RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 PREX1Q8TCU6 1659 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 VWDEQ8N2E2 1590 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 ZSCAN9O15535 394 aaPredicted RBP13.09□□□□□ -0.31
CNOT4-203ENST00000361528 PYGLP06737 847 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 RPSAP08865 295 aaKnown RBP13.09□□□□□ -0.31
CNOT4-203ENST00000361528 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.31
CNOT4-203ENST00000361528 XRCC4Q13426 336 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 CCDC181Q5TID7 509 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 NAA35Q5VZE5 725 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 C6orf89Q6UWU4 347 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 CCDC121Q6ZUS5 278 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 NBPF15Q8N660 670 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 FSIP1Q8NA03 581 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 B4GALNT2Q8NHY0 566 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 ZNF526Q8TF50 670 aaPredicted RBP13.09□□□□□ -0.31
CNOT4-203ENST00000361528 MRPS27Q92552 414 aaKnown RBP13.09□□□□□ -0.31
CNOT4-203ENST00000361528 PPP1R12BO60237 982 aaPredicted RBP13.09□□□□□ -0.31
CNOT4-203ENST00000361528 KARSQ15046 597 aaKnown RBP13.09□□□□□ -0.31
CNOT4-203ENST00000361528 MTHFD1LQ6UB35 978 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 ARHGAP22Q7Z5H3 698 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 CNTROBQ8N137 903 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 EHD4Q9H223 541 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 QRICH2Q9H0J4 1663 aa13.09□□□□□ -0.31
CNOT4-203ENST00000361528 LUC7L3O95232 432 aaKnown RBP13.08□□□□□ -0.32
CNOT4-203ENST00000361528 CPA1P15085 419 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 LMOD1P29536 600 aaPredicted RBP13.08□□□□□ -0.32
CNOT4-203ENST00000361528 ADD1P35611 737 aaKnown RBP13.08□□□□□ -0.32
CNOT4-203ENST00000361528 MYL5Q02045 173 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 E2F5Q15329 346 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.32
CNOT4-203ENST00000361528 THEMIS2Q5TEJ8 643 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 UBE3BQ7Z3V4 1068 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 TC2NQ8N9U0 490 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 ZNF473Q8WTR7 871 aaKnown RBP13.08□□□□□ -0.32
CNOT4-203ENST00000361528 RIN2Q8WYP3 895 aaPredicted RBP13.08□□□□□ -0.32
CNOT4-203ENST00000361528 PANX2Q96RD6 677 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 C15orf41Q9Y2V0 281 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 GOLGA6L10A6NI86 522 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 SPDYE3A6NKU9 549 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 MAP4K4O95819 1239 aaPredicted RBP13.08□□□□□ -0.32
CNOT4-203ENST00000361528 NAA16Q6N069 864 aaPredicted RBP13.08□□□□□ -0.32
CNOT4-203ENST00000361528 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 KIRREL3Q8IZU9 778 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 HSD3B7Q9H2F3 369 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 MRPL44Q9H9J2 332 aaKnown RBP13.08□□□□□ -0.32
CNOT4-203ENST00000361528 PAPOLBQ9NRJ5 636 aaKnown RBP13.08□□□□□ -0.32
CNOT4-203ENST00000361528 ZNF232Q9UNY5 417 aa13.08□□□□□ -0.32
CNOT4-203ENST00000361528 ABCC6O95255 1503 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 LMTK2Q8IWU2 1503 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 H3BQV1 296 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 BUB1BO60566 1050 aaPredicted RBP13.07□□□□□ -0.32
CNOT4-203ENST00000361528 SASH1O94885 1247 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 GNAI2P04899 355 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 CCT4P50991 539 aaKnown RBP13.07□□□□□ -0.32
CNOT4-203ENST00000361528 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 LACTB2Q53H82 288 aaPredicted RBP13.07□□□□□ -0.32
CNOT4-203ENST00000361528 ZNF569Q5MCW4 686 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 IFFO2Q5TF58 517 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 ALS2CLQ60I27 953 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 MIPOL1Q8TD10 442 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 NSMCE1Q8WV22 266 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 TSPAN18Q96SJ8 248 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 SELENOOQ9BVL4 669 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 GOPCQ9HD26 462 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 TTF2Q9UNY4 1162 aaKnown RBP13.07□□□□□ -0.32
CNOT4-203ENST00000361528 CRYBG1Q9Y4K1 1723 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 MYH15Q9Y2K3 1946 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 ANKRD26Q9UPS8 1709 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 PYGBP11216 843 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 SFSWAPQ12872 951 aaKnown RBP13.07□□□□□ -0.32
CNOT4-203ENST00000361528 RIPK1Q13546 671 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 SPECC1LQ69YQ0 1117 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 ADALQ6DHV7 355 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 KDM7AQ6ZMT4 941 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 NOA1Q8NC60 698 aaKnown RBP13.07□□□□□ -0.32
CNOT4-203ENST00000361528 PIK3R5Q8WYR1 880 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 CUL5Q93034 780 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 ADGRG1Q9Y653 693 aa13.07□□□□□ -0.32
CNOT4-203ENST00000361528 CEMIPQ8WUJ3 1361 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 A0A087WWV3 80 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 A6NHS1 94 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 RAB11FIP3O75154 756 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 DNAJC8O75937 253 aaPredicted RBP13.06□□□□□ -0.32
CNOT4-203ENST00000361528 FAM107AO95990 144 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 SLC3A2P08195 630 aaKnown RBP13.06□□□□□ -0.32
CNOT4-203ENST00000361528 IBSPP21815 317 aaPredicted RBP13.06□□□□□ -0.32
CNOT4-203ENST00000361528 AKAP17AQ02040 695 aaKnown RBP13.06□□□□□ -0.32
CNOT4-203ENST00000361528 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
CNOT4-203ENST00000361528 BLMHQ13867 455 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 ADCK5Q3MIX3 580 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 GALNT15Q8N3T1 639 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 CCDC97Q96F63 343 aaPredicted RBP13.06□□□□□ -0.32
CNOT4-203ENST00000361528 ANKRD27Q96NW4 1050 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 EPAS1Q99814 870 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 TSGA10Q9BZW7 698 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 FAM184BQ9ULE4 1060 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 ZFYVE9O95405 1425 aa13.06□□□□□ -0.32
CNOT4-203ENST00000361528 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms