RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 MYO1BO43795 1136 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 STARD3NLO95772 234 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 TUBBP07437 444 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 CATIPQ7Z7H3 387 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 FCHSD1Q86WN1 690 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 TMEM87BQ96K49 555 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 VPS16Q9H269 839 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 EPC1Q9H2F5 836 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 OVOS2A0A0J9YW53 1432 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 OVOS2Q6IE36 1432 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 USP31Q70CQ4 1352 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 GTF2A1P52655 376 aaPredicted RBP13.6□□□□□ -0.23
EPHB4-202ENST00000360620 TRIM47Q96LD4 638 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 SH3TC1Q8TE82 1336 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 LONRF2Q1L5Z9 754 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 LONRF3Q496Y0 759 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 STOX1Q6ZVD7 989 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 CDK5RAP3Q96JB5 506 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 AIFM3Q96NN9 605 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 FAM107BQ9H098 131 aa13.6□□□□□ -0.23
EPHB4-202ENST00000360620 ZCCHC17Q9NP64 241 aaKnown RBP13.6□□□□□ -0.23
EPHB4-202ENST00000360620 GNL3LQ9NVN8 582 aaKnown RBP13.6□□□□□ -0.23
EPHB4-202ENST00000360620 SYNRGQ9UMZ2 1314 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 GOLGA6L10A6NI86 522 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 ATP8B1O43520 1251 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 SLC5A1P13866 664 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 RBM43Q6ZSC3 357 aaKnown RBP13.59□□□□□ -0.23
EPHB4-202ENST00000360620 VSTM4Q8IW00 320 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 PARD6BQ9BYG5 372 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 TTF2Q9UNY4 1162 aaKnown RBP13.59□□□□□ -0.23
EPHB4-202ENST00000360620 CDC42BPGQ6DT37 1551 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 USO1O60763 962 aaKnown RBP13.59□□□□□ -0.23
EPHB4-202ENST00000360620 EPS15P42566 896 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 PAFAH1B1P43034 410 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 MTIF2P46199 727 aaKnown RBP13.59□□□□□ -0.23
EPHB4-202ENST00000360620 CKAP4Q07065 602 aaKnown RBP13.59□□□□□ -0.23
EPHB4-202ENST00000360620 KCNB2Q92953 911 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 DRC1Q96MC2 740 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 PDE11AQ9HCR9 933 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 UBXN1Q04323 297 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 TTC31Q49AM3 519 aaPredicted RBP13.59□□□□□ -0.23
EPHB4-202ENST00000360620 TMTC2Q8N394 836 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 EHBP1Q8NDI1 1231 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 HELBQ8NG08 1087 aaPredicted RBP13.59□□□□□ -0.23
EPHB4-202ENST00000360620 SLC4A4Q9Y6R1 1079 aa13.59□□□□□ -0.23
EPHB4-202ENST00000360620 BTBD18B2RXH4 712 aa13.58□□□□□ -0.23
EPHB4-202ENST00000360620 BMP15O95972 392 aa13.58□□□□□ -0.23
EPHB4-202ENST00000360620 A1BGP04217 495 aa13.58□□□□□ -0.23
EPHB4-202ENST00000360620 UQCRFS1P1P0C7P4 283 aa13.58□□□□□ -0.23
EPHB4-202ENST00000360620 FKBP15Q5T1M5 1219 aa13.58□□□□□ -0.23
EPHB4-202ENST00000360620 OSBP2Q969R2 916 aa13.58□□□□□ -0.23
EPHB4-202ENST00000360620 TCHHQ07283 1943 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 NUTM2BA6NNL0 878 aaPredicted RBP13.58□□□□□ -0.24
EPHB4-202ENST00000360620 NUTM2EB1AL46 878 aaPredicted RBP13.58□□□□□ -0.24
EPHB4-202ENST00000360620 KRT9P35527 623 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 UBA7P41226 1012 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 CDR1P51861 262 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 STAMQ92783 540 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 LUC7LQ9NQ29 371 aaKnown RBP13.58□□□□□ -0.24
EPHB4-202ENST00000360620 TMOD3Q9NYL9 352 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 PTPRUQ92729 1446 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 MED23Q9ULK4 1368 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 NRKQ7Z2Y5 1582 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 CYLC1P35663 651 aaPredicted RBP13.58□□□□□ -0.24
EPHB4-202ENST00000360620 GYS2P54840 703 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 MICALL1Q8N3F8 863 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 SLF1Q9BQI6 1058 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 MAPK8IP1Q9UQF2 711 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 PXDNLA1KZ92 1463 aa13.58□□□□□ -0.24
EPHB4-202ENST00000360620 VWA3AA6NCI4 1184 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 TMEM232C9JQI7 657 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 M0R2C6 588 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 CCDC122Q5T0U0 273 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 LUC7L2Q9Y383 392 aaKnown RBP13.57□□□□□ -0.24
EPHB4-202ENST00000360620 CCDC151A5D8V7 595 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 KRT86O43790 486 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 NOSTRINQ8IVI9 506 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 CTNND2Q9UQB3 1225 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 AXIN2Q9Y2T1 843 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 PLEKHG1Q9ULL1 1385 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 KIF20BQ96Q89 1820 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 MBD4O95243 580 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 IGHMBP2P38935 993 aaKnown RBP13.57□□□□□ -0.24
EPHB4-202ENST00000360620 TUBB2AQ13885 445 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 USPL1Q5W0Q7 1092 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 MAGEB6Q8N7X4 407 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 GDAP1L1Q96MZ0 367 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 TUBB2BQ9BVA1 445 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 PUS3Q9BZE2 481 aaKnown RBP13.57□□□□□ -0.24
EPHB4-202ENST00000360620 C19orf44Q9H6X5 657 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 RMND1Q9NWS8 449 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 ZMYM6O95789 1325 aa13.57□□□□□ -0.24
EPHB4-202ENST00000360620 SRGAP1Q7Z6B7 1085 aa13.56□□□□□ -0.24
EPHB4-202ENST00000360620 TMTC1Q8IUR5 882 aa13.56□□□□□ -0.24
EPHB4-202ENST00000360620 IQUBQ8NA54 791 aa13.56□□□□□ -0.24
EPHB4-202ENST00000360620 ESR2Q92731 530 aa13.56□□□□□ -0.24
EPHB4-202ENST00000360620 IL17RAQ96F46 866 aa13.56□□□□□ -0.24
EPHB4-202ENST00000360620 IQSEC3Q9UPP2 1182 aaPredicted RBP13.56□□□□□ -0.24
EPHB4-202ENST00000360620 CCDC194A0A1B0GVG4 234 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms