RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ZFYVE28Q9HCC9 887 aa7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 DCTN4Q9UJW0 460 aa7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 SETD1AO15047 1707 aaKnown RBP7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 JCADQ9P266 1359 aa7.84□□□□□ -1.15
RNU4-4P-201ENST00000364588 DIP2AQ14689 1571 aa7.84□□□□□ -1.15
RNU4-4P-201ENST00000364588 SPHKAPQ2M3C7 1700 aa7.84□□□□□ -1.15
RNU4-4P-201ENST00000364588 ACPPP15309 386 aa7.84□□□□□ -1.15
RNU4-4P-201ENST00000364588 EPHA1P21709 976 aa7.84□□□□□ -1.15
RNU4-4P-201ENST00000364588 KLHL23Q8NBE8 558 aa7.84□□□□□ -1.15
RNU4-4P-201ENST00000364588 BHLHE41Q9C0J9 482 aaPredicted RBP7.84□□□□□ -1.15
RNU4-4P-201ENST00000364588 TRPM2O94759 1503 aa7.83□□□□□ -1.16
RNU4-4P-201ENST00000364588 LINC01387J3KSC0 135 aa7.83□□□□□ -1.16
RNU4-4P-201ENST00000364588 K7ELQ4 463 aaPredicted RBP7.83□□□□□ -1.16
RNU4-4P-201ENST00000364588 NFKBIEO00221 500 aa7.83□□□□□ -1.16
RNU4-4P-201ENST00000364588 CPNE3O75131 537 aaKnown RBP7.83□□□□□ -1.16
RNU4-4P-201ENST00000364588 ATF3P18847 181 aa7.83□□□□□ -1.16
RNU4-4P-201ENST00000364588 BSNDQ8WZ55 320 aa7.83□□□□□ -1.16
RNU4-4P-201ENST00000364588 ALKBH8Q96BT7 664 aaKnown RBP7.83□□□□□ -1.16
RNU4-4P-201ENST00000364588 DNAJC25Q9H1X3 360 aa7.83□□□□□ -1.16
RNU4-4P-201ENST00000364588 IVNS1ABPQ9Y6Y0 642 aa7.83□□□□□ -1.16
RNU4-4P-201ENST00000364588 PTPRUQ92729 1446 aa7.83□□□□□ -1.16
RNU4-4P-201ENST00000364588 LRP6O75581 1613 aa7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 NRXN3Q9Y4C0 1643 aa7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 FSCN2O14926 492 aa7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 GPR182O15218 404 aa7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 ZNF326Q5BKZ1 582 aaKnown RBP7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 TXNDC11Q6PKC3 985 aa7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 GALNT12Q8IXK2 581 aa7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 C19orf44Q9H6X5 657 aa7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 SEC31BQ9NQW1 1179 aa7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 SOX13Q9UN79 622 aa7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 NCOA3Q9Y6Q9 1424 aa7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 PIK3R4Q99570 1358 aa7.82□□□□□ -1.16
RNU4-4P-201ENST00000364588 AHDC1Q5TGY3 1603 aaPredicted RBP7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 EIF4EBP3O60516 100 aaPredicted RBP7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 CD68P34810 354 aaPredicted RBP7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 DOC2BQ14184 412 aa7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 MEX3CQ5U5Q3 659 aaKnown RBP7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 PEAR1Q5VY43 1037 aaPredicted RBP7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 NXPE3Q969Y0 559 aa7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 HHIPQ96QV1 700 aa7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 AKTIPQ9H8T0 292 aa7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 OSGEPQ9NPF4 335 aa7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 SH2B1Q9NRF2 756 aaPredicted RBP7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 TPSG1Q9NRR2 321 aa7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 XRN1Q8IZH2 1706 aaKnown RBP7.81□□□□□ -1.16
RNU4-4P-201ENST00000364588 SETBP1Q9Y6X0 1596 aa7.8□□□□□ -1.16
RNU4-4P-201ENST00000364588 SHPRHQ149N8 1683 aa7.8□□□□□ -1.16
RNU4-4P-201ENST00000364588 ADAM23O75077 832 aa7.8□□□□□ -1.16
RNU4-4P-201ENST00000364588 ARL4DP49703 201 aa7.8□□□□□ -1.16
RNU4-4P-201ENST00000364588 ORC1Q13415 861 aa7.8□□□□□ -1.16
RNU4-4P-201ENST00000364588 BRINP3Q76B58 766 aa7.8□□□□□ -1.16
RNU4-4P-201ENST00000364588 TMEM130Q8N3G9 435 aa7.8□□□□□ -1.16
RNU4-4P-201ENST00000364588 WFDC12Q8WWY7 111 aa7.8□□□□□ -1.16
RNU4-4P-201ENST00000364588 LATS2Q9NRM7 1088 aa7.8□□□□□ -1.16
RNU4-4P-201ENST00000364588 CLTCL1P53675 1640 aa7.8□□□□□ -1.16
RNU4-4P-201ENST00000364588 METP08581 1390 aa7.8□□□□□ -1.16
RNU4-4P-201ENST00000364588 SPATA31A6Q5VVP1 1343 aa7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 TRPA1O75762 1119 aa7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 IGHA2P01877 340 aa7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 POLR3DP05423 398 aaPredicted RBP7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 FURINP09958 794 aa7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 MAPK1P28482 360 aa7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 CDC25BP30305 580 aa7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 FOXD4L6Q3SYB3 417 aaPredicted RBP7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 ADAMTSL4Q6UY14 1074 aa7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 FOXD4L3Q6VB84 417 aaPredicted RBP7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 GALNT11Q8NCW6 608 aa7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 ASAP3Q8TDY4 903 aa7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 CARD10Q9BWT7 1032 aa7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 KIF1BO60333 1816 aa7.79□□□□□ -1.16
RNU4-4P-201ENST00000364588 ASXL1Q8IXJ9 1541 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 F8W735 103 aaPredicted RBP7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 EIF1AYO14602 144 aaKnown RBP7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 NOS3P29474 1203 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 IREB2P48200 963 aaKnown RBP7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 IKBKEQ14164 716 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 SUZ12Q15022 739 aaKnown RBP7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 TMC7Q7Z402 723 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 CCNJLQ8IV13 435 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 NIF3L1Q9GZT8 377 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 LIN7BQ9HAP6 207 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 NPHS2Q9NP85 383 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 NALCNQ8IZF0 1738 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 NHSL1Q5SYE7 1610 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 NEXMIFQ5QGS0 1516 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 DCCP43146 1447 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 MST1RQ04912 1400 aa7.78□□□□□ -1.16
RNU4-4P-201ENST00000364588 A0A1W2PP55 124 aa7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 PDIA4P13667 645 aaKnown RBP7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 C19orf57Q0VDD7 668 aa7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 KIAA0319Q5VV43 1072 aa7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 ZNF772Q68DY9 489 aaPredicted RBP7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 Q6ZS46 218 aa7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 ACAD11Q709F0 780 aa7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 ZSCAN29Q8IWY8 852 aaPredicted RBP7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 SLC7A3Q8WY07 619 aa7.77□□□□□ -1.17
RNU4-4P-201ENST00000364588 DDX17Q92841 729 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms