-203ENST00000367505 CHRNA2Q15822 529 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 RXRAP19793 462 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 CEBPAP49715 358 aaPredicted RBP9.25□□□□□ -0.93
SHPRH-203ENST00000367505 LRRC8AQ8IWT6 810 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 GPT2Q8TD30 523 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 TBX22Q9Y458 520 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 CEP83Q9Y592 693 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 CETN3O15182 167 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 PARP1P09874 1014 aaKnown RBP9.25□□□□□ -0.93
SHPRH-203ENST00000367505 LZTS2Q9BRK4 669 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 CMA1P23946 247 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 RFC4P35249 363 aa9.25□□□□□ -0.93
SHPRH-203ENST00000367505 INTS8Q75QN2 995 aaKnown RBP9.25□□□□□ -0.93
SHPRH-203ENST00000367505 ANTXR1Q9H6X2 564 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms