RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 NPAS3Q8IXF0 933 aa7.3□□□□□ -1.24
RPL39-201ENST00000361575 LILRB2Q8N423 598 aa7.3□□□□□ -1.24
RPL39-201ENST00000361575 GALNT11Q8NCW6 608 aa7.3□□□□□ -1.24
RPL39-201ENST00000361575 DDX54Q8TDD1 881 aaKnown RBP7.3□□□□□ -1.24
RPL39-201ENST00000361575 WNT8BQ93098 351 aa7.3□□□□□ -1.24
RPL39-201ENST00000361575 KLHDC7BQ96G42 594 aa7.3□□□□□ -1.24
RPL39-201ENST00000361575 CCDC113Q9H0I3 377 aa7.3□□□□□ -1.24
RPL39-201ENST00000361575 KRT82Q9NSB4 513 aa7.3□□□□□ -1.24
RPL39-201ENST00000361575 GDF2Q9UK05 429 aaPredicted RBP7.3□□□□□ -1.24
RPL39-201ENST00000361575 PCDHA4Q9UN74 947 aa7.3□□□□□ -1.24
RPL39-201ENST00000361575 FAM177BA6PVY3 158 aa7.29□□□□□ -1.24
RPL39-201ENST00000361575 M0R082 166 aa7.29□□□□□ -1.24
RPL39-201ENST00000361575 U2SURPO15042 1029 aaKnown RBP7.29□□□□□ -1.24
RPL39-201ENST00000361575 ADAM11O75078 769 aa7.29□□□□□ -1.24
RPL39-201ENST00000361575 HTR3BO95264 441 aa7.29□□□□□ -1.24
RPL39-201ENST00000361575 SRSF11Q05519 484 aaKnown RBP7.29□□□□□ -1.24
RPL39-201ENST00000361575 ZNF417Q8TAU3 575 aa7.29□□□□□ -1.24
RPL39-201ENST00000361575 ZNF587Q96SQ5 575 aaPredicted RBP7.29□□□□□ -1.24
RPL39-201ENST00000361575 CRBNQ96SW2 442 aa7.29□□□□□ -1.24
RPL39-201ENST00000361575 OSGEPQ9NPF4 335 aa7.29□□□□□ -1.24
RPL39-201ENST00000361575 MAPK8IP1Q9UQF2 711 aa7.29□□□□□ -1.24
RPL39-201ENST00000361575 PCDHGC5Q9Y5F6 944 aa7.29□□□□□ -1.24
RPL39-201ENST00000361575 A0A1W2PQH9 124 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 UPK3BL1B0FP48 263 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 B2RBV5 119 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 UPK3BL2E5RIL1 263 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 CYP11A1P05108 521 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 HMGB1P09429 215 aaKnown RBP7.28□□□□□ -1.24
RPL39-201ENST00000361575 ACRP10323 421 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 HSD3B2P26439 372 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 MSL1Q68DK7 614 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 CHSY3Q70JA7 882 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 CYFIP1Q7L576 1253 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 C19orf47Q8N9M1 422 aaKnown RBP7.28□□□□□ -1.24
RPL39-201ENST00000361575 DNAJC7Q99615 494 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 CORO1BQ9BR76 489 aa7.28□□□□□ -1.24
RPL39-201ENST00000361575 R3HCC1Q9Y3T6 440 aaKnown RBP7.28□□□□□ -1.24
RPL39-201ENST00000361575 LOC100289279A0A1B0GTE1 492 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 SHISA8B8ZZ34 492 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 DDX3YO15523 660 aaKnown RBP7.27□□□□□ -1.25
RPL39-201ENST00000361575 LILRB5O75023 590 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 GJB6O95452 261 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 LIG1P18858 919 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 RASGRF1Q13972 1273 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 KIF4BQ2VIQ3 1234 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 LARP1BQ659C4 914 aaKnown RBP7.27□□□□□ -1.25
RPL39-201ENST00000361575 MRM1Q6IN84 353 aaKnown RBP7.27□□□□□ -1.25
RPL39-201ENST00000361575 TTC6Q86TZ1 520 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 TMEM40Q8WWA1 233 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 ACSBG1Q96GR2 724 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 GPATCH3Q96I76 525 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 KCNK4Q9NYG8 393 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 REV1Q9UBZ9 1251 aa7.27□□□□□ -1.25
RPL39-201ENST00000361575 PDPK1O15530 556 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 DEAF1O75398 565 aaPredicted RBP7.26□□□□□ -1.25
RPL39-201ENST00000361575 ADAMTS2O95450 1211 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 NID1P14543 1247 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 HOXB4P17483 251 aaPredicted RBP7.26□□□□□ -1.25
RPL39-201ENST00000361575 NLRP12P59046 1061 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 RING1Q06587 406 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 ZYXQ15942 572 aaKnown RBP7.26□□□□□ -1.25
RPL39-201ENST00000361575 FOXD4L6Q3SYB3 417 aaPredicted RBP7.26□□□□□ -1.25
RPL39-201ENST00000361575 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 OVOS1Q6IE37 1185 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 FOXD4L3Q6VB84 417 aaPredicted RBP7.26□□□□□ -1.25
RPL39-201ENST00000361575 WFDC8Q8IUA0 241 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 SH3TC2Q8TF17 1288 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 EDARADDQ8WWZ3 215 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 PRDM6Q9NQX0 595 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 SNCAIPQ9Y6H5 919 aa7.26□□□□□ -1.25
RPL39-201ENST00000361575 SLC22A31A6NKX4 558 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 DCDC2CA8MYV0 355 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 PPM1GO15355 546 aaPredicted RBP7.25□□□□□ -1.25
RPL39-201ENST00000361575 GUCY2CP25092 1073 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 ARL4DP49703 201 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 PPP2R5EQ16537 467 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 ZC3H12AQ5D1E8 599 aaKnown RBP7.25□□□□□ -1.25
RPL39-201ENST00000361575 FAM117BQ6P1L5 589 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 GALNT6Q8NCL4 622 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 BTBD6Q96KE9 485 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 TM9SF2Q99805 663 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 WDR18Q9BV38 432 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 USP26Q9BXU7 913 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 LTBP3Q9NS15 1303 aa7.25□□□□□ -1.25
RPL39-201ENST00000361575 OIP5O43482 229 aa7.24□□□□□ -1.25
RPL39-201ENST00000361575 NCLP19338 710 aaKnown RBP7.24□□□□□ -1.25
RPL39-201ENST00000361575 SQSTM1Q13501 440 aa7.24□□□□□ -1.25
RPL39-201ENST00000361575 PDE3AQ14432 1141 aa7.24□□□□□ -1.25
RPL39-201ENST00000361575 SUZ12Q15022 739 aaKnown RBP7.24□□□□□ -1.25
RPL39-201ENST00000361575 FXNQ16595 210 aa7.24□□□□□ -1.25
RPL39-201ENST00000361575 PLEKHG4Q58EX7 1191 aa7.24□□□□□ -1.25
RPL39-201ENST00000361575 TMEM201Q5SNT2 666 aa7.24□□□□□ -1.25
RPL39-201ENST00000361575 C6orf15Q6UXA7 325 aaPredicted RBP7.24□□□□□ -1.25
RPL39-201ENST00000361575 HDXQ7Z353 690 aa7.24□□□□□ -1.25
RPL39-201ENST00000361575 C12orf40Q86WS4 652 aa7.24□□□□□ -1.25
RPL39-201ENST00000361575 DMRTC2Q8IXT2 367 aaPredicted RBP7.24□□□□□ -1.25
RPL39-201ENST00000361575 TAB3Q8N5C8 712 aaPredicted RBP7.24□□□□□ -1.25
RPL39-201ENST00000361575 KLHL23Q8NBE8 558 aa7.24□□□□□ -1.25
RPL39-201ENST00000361575 ATG4CQ96DT6 458 aa7.24□□□□□ -1.25
RPL39-201ENST00000361575 GMIPQ9P107 970 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 968.5 ms