RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 ZBTB7CA1YPR0 619 aa11.19□□□□□ -0.62
H3F3A-201ENST00000366813 KCNQ2O43526 872 aa11.19□□□□□ -0.62
H3F3A-201ENST00000366813 RPLP1P05386 114 aaKnown RBP11.19□□□□□ -0.62
H3F3A-201ENST00000366813 PCSK2P16519 638 aa11.19□□□□□ -0.62
H3F3A-201ENST00000366813 ATP11AP98196 1134 aa11.19□□□□□ -0.62
H3F3A-201ENST00000366813 ELP3Q9H9T3 547 aa11.19□□□□□ -0.62
H3F3A-201ENST00000366813 METP08581 1390 aa11.19□□□□□ -0.62
H3F3A-201ENST00000366813 XRN1Q8IZH2 1706 aaKnown RBP11.19□□□□□ -0.62
H3F3A-201ENST00000366813 CDC27P30260 824 aa11.18□□□□□ -0.62
H3F3A-201ENST00000366813 CDC25BP30305 580 aa11.18□□□□□ -0.62
H3F3A-201ENST00000366813 ARTNQ5T4W7 220 aa11.18□□□□□ -0.62
H3F3A-201ENST00000366813 PDE12Q6L8Q7 609 aaKnown RBP11.18□□□□□ -0.62
H3F3A-201ENST00000366813 ZNF438Q7Z4V0 828 aa11.18□□□□□ -0.62
H3F3A-201ENST00000366813 GNEQ9Y223 722 aaKnown RBP11.18□□□□□ -0.62
H3F3A-201ENST00000366813 DISP2A7MBM2 1401 aa11.18□□□□□ -0.62
H3F3A-201ENST00000366813 NALCNQ8IZF0 1738 aa11.17□□□□□ -0.62
H3F3A-201ENST00000366813 F8W735 103 aaPredicted RBP11.17□□□□□ -0.62
H3F3A-201ENST00000366813 NBPF11Q86T75 865 aa11.17□□□□□ -0.62
H3F3A-201ENST00000366813 ATCAYQ86WG3 371 aa11.17□□□□□ -0.62
H3F3A-201ENST00000366813 RASSF4Q9H2L5 321 aa11.17□□□□□ -0.62
H3F3A-201ENST00000366813 RPRD2Q5VT52 1461 aaKnown RBP11.17□□□□□ -0.62
H3F3A-201ENST00000366813 CYP2E1P05181 493 aaPredicted RBP11.16□□□□□ -0.62
H3F3A-201ENST00000366813 DNM1Q05193 864 aaKnown RBP11.16□□□□□ -0.62
H3F3A-201ENST00000366813 FAM117BQ6P1L5 589 aa11.16□□□□□ -0.62
H3F3A-201ENST00000366813 CCER1Q8TC90 406 aaPredicted RBP11.16□□□□□ -0.62
H3F3A-201ENST00000366813 IVNS1ABPQ9Y6Y0 642 aa11.16□□□□□ -0.62
H3F3A-201ENST00000366813 NPHP3Q7Z494 1330 aa11.16□□□□□ -0.62
H3F3A-201ENST00000366813 TRIM37O94972 964 aa11.15□□□□□ -0.62
H3F3A-201ENST00000366813 NOM1Q5C9Z4 860 aaKnown RBP11.15□□□□□ -0.62
H3F3A-201ENST00000366813 EDEM1Q92611 657 aa11.15□□□□□ -0.62
H3F3A-201ENST00000366813 PBX4Q9BYU1 374 aa11.15□□□□□ -0.62
H3F3A-201ENST00000366813 RGPD1P0DJD0 1748 aa11.15□□□□□ -0.63
H3F3A-201ENST00000366813 KIF4AO95239 1232 aa11.14□□□□□ -0.63
H3F3A-201ENST00000366813 GLB1P16278 677 aa11.14□□□□□ -0.63
H3F3A-201ENST00000366813 NBPF8Q3BBV2 869 aa11.14□□□□□ -0.63
H3F3A-201ENST00000366813 C8orf34Q49A92 452 aa11.14□□□□□ -0.63
H3F3A-201ENST00000366813 TXNDC11Q6PKC3 985 aa11.14□□□□□ -0.63
H3F3A-201ENST00000366813 PRR23CQ6ZRP0 262 aa11.14□□□□□ -0.63
H3F3A-201ENST00000366813 DZIP1LQ8IYY4 767 aaKnown RBP11.14□□□□□ -0.63
H3F3A-201ENST00000366813 HELQQ8TDG4 1101 aa11.14□□□□□ -0.63
H3F3A-201ENST00000366813 TMEM63CQ9P1W3 806 aa11.14□□□□□ -0.63
H3F3A-201ENST00000366813 MTMR7Q9Y216 660 aa11.14□□□□□ -0.63
H3F3A-201ENST00000366813 PXDNQ92626 1479 aa11.14□□□□□ -0.63
H3F3A-201ENST00000366813 CD68P34810 354 aaPredicted RBP11.13□□□□□ -0.63
H3F3A-201ENST00000366813 AGGF1Q8N302 714 aaeCLIP11.13□□□□□ -0.63
H3F3A-201ENST00000366813 PTPRAP18433 802 aa11.12□□□□□ -0.63
H3F3A-201ENST00000366813 CES1P23141 567 aa11.12□□□□□ -0.63
H3F3A-201ENST00000366813 AAMPQ13685 434 aa11.12□□□□□ -0.63
H3F3A-201ENST00000366813 MYOM3Q5VTT5 1437 aa11.12□□□□□ -0.63
H3F3A-201ENST00000366813 CEP120Q8N960 986 aa11.12□□□□□ -0.63
H3F3A-201ENST00000366813 GALNT11Q8NCW6 608 aa11.12□□□□□ -0.63
H3F3A-201ENST00000366813 KANSL3Q9P2N6 904 aa11.12□□□□□ -0.63
H3F3A-201ENST00000366813 ABCC5O15440 1437 aa11.12□□□□□ -0.63
H3F3A-201ENST00000366813 SERPINB4P48594 390 aa11.11□□□□□ -0.63
H3F3A-201ENST00000366813 GTF3C2Q8WUA4 911 aaPredicted RBP11.11□□□□□ -0.63
H3F3A-201ENST00000366813 SH2B1Q9NRF2 756 aaPredicted RBP11.11□□□□□ -0.63
H3F3A-201ENST00000366813 CNTN3Q9P232 1028 aa11.11□□□□□ -0.63
H3F3A-201ENST00000366813 NRXN3Q9Y4C0 1643 aa11.11□□□□□ -0.63
H3F3A-201ENST00000366813 TNS1Q9HBL0 1735 aaKnown RBP11.11□□□□□ -0.63
H3F3A-201ENST00000366813 LRP8Q14114 963 aa11.1□□□□□ -0.63
H3F3A-201ENST00000366813 POP1Q99575 1024 aaKnown RBP11.1□□□□□ -0.63
H3F3A-201ENST00000366813 CARD10Q9BWT7 1032 aa11.1□□□□□ -0.63
H3F3A-201ENST00000366813 ADGRL2O95490 1459 aa11.1□□□□□ -0.63
H3F3A-201ENST00000366813 FAM83GA6ND36 823 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 FSCN2O14926 492 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 CABP4P57796 275 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 ALKBH2Q6NS38 261 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 XKR5Q6UX68 686 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 ACAD11Q709F0 780 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 C1orf127Q8N9H9 656 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 KLHL23Q8NBE8 558 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 PMEPA1Q969W9 287 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 SPATA31A3Q5VYP0 1347 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 USP32Q8NFA0 1604 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 ROBO2Q9HCK4 1378 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 HYAL3O43820 417 aaPredicted RBP11.09□□□□□ -0.63
H3F3A-201ENST00000366813 PDGFAP04085 211 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 MZF1P28698 734 aaPredicted RBP11.09□□□□□ -0.63
H3F3A-201ENST00000366813 EIF1AXP47813 144 aaKnown RBP11.09□□□□□ -0.63
H3F3A-201ENST00000366813 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.09□□□□□ -0.63
H3F3A-201ENST00000366813 SLC51AQ86UW1 340 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 GZF1Q9H116 711 aaPredicted RBP11.09□□□□□ -0.63
H3F3A-201ENST00000366813 GGNBP2Q9H3C7 697 aa11.09□□□□□ -0.63
H3F3A-201ENST00000366813 PARD3Q8TEW0 1356 aa11.08□□□□□ -0.64
H3F3A-201ENST00000366813 MPSTP25325 297 aa11.08□□□□□ -0.64
H3F3A-201ENST00000366813 DUOXA2Q1HG44 320 aa11.08□□□□□ -0.64
H3F3A-201ENST00000366813 SYT17Q9BSW7 474 aa11.08□□□□□ -0.64
H3F3A-201ENST00000366813 CEP41Q9BYV8 373 aa11.08□□□□□ -0.64
H3F3A-201ENST00000366813 PDGFDQ9GZP0 370 aaPredicted RBP11.08□□□□□ -0.64
H3F3A-201ENST00000366813 SEC31BQ9NQW1 1179 aa11.08□□□□□ -0.64
H3F3A-201ENST00000366813 EGFL7Q9UHF1 273 aa11.08□□□□□ -0.64
H3F3A-201ENST00000366813 SALL4Q9UJQ4 1053 aa11.08□□□□□ -0.64
H3F3A-201ENST00000366813 RNF112Q9ULX5 631 aa11.08□□□□□ -0.64
H3F3A-201ENST00000366813 A6NHS1 94 aa11.07□□□□□ -0.64
H3F3A-201ENST00000366813 FSTP19883 344 aa11.07□□□□□ -0.64
H3F3A-201ENST00000366813 EPHA1P21709 976 aa11.07□□□□□ -0.64
H3F3A-201ENST00000366813 CHD4Q14839 1912 aa11.06□□□□□ -0.64
H3F3A-201ENST00000366813 PTPN23Q9H3S7 1636 aa11.06□□□□□ -0.64
H3F3A-201ENST00000366813 ZBTB7AO95365 584 aa11.06□□□□□ -0.64
H3F3A-201ENST00000366813 ABL1P00519 1130 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms