RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 FOXD4L6Q3SYB3 417 aaPredicted RBP12.79□□□□□ -0.36
H3F3A-202ENST00000366814 FOXD4L3Q6VB84 417 aaPredicted RBP12.79□□□□□ -0.36
H3F3A-202ENST00000366814 HS6ST3Q8IZP7 471 aa12.79□□□□□ -0.36
H3F3A-202ENST00000366814 GPC2Q8N158 579 aa12.79□□□□□ -0.36
H3F3A-202ENST00000366814 MAGEB6Q8N7X4 407 aa12.79□□□□□ -0.36
H3F3A-202ENST00000366814 LRRC2Q9BYS8 371 aa12.79□□□□□ -0.36
H3F3A-202ENST00000366814 ANKIB1Q9P2G1 1089 aa12.79□□□□□ -0.36
H3F3A-202ENST00000366814 LRP2BPQ9P2M1 347 aa12.79□□□□□ -0.36
H3F3A-202ENST00000366814 SCN4AP35499 1836 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 TCRBV5S4A2TA0A5A2 114 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 DHX16O60231 1041 aaKnown RBP12.78□□□□□ -0.36
H3F3A-202ENST00000366814 ZNF445P59923 1031 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 KIAA2012Q0VF49 1180 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
H3F3A-202ENST00000366814 GPT2Q8TD30 523 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 L3MBTL3Q96JM7 780 aaPredicted RBP12.78□□□□□ -0.36
H3F3A-202ENST00000366814 NACAP1Q9BZK3 213 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 HACL1Q9UJ83 578 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 DENND2AQ9ULE3 1009 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 ZNRF3Q9ULT6 936 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 NAP1L2Q9ULW6 460 aaPredicted RBP12.78□□□□□ -0.36
H3F3A-202ENST00000366814 H3BQV1 296 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 RIMBP2O15034 1052 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 FOXP2O15409 715 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 APOBRQ0VD83 1088 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 ALX1Q15699 326 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 ZSCAN23Q3MJ62 389 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 USP48Q86UV5 1035 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 NAPBQ9H115 298 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 MINPP1Q9UNW1 487 aa12.78□□□□□ -0.36
H3F3A-202ENST00000366814 COL4A1P02462 1669 aa12.77□□□□□ -0.36
H3F3A-202ENST00000366814 COL4A5P29400 1685 aa12.77□□□□□ -0.36
H3F3A-202ENST00000366814 ZNF804BA4D1E1 1349 aa12.77□□□□□ -0.36
H3F3A-202ENST00000366814 LRRC37AA6NMS7 1700 aa12.77□□□□□ -0.36
H3F3A-202ENST00000366814 PATL2C9JE40 543 aaKnown RBP12.77□□□□□ -0.37
H3F3A-202ENST00000366814 SNAP23O00161 211 aa12.77□□□□□ -0.37
H3F3A-202ENST00000366814 SEMA3EO15041 775 aa12.77□□□□□ -0.37
H3F3A-202ENST00000366814 PRC1O43663 620 aa12.77□□□□□ -0.37
H3F3A-202ENST00000366814 LMOD1P29536 600 aaPredicted RBP12.77□□□□□ -0.37
H3F3A-202ENST00000366814 KRT85P78386 507 aa12.77□□□□□ -0.37
H3F3A-202ENST00000366814 SCRN1Q12765 414 aa12.77□□□□□ -0.37
H3F3A-202ENST00000366814 EAPPQ56P03 285 aaPredicted RBP12.77□□□□□ -0.37
H3F3A-202ENST00000366814 ANP32BQ92688 251 aaKnown RBP12.77□□□□□ -0.37
H3F3A-202ENST00000366814 STRBPQ96SI9 672 aaKnown RBP12.77□□□□□ -0.37
H3F3A-202ENST00000366814 EYA3Q99504 573 aa12.77□□□□□ -0.37
H3F3A-202ENST00000366814 TAF1DQ9H5J8 278 aaPredicted RBP12.77□□□□□ -0.37
H3F3A-202ENST00000366814 POLLQ9UGP5 575 aa12.77□□□□□ -0.37
H3F3A-202ENST00000366814 CNPY2Q9Y2B0 182 aa12.77□□□□□ -0.37
H3F3A-202ENST00000366814 TCHHQ07283 1943 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 G3V3G9 751 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 MBD4O95243 580 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 XRCC6P12956 609 aaKnown RBP eCLIP12.76□□□□□ -0.37
H3F3A-202ENST00000366814 APLP1P51693 650 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 UBE2HP62256 183 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 MB21D2Q8IYB1 491 aaPredicted RBP12.76□□□□□ -0.37
H3F3A-202ENST00000366814 TBC1D16Q8TBP0 767 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 CHAMP1Q96JM3 812 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 RIOK3O14730 519 aaKnown RBP12.76□□□□□ -0.37
H3F3A-202ENST00000366814 FIBPO43427 364 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 EPHX2P34913 555 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 CXCL9Q07325 125 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 ZC3H12CQ9C0D7 883 aaKnown RBP12.76□□□□□ -0.37
H3F3A-202ENST00000366814 ZSCAN16Q9H4T2 348 aaPredicted RBP12.76□□□□□ -0.37
H3F3A-202ENST00000366814 CNNM2Q9H8M5 875 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 GGA1Q9UJY5 639 aa12.76□□□□□ -0.37
H3F3A-202ENST00000366814 RAD17O75943 681 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 UFL1O94874 794 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 PDIA3P30101 505 aaKnown RBP12.75□□□□□ -0.37
H3F3A-202ENST00000366814 GYG1P46976 350 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 EVCP57679 992 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 TNIP1Q15025 636 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 CIAPIN1Q6FI81 312 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 CDC37L1Q7L3B6 337 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 CHST3Q7LGC8 479 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 GPR101Q96P66 508 aaPredicted RBP12.75□□□□□ -0.37
H3F3A-202ENST00000366814 GDPD2Q9HCC8 539 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 PODXL2Q9NZ53 605 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 RAI14Q9P0K7 980 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 ABCF2Q9UG63 623 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 MYH13Q9UKX3 1938 aa12.75□□□□□ -0.37
H3F3A-202ENST00000366814 POTEIP0CG38 1075 aa12.74□□□□□ -0.37
H3F3A-202ENST00000366814 POTEJP0CG39 1038 aa12.74□□□□□ -0.37
H3F3A-202ENST00000366814 TDO2P48775 406 aa12.74□□□□□ -0.37
H3F3A-202ENST00000366814 DNM1Q05193 864 aaKnown RBP12.74□□□□□ -0.37
H3F3A-202ENST00000366814 DOK7Q18PE1 504 aa12.74□□□□□ -0.37
H3F3A-202ENST00000366814 PNMA8AQ86V59 439 aaPredicted RBP12.74□□□□□ -0.37
H3F3A-202ENST00000366814 IFNL3Q8IZI9 196 aa12.74□□□□□ -0.37
H3F3A-202ENST00000366814 NSUN7Q8NE18 718 aaKnown RBP12.74□□□□□ -0.37
H3F3A-202ENST00000366814 TMEM87BQ96K49 555 aa12.74□□□□□ -0.37
H3F3A-202ENST00000366814 SCAND2PQ9GZW5 306 aaPredicted RBP12.74□□□□□ -0.37
H3F3A-202ENST00000366814 DBNDD1Q9H9R9 158 aa12.74□□□□□ -0.37
H3F3A-202ENST00000366814 XDHP47989 1333 aa12.74□□□□□ -0.37
H3F3A-202ENST00000366814 PDS5AQ29RF7 1337 aaKnown RBP12.74□□□□□ -0.37
H3F3A-202ENST00000366814 PTPDC1A2A3K4 754 aa12.74□□□□□ -0.37
H3F3A-202ENST00000366814 JAK2O60674 1132 aa12.74□□□□□ -0.37
H3F3A-202ENST00000366814 LETM1O95202 739 aaPredicted RBP12.74□□□□□ -0.37
H3F3A-202ENST00000366814 CYP7A1P22680 504 aa12.74□□□□□ -0.37
H3F3A-202ENST00000366814 ATP2B4P23634 1241 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms