RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 SLFNL1Q499Z3 407 aa16.59■□□□□ 0.25
NSMCE1-201ENST00000361439 CASC1Q6TDU7 716 aa16.59■□□□□ 0.25
NSMCE1-201ENST00000361439 TEPSINQ96N21 525 aa16.59■□□□□ 0.25
NSMCE1-201ENST00000361439 MKRN1Q9UHC7 482 aaKnown RBP16.59■□□□□ 0.25
NSMCE1-201ENST00000361439 FLT1P17948 1338 aa16.59■□□□□ 0.25
NSMCE1-201ENST00000361439 A0A0D9SFI3 127 aa16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 PATL2C9JE40 543 aaKnown RBP16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 ADM5C9JUS6 153 aa16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 M0R2C6 588 aa16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 FKBP1BP68106 108 aa16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 PICALMQ13492 652 aa16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 CWC27Q6UX04 472 aaKnown RBP16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 FAM227BQ96M60 508 aa16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 TMEM39BQ9GZU3 492 aa16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 DCP1AQ9NPI6 582 aaPredicted RBP16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 DDX4Q9NQI0 724 aaKnown RBP16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 SLC4A4Q9Y6R1 1079 aa16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 AK9Q5TCS8 1911 aa16.58■□□□□ 0.24
NSMCE1-201ENST00000361439 CCDC171Q6TFL3 1326 aa16.57■□□□□ 0.24
NSMCE1-201ENST00000361439 TCP10Q12799 353 aa16.57■□□□□ 0.24
NSMCE1-201ENST00000361439 CDCA5Q96FF9 252 aa16.57■□□□□ 0.24
NSMCE1-201ENST00000361439 SEC62Q99442 399 aaKnown RBP16.57■□□□□ 0.24
NSMCE1-201ENST00000361439 NACAP1Q9BZK3 213 aa16.57■□□□□ 0.24
NSMCE1-201ENST00000361439 UNCXA6NJT0 531 aa16.56■□□□□ 0.24
NSMCE1-201ENST00000361439 TBC1D12O60347 775 aa16.56■□□□□ 0.24
NSMCE1-201ENST00000361439 CDC45O75419 566 aa16.56■□□□□ 0.24
NSMCE1-201ENST00000361439 MAP3K10Q02779 954 aa16.56■□□□□ 0.24
NSMCE1-201ENST00000361439 TTC6Q86TZ1 520 aa16.56■□□□□ 0.24
NSMCE1-201ENST00000361439 MAPKAPK5Q8IW41 473 aa16.56■□□□□ 0.24
NSMCE1-201ENST00000361439 AMOTL1Q8IY63 956 aa16.56■□□□□ 0.24
NSMCE1-201ENST00000361439 PI4KBQ9UBF8 816 aa16.56■□□□□ 0.24
NSMCE1-201ENST00000361439 POLR2AP24928 1970 aaKnown RBP16.56■□□□□ 0.24
NSMCE1-201ENST00000361439 ZMYM6O95789 1325 aa16.55■□□□□ 0.24
NSMCE1-201ENST00000361439 GSG1L2A8MUP6 293 aa16.55■□□□□ 0.24
NSMCE1-201ENST00000361439 TRAF5O00463 557 aa16.55■□□□□ 0.24
NSMCE1-201ENST00000361439 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
NSMCE1-201ENST00000361439 HLA-DOAP06340 250 aa16.55■□□□□ 0.24
NSMCE1-201ENST00000361439 ALX1Q15699 326 aa16.55■□□□□ 0.24
NSMCE1-201ENST00000361439 DCAF15Q66K64 600 aa16.55■□□□□ 0.24
NSMCE1-201ENST00000361439 METTL16Q86W50 562 aaKnown RBP16.55■□□□□ 0.24
NSMCE1-201ENST00000361439 SDR42E1Q8WUS8 393 aa16.55■□□□□ 0.24
NSMCE1-201ENST00000361439 CSRNP1Q96S65 589 aa16.55■□□□□ 0.24
NSMCE1-201ENST00000361439 ARPP21Q9UBL0 812 aaPredicted RBP16.55■□□□□ 0.24
NSMCE1-201ENST00000361439 FOCADQ5VW36 1801 aa16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 SGSM2O43147 1006 aa16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 MAP3K11Q16584 847 aa16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 SBK1Q52WX2 424 aa16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 NBPF12Q5TAG4 269 aaPredicted RBP16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 SH3BP5LQ7L8J4 393 aa16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 FOXP4Q8IVH2 680 aaPredicted RBP16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 ZSCAN29Q8IWY8 852 aaPredicted RBP16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 ZFPM1Q8IX07 1006 aa16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 EHD4Q9H223 541 aa16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 HERC5Q9UII4 1024 aaKnown RBP16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 SCAF8Q9UPN6 1271 aaKnown RBP16.54■□□□□ 0.24
NSMCE1-201ENST00000361439 DDTLA6NHG4 134 aaPredicted RBP16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 PRKAB2O43741 272 aa16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 EIF5BO60841 1220 aaKnown RBP16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 CELF2O95319 508 aaKnown RBP16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 APPP05067 770 aa16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 HSPD1P10809 573 aaKnown RBP16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 APLP1P51693 650 aa16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 ZNF589Q86UQ0 364 aaPredicted RBP16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 IFNL3Q8IZI9 196 aa16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 C2orf69Q8N8R5 385 aa16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 MCM9Q9NXL9 1143 aa16.53■□□□□ 0.24
NSMCE1-201ENST00000361439 TMEM88BA6NKF7 163 aa16.52■□□□□ 0.24
NSMCE1-201ENST00000361439 POLR3DP05423 398 aaPredicted RBP16.52■□□□□ 0.24
NSMCE1-201ENST00000361439 IREB2P48200 963 aaKnown RBP16.52■□□□□ 0.24
NSMCE1-201ENST00000361439 PRAMEF18Q5VWM3 479 aa16.52■□□□□ 0.24
NSMCE1-201ENST00000361439 CST9Q5W186 159 aa16.52■□□□□ 0.24
NSMCE1-201ENST00000361439 ARMC9Q7Z3E5 817 aa16.52■□□□□ 0.24
NSMCE1-201ENST00000361439 GBA2Q9HCG7 927 aaPredicted RBP16.52■□□□□ 0.24
NSMCE1-201ENST00000361439 PALD1Q9ULE6 856 aa16.52■□□□□ 0.24
NSMCE1-201ENST00000361439 CDK5RAP2Q96SN8 1893 aa16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 TDO2P48775 406 aa16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 C1QTNF8P60827 252 aa16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 C12orf60Q5U649 245 aa16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 CTR9Q6PD62 1173 aa16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 CCDC129Q6ZRS4 1044 aa16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 HHIPL1Q96JK4 782 aa16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 ESYT1Q9BSJ8 1104 aa16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 NAPBQ9H115 298 aa16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 EPB41L4AQ9HCS5 686 aaPredicted RBP16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 CREBZFQ9NS37 354 aa16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 SERPINB13Q9UIV8 391 aa16.51■□□□□ 0.23
NSMCE1-201ENST00000361439 USP17L12C9JPN9 530 aa16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 USP17L21D6R901 530 aa16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 FOXP2O15409 715 aa16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 DLK2Q6UY11 383 aa16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 KIAA1211Q6ZU35 1233 aa16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 CDAN1Q8IWY9 1227 aa16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 ZNF341Q9BYN7 854 aa16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 SWAP70Q9UH65 585 aa16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 SAP30BPQ9UHR5 308 aaKnown RBP16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 CTNNA3Q9UI47 895 aa16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 ZNF112Q9UJU3 913 aa16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 SSC5DA1L4H1 1573 aa16.5■□□□□ 0.23
NSMCE1-201ENST00000361439 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms