RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 VWA3AA6NCI4 1184 aa15.19■□□□□ 0.02
LDB3-202ENST00000361373 SKILP12757 684 aa15.19■□□□□ 0.02
LDB3-202ENST00000361373 ADCY7P51828 1080 aa15.19■□□□□ 0.02
LDB3-202ENST00000361373 SMTNP53814 917 aa15.19■□□□□ 0.02
LDB3-202ENST00000361373 CHD1O14646 1710 aa15.19■□□□□ 0.02
LDB3-202ENST00000361373 SPECC1Q5M775 1068 aa15.19■□□□□ 0.02
LDB3-202ENST00000361373 CHURC1Q8WUH1 139 aa15.19■□□□□ 0.02
LDB3-202ENST00000361373 BBXQ8WY36 941 aaPredicted RBP15.19■□□□□ 0.02
LDB3-202ENST00000361373 CEP83Q9Y592 693 aa15.19■□□□□ 0.02
LDB3-202ENST00000361373 KRT86O43790 486 aa15.19■□□□□ 0.02
LDB3-202ENST00000361373 PRIMPOLQ96LW4 560 aa15.19■□□□□ 0.02
LDB3-202ENST00000361373 CCDC42Q96M95 316 aa15.19■□□□□ 0.02
LDB3-202ENST00000361373 ZNF174Q15697 407 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 CNNM4Q6P4Q7 775 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 PRDM1O75626 825 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 CCDC175P0C221 793 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 CCT6AP40227 531 aaKnown RBP15.18■□□□□ 0.02
LDB3-202ENST00000361373 MYL5Q02045 173 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 KIF5AQ12840 1032 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 HAUS7Q99871 368 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 WWC3Q9ULE0 1092 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 LEMD3Q9Y2U8 911 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 CRKLP46109 303 aaKnown RBP15.18■□□□□ 0.02
LDB3-202ENST00000361373 TTF2Q9UNY4 1162 aaKnown RBP15.18■□□□□ 0.02
LDB3-202ENST00000361373 KIF1BO60333 1816 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 TFAP4Q01664 338 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 CEP135Q66GS9 1140 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 ATG3Q9NT62 314 aa15.18■□□□□ 0.02
LDB3-202ENST00000361373 PRDM15P57071 1507 aaPredicted RBP15.17■□□□□ 0.02
LDB3-202ENST00000361373 GTF2IP78347 998 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 TTC38Q5R3I4 469 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 MAPKAPK5Q8IW41 473 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 SRRTQ9BXP5 876 aaKnown RBP15.17■□□□□ 0.02
LDB3-202ENST00000361373 USP40Q9NVE5 1235 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 FRMD4BQ9Y2L6 1034 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 SHTN1A0MZ66 631 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 PPARAQ07869 468 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 SMC1AQ14683 1233 aaKnown RBP15.17■□□□□ 0.02
LDB3-202ENST00000361373 TGFBRAP1Q8WUH2 860 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 AS3MTQ9HBK9 375 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 MRVI1Q9Y6F6 885 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 ERVV-1B6SEH8 477 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 DCAF15Q66K64 600 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 FCHSD1Q86WN1 690 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 EXOC7Q9UPT5 735 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 TET3O43151 1660 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 PIK3AP1Q6ZUJ8 805 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 CCDC186Q7Z3E2 898 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 C2CD5Q86YS7 1000 aa15.17■□□□□ 0.02
LDB3-202ENST00000361373 FSD2A1L4K1 749 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 GRM1Q13255 1194 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 UBE3CQ15386 1083 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 CNGA4Q8IV77 575 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 ZNF274Q96GC6 653 aaPredicted RBP15.16■□□□□ 0.02
LDB3-202ENST00000361373 CCDC113Q9H0I3 377 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 KCNH3Q9ULD8 1083 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 LUC7L2Q9Y383 392 aaKnown RBP15.16■□□□□ 0.02
LDB3-202ENST00000361373 CDK12Q9NYV4 1490 aaPredicted RBP15.16■□□□□ 0.02
LDB3-202ENST00000361373 PDE8BO95263 885 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 CPA1P15085 419 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 EAF2Q96CJ1 260 aaPredicted RBP15.16■□□□□ 0.02
LDB3-202ENST00000361373 E7EWF7 191 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 IFT74Q96LB3 600 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 PDE6AP16499 860 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 UBXN1Q04323 297 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 VWA3BQ502W6 1294 aa15.16■□□□□ 0.02
LDB3-202ENST00000361373 PRR36Q9H6K5 1346 aa15.15■□□□□ 0.02
LDB3-202ENST00000361373 EPB41P11171 864 aaKnown RBP15.15■□□□□ 0.02
LDB3-202ENST00000361373 MAP2K1Q02750 393 aaPredicted RBP15.15■□□□□ 0.02
LDB3-202ENST00000361373 HS1BP3Q53T59 392 aa15.15■□□□□ 0.02
LDB3-202ENST00000361373 USPL1Q5W0Q7 1092 aa15.15■□□□□ 0.02
LDB3-202ENST00000361373 XDHP47989 1333 aa15.15■□□□□ 0.02
LDB3-202ENST00000361373 RASAL2Q9UJF2 1139 aa15.15■□□□□ 0.02
LDB3-202ENST00000361373 BBOX1O75936 387 aa15.15■□□□□ 0.02
LDB3-202ENST00000361373 TRIM14Q14142 442 aa15.15■□□□□ 0.02
LDB3-202ENST00000361373 ARID4AP29374 1257 aaPredicted RBP15.15■□□□□ 0.02
LDB3-202ENST00000361373 CTDSPL2Q05D32 466 aa15.15■□□□□ 0.02
LDB3-202ENST00000361373 ATP8A2Q9NTI2 1148 aa15.15■□□□□ 0.02
LDB3-202ENST00000361373 ASAP1Q9ULH1 1129 aa15.15■□□□□ 0.02
LDB3-202ENST00000361373 CTAGE15A4D2H0 777 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 CTAGE8P0CG41 777 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 CHRNDQ07001 517 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 KRT40Q6A162 431 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 DPY19L2Q6NUT2 758 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 CTAGE6Q86UF2 777 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 CTAGE4Q8IX94 777 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 MLKLQ8NB16 471 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 ADCY10Q96PN6 1610 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 ARHGEF35A5YM69 484 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 USP17L12C9JPN9 530 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 USP17L21D6R901 530 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 CCNT1O60563 726 aaKnown RBP15.14■□□□□ 0.01
LDB3-202ENST00000361373 SEC24BO95487 1268 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 CCDC24Q8N4L8 307 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 LRWD1Q9UFC0 647 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 ZBTB21Q9ULJ3 1066 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 TRAF5O00463 557 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 TRMT2AQ8IZ69 625 aaKnown RBP15.14■□□□□ 0.01
LDB3-202ENST00000361373 REXO1Q8N1G1 1221 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms