RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 TSPY26PQ9H489 355 aa13.53□□□□□ -0.24
HPS1-204ENST00000361490 PFKFB2O60825 505 aa13.52□□□□□ -0.24
HPS1-204ENST00000361490 DDIT3P35638 169 aa13.52□□□□□ -0.24
HPS1-204ENST00000361490 EVX2Q03828 476 aa13.52□□□□□ -0.24
HPS1-204ENST00000361490 CD209Q9NNX6 404 aa13.52□□□□□ -0.24
HPS1-204ENST00000361490 TNKSO95271 1327 aa13.52□□□□□ -0.24
HPS1-204ENST00000361490 UBE2Q2LH0YL09 131 aa13.52□□□□□ -0.25
HPS1-204ENST00000361490 KINO60870 393 aaKnown RBP13.52□□□□□ -0.25
HPS1-204ENST00000361490 BTDP43251 543 aa13.52□□□□□ -0.25
HPS1-204ENST00000361490 TFAP4Q01664 338 aa13.52□□□□□ -0.25
HPS1-204ENST00000361490 ADRA2BP18089 450 aa13.52□□□□□ -0.25
HPS1-204ENST00000361490 UBE2HP62256 183 aa13.52□□□□□ -0.25
HPS1-204ENST00000361490 ST3GAL1Q11201 340 aa13.52□□□□□ -0.25
HPS1-204ENST00000361490 SASS6Q6UVJ0 657 aa13.52□□□□□ -0.25
HPS1-204ENST00000361490 NUP62CLQ9H1M0 184 aa13.52□□□□□ -0.25
HPS1-204ENST00000361490 C21orf2O43822 256 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 APOA5Q6Q788 366 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 SH3RF3Q8TEJ3 882 aaPredicted RBP13.51□□□□□ -0.25
HPS1-204ENST00000361490 KAT14Q9H8E8 782 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 LEMD3Q9Y2U8 911 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 V9GY48 417 aaPredicted RBP13.51□□□□□ -0.25
HPS1-204ENST00000361490 BBOX1O75936 387 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 PDILTQ8N807 584 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 BIN1O00499 593 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 ATP2B4P23634 1241 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 PDE6BP35913 854 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 BAG6P46379 1132 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 GRIK5Q16478 980 aa13.51□□□□□ -0.25
HPS1-204ENST00000361490 COL16A1Q07092 1604 aaPredicted RBP13.5□□□□□ -0.25
HPS1-204ENST00000361490 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 ANTXR2P58335 489 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 SPECC1Q5M775 1068 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 SLC10A5Q5PT55 438 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 POTEAQ6S8J7 498 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 NSUN4Q96CB9 384 aaKnown RBP13.5□□□□□ -0.25
HPS1-204ENST00000361490 PDGFDQ9GZP0 370 aaPredicted RBP13.5□□□□□ -0.25
HPS1-204ENST00000361490 GOLGA8HP0CJ92 632 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 XBP1P17861 261 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 GSTO1P78417 241 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 FSIP1Q8NA03 581 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 BAZ2BQ9UIF8 2168 aaKnown RBP13.5□□□□□ -0.25
HPS1-204ENST00000361490 BECN2A8MW95 431 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 ALDH1B1P30837 517 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 MB21D2Q8IYB1 491 aaPredicted RBP13.5□□□□□ -0.25
HPS1-204ENST00000361490 POLLQ9UGP5 575 aa13.5□□□□□ -0.25
HPS1-204ENST00000361490 A0A087WWV3 80 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 EXOSC10Q01780 885 aaKnown RBP13.49□□□□□ -0.25
HPS1-204ENST00000361490 CCAR1Q8IX12 1150 aaKnown RBP13.49□□□□□ -0.25
HPS1-204ENST00000361490 ZNF654Q8IZM8 581 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 TBC1D16Q8TBP0 767 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 ZNF274Q96GC6 653 aaPredicted RBP13.49□□□□□ -0.25
HPS1-204ENST00000361490 TMEM87BQ96K49 555 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 USP28Q96RU2 1077 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 RPAP1Q9BWH6 1393 aaPredicted RBP13.49□□□□□ -0.25
HPS1-204ENST00000361490 CCDC196A0A1B0GTZ2 297 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 DNTTIP2Q5QJE6 756 aaKnown RBP13.49□□□□□ -0.25
HPS1-204ENST00000361490 FBXO33Q7Z6M2 555 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 SPC24Q8NBT2 197 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 A0A1B0GVL5 298 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 FAM196BA6NMK8 535 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 LIG1P18858 919 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 CDC27P30260 824 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 VPS54Q9P1Q0 977 aa13.49□□□□□ -0.25
HPS1-204ENST00000361490 SCAF8Q9UPN6 1271 aaKnown RBP13.49□□□□□ -0.25
HPS1-204ENST00000361490 USP17L3A6NCW0 530 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 USP17L4A6NCW7 530 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 PPIP5K2O43314 1243 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 USP17L1Q7RTZ2 530 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 NKX2-3Q8TAU0 364 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 CPVLQ9H3G5 476 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 VEZTQ9HBM0 779 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 MARCH6O60337 910 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 NLRP5P59047 1200 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 CCDC183Q5T5S1 534 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 KRT40Q6A162 431 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 LEO1Q8WVC0 666 aaPredicted RBP13.48□□□□□ -0.25
HPS1-204ENST00000361490 RBSNQ9H1K0 784 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 USP40Q9NVE5 1235 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 ARFGEF2Q9Y6D5 1785 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 DOT1LQ8TEK3 1739 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 RAD17O75943 681 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 TSGA10IPQ3SY00 556 aa13.48□□□□□ -0.25
HPS1-204ENST00000361490 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
HPS1-204ENST00000361490 DCP1AQ9NPI6 582 aaPredicted RBP13.48□□□□□ -0.25
HPS1-204ENST00000361490 TCRBV5S4A2TA0A5A2 114 aa13.47□□□□□ -0.25
HPS1-204ENST00000361490 POLRMTO00411 1230 aaKnown RBP13.47□□□□□ -0.25
HPS1-204ENST00000361490 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
HPS1-204ENST00000361490 MSNP26038 577 aaKnown RBP13.47□□□□□ -0.25
HPS1-204ENST00000361490 USP25Q9UHP3 1055 aa13.47□□□□□ -0.25
HPS1-204ENST00000361490 SLF2Q8IX21 1173 aa13.47□□□□□ -0.25
HPS1-204ENST00000361490 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
HPS1-204ENST00000361490 VIRMAQ69YN4 1812 aaKnown RBP13.47□□□□□ -0.25
HPS1-204ENST00000361490 GOLGA6L19H0YKK7 550 aa13.46□□□□□ -0.25
HPS1-204ENST00000361490 FOXP2O15409 715 aa13.46□□□□□ -0.25
HPS1-204ENST00000361490 MAP3K11Q16584 847 aa13.46□□□□□ -0.25
HPS1-204ENST00000361490 CCDC96Q2M329 555 aa13.46□□□□□ -0.25
HPS1-204ENST00000361490 CTR9Q6PD62 1173 aa13.46□□□□□ -0.25
HPS1-204ENST00000361490 LARGE2Q8N3Y3 721 aa13.46□□□□□ -0.25
HPS1-204ENST00000361490 ZSCAN10Q96SZ4 725 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms