RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 CUL4AQ13619 759 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 MAPKAPK5Q8IW41 473 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 MMP10P09238 476 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 SSRP1Q08945 709 aaKnown RBP10.58□□□□□ -0.72
CALD1-202ENST00000361901 TOB2Q14106 344 aaPredicted RBP10.58□□□□□ -0.72
CALD1-202ENST00000361901 IFIT1BQ5T764 474 aaKnown RBP10.58□□□□□ -0.72
CALD1-202ENST00000361901 TTC14Q96N46 770 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 KRT23Q9C075 422 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 EFCC1Q9HA90 598 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 ZDHHC9Q9Y397 364 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 UBE3CQ15386 1083 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 GTF3C6Q969F1 213 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 GJB4Q9NTQ9 266 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 ANGEL1Q9UNK9 670 aaKnown RBP10.58□□□□□ -0.72
CALD1-202ENST00000361901 AK9Q5TCS8 1911 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 CACNA1FO60840 1977 aa10.58□□□□□ -0.72
CALD1-202ENST00000361901 EPB41L2O43491 1005 aaKnown RBP10.57□□□□□ -0.72
CALD1-202ENST00000361901 ZNF772Q68DY9 489 aaPredicted RBP10.57□□□□□ -0.72
CALD1-202ENST00000361901 TGFBRAP1Q8WUH2 860 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 SCAND2PQ9GZW5 306 aaPredicted RBP10.57□□□□□ -0.72
CALD1-202ENST00000361901 PHRF1Q9P1Y6 1649 aaKnown RBP10.57□□□□□ -0.72
CALD1-202ENST00000361901 MARCH6O60337 910 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 LDHCP07864 332 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 XBP1P17861 261 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 MARCKSP29966 332 aaPredicted RBP10.57□□□□□ -0.72
CALD1-202ENST00000361901 TPD52L1Q16890 204 aaPredicted RBP10.57□□□□□ -0.72
CALD1-202ENST00000361901 MFSD14BQ5SR56 506 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 CATIPQ7Z7H3 387 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 CTCFLQ8NI51 663 aaPredicted RBP10.57□□□□□ -0.72
CALD1-202ENST00000361901 NUP62CLQ9H1M0 184 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 MTMR6Q9Y217 621 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 GOLGA6L19H0YKK7 550 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 PDE4BQ07343 736 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 RTN1Q16799 776 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 DPP8Q6V1X1 898 aaPredicted RBP10.57□□□□□ -0.72
CALD1-202ENST00000361901 EP400NLQ6ZTU2 488 aa10.57□□□□□ -0.72
CALD1-202ENST00000361901 FAM84BQ96KN1 310 aaPredicted RBP10.57□□□□□ -0.72
CALD1-202ENST00000361901 GNAT2P19087 354 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 SCNN1DP51172 638 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 RBM6P78332 1123 aaKnown RBP10.56□□□□□ -0.72
CALD1-202ENST00000361901 ISM2Q6H9L7 571 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 HOMER1Q86YM7 354 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 C16orf45Q96MC5 204 aaPredicted RBP10.56□□□□□ -0.72
CALD1-202ENST00000361901 STRBPQ96SI9 672 aaKnown RBP10.56□□□□□ -0.72
CALD1-202ENST00000361901 LRRC4BQ9NT99 713 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 PDIA3P30101 505 aaKnown RBP10.56□□□□□ -0.72
CALD1-202ENST00000361901 EN1Q05925 392 aaPredicted RBP10.56□□□□□ -0.72
CALD1-202ENST00000361901 AKNAD1Q5T1N1 836 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 CNNM2Q9H8M5 875 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 FAM208AQ9UK61 1670 aaKnown RBP10.56□□□□□ -0.72
CALD1-202ENST00000361901 EIF6P56537 245 aaKnown RBP10.56□□□□□ -0.72
CALD1-202ENST00000361901 UBE2HP62256 183 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
CALD1-202ENST00000361901 PPARAQ07869 468 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 PRR5LQ6MZQ0 368 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 TEX11Q8IYF3 940 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 RNF216Q9NWF9 866 aaPredicted RBP10.56□□□□□ -0.72
CALD1-202ENST00000361901 STK32BQ9NY57 414 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 DACT1Q9NYF0 836 aa10.56□□□□□ -0.72
CALD1-202ENST00000361901 TSPY3P0CV98 308 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 TSPY8P0CW00 308 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 SETQ01105 290 aaPredicted RBP10.55□□□□□ -0.72
CALD1-202ENST00000361901 TXNRD3Q86VQ6 643 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 TBC1D10CQ8IV04 446 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 TMEM63CQ9P1W3 806 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 MECOMQ03112 1051 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 GPT2Q8TD30 523 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 AIFM3Q96NN9 605 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 FTOQ9C0B1 505 aaKnown RBP eCLIP10.55□□□□□ -0.722e-6■■□□□ 12.1
CALD1-202ENST00000361901 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.55□□□□□ -0.72
CALD1-202ENST00000361901 V9GYY5 206 aaPredicted RBP10.55□□□□□ -0.72
CALD1-202ENST00000361901 GRAPQ13588 217 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 OLFM4Q6UX06 510 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 ZNF710Q8N1W2 664 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 NLGN1Q8N2Q7 840 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 FSIP1Q8NA03 581 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 GRAPLQ8TC17 118 aaPredicted RBP10.55□□□□□ -0.72
CALD1-202ENST00000361901 BRMS1Q9HCU9 246 aa10.55□□□□□ -0.72
CALD1-202ENST00000361901 BIN1O00499 593 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 TCP10Q12799 353 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 AMIGO3Q86WK7 504 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 KAT14Q9H8E8 782 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 DBNDD1Q9H9R9 158 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 ZSWIM5Q9P217 1185 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 MRC1P22897 1456 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 MARF1Q9Y4F3 1742 aaKnown RBP10.54□□□□□ -0.72
CALD1-202ENST00000361901 CCDC196A0A1B0GTZ2 297 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 TPM4P67936 248 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 TERF2Q15554 542 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 CCDC183Q5T5S1 534 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 RC3H1Q5TC82 1133 aaKnown RBP10.54□□□□□ -0.72
CALD1-202ENST00000361901 PDILTQ8N807 584 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 WDR66Q8TBY9 1149 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 MED23Q9ULK4 1368 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 H0YIN7 160 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 SF3B3Q15393 1217 aaKnown RBP10.54□□□□□ -0.72
CALD1-202ENST00000361901 SKIDA1Q1XH10 827 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 LRSAM1Q6UWE0 723 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 LEKR1Q6ZMV7 388 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 KIAA0825Q8IV33 1275 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms