RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 CCDC14Q49A88 953 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 SMARCA4P51532 1647 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 GCFC2P16383 781 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 KIF2CQ99661 725 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 MAK16Q9BXY0 300 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 CYP2C19P33261 490 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 GABPAQ06546 454 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 JAKMIP2Q96AA8 810 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 UBAP1Q9NZ09 502 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 LAMB3Q13751 1172 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 PPP2R5DQ14738 602 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 MPHOSPH6Q99547 160 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 GAS8O95995 478 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 SEPT10Q9P0V9 454 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 PPP2R2CQ9Y2T4 447 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 ADKP55263 362 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 PDCD7Q8N8D1 485 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 ADAM21Q9UKJ8 722 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 GIGYF1O75420 1035 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 FCHSD2O94868 740 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 SH3BGRP55822 239 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 MAP3K12Q12852 859 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 WDR75Q8IWA0 830 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 FBXO18Q8NFZ0 1043 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 SPAG5Q96R06 1193 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 SLF1Q9BQI6 1058 aa12.31□□□□□ -0.44
CDC42BPA-205ENST00000366769 HNRNPCP07910 306 aaKnown RBP eCLIP12.31□□□□□ -0.445e-6■■■□□ 16.4
CDC42BPA-205ENST00000366769 SLC5A1P13866 664 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 ARL10Q8N8L6 244 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 ACRBPQ8NEB7 543 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 ANTXR1Q9H6X2 564 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 ATP2A1O14983 1001 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 RABGGTAQ92696 567 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 RASSF2P50749 326 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 MICU3Q86XE3 530 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 PCYT1AP49585 367 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 TMEM67Q5HYA8 995 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 DENND2CQ68D51 928 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 CCDC197Q8NCU1 140 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 ZC4H2Q9NQZ6 224 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 MFSD4BQ5TF39 518 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 HAUS1Q96CS2 278 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 DONSONQ9NYP3 566 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 HAND2P61296 217 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 MORC2Q9Y6X9 1032 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 ANKRD42Q8N9B4 389 aa12.3□□□□□ -0.44
CDC42BPA-205ENST00000366769 VCX3AQ9NNX9 186 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 CD2APQ9Y5K6 639 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 C16orf87Q6PH81 154 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 PIP4K2CQ8TBX8 421 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 TSC22D4Q9Y3Q8 395 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 TTC41PQ6P2S7 1318 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 BICDL2A1A5D9 508 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 PTPN21Q16825 1174 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 KCNG4Q8TDN1 519 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 ZNF213O14771 459 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 PAK2Q13177 524 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 AFG3L2Q9Y4W6 797 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 A0A1B0GVL5 298 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 SLF2Q8IX21 1173 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 ANKFY1Q9P2R3 1169 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 NPHP3Q7Z494 1330 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 RPGRIP1LQ68CZ1 1315 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 ARHGAP42A6NI28 874 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 CACYBPQ9HB71 228 aaKnown RBP12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 CROCCQ5TZA2 2017 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 CCDC110Q8TBZ0 833 aa12.29□□□□□ -0.44
CDC42BPA-205ENST00000366769 FAM13AO94988 1023 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 DYNC1I2Q13409 638 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 KRT14P02533 472 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 SLC30A9Q6PML9 568 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 ERMNQ8TAM6 284 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 MYD88Q99836 296 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 ESYT1Q9BSJ8 1104 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 SLC26A6Q9BXS9 759 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 AATFQ9NY61 560 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 PAIP2BQ9ULR5 123 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 TPD52L2O43399 206 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 KRT83P78385 493 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 PHLDB3Q6NSJ2 640 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 AKAP2Q9Y2D5 859 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 HAUS2Q9NVX0 235 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 IFIT5Q13325 482 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 CCDC42Q96M95 316 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 CHCHD3Q9NX63 227 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 URB1O60287 2271 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 A6NNZ2 444 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 AP1G2O75843 785 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 AK2P54819 239 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 TUBB8Q3ZCM7 444 aa12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 TMA7Q9Y2S6 64 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-205ENST00000366769 EHBP1L1Q8N3D4 1523 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms