RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SPDL1Q96EA4 605 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 STK24Q9Y6E0 443 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 TXNDC2Q86VQ3 553 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 RIOK3O14730 519 aaKnown RBP10.33□□□□□ -0.76
VPS13A-203ENST00000360280 OAS2P29728 719 aaKnown RBP10.33□□□□□ -0.76
VPS13A-203ENST00000360280 PEX19P40855 299 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 PPP1R42Q7Z4L9 355 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 NAP1L4Q99733 375 aaKnown RBP10.33□□□□□ -0.76
VPS13A-203ENST00000360280 ATAD2BQ9ULI0 1458 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 FLOT1O75955 427 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 IRX5P78411 483 aaPredicted RBP10.33□□□□□ -0.76
VPS13A-203ENST00000360280 BRF1Q92994 677 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 ZSCAN26Q16670 478 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 SLC9C1Q4G0N8 1177 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 MCMDC2Q4G0Z9 681 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 TEX13AQ9BXU3 409 aaPredicted RBP10.33□□□□□ -0.76
VPS13A-203ENST00000360280 C11orf95C9JLR9 678 aaPredicted RBP10.32□□□□□ -0.76
VPS13A-203ENST00000360280 LRRC43Q8N309 656 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 RIPOR2Q9Y4F9 1068 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 APOEP02649 317 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 U2AF2P26368 475 aaKnown RBP eCLIP10.32□□□□□ -0.761e-6■■■□□ 18.1
VPS13A-203ENST00000360280 INTS4Q96HW7 963 aaKnown RBP10.32□□□□□ -0.76
VPS13A-203ENST00000360280 CTNND2Q9UQB3 1225 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 SNCBQ16143 134 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 LDHAL6AQ6ZMR3 332 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 RNF34Q969K3 372 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 SLC52A1Q9NWF4 448 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 TMOD4Q9NZQ9 345 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 CTTNBP2NLQ9P2B4 639 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 PTCD1O75127 700 aaKnown RBP10.32□□□□□ -0.76
VPS13A-203ENST00000360280 Q6ZUG5 572 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 IGSF22Q8N9C0 903 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 HELBQ8NG08 1087 aaPredicted RBP10.32□□□□□ -0.76
VPS13A-203ENST00000360280 FNBP1Q96RU3 617 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 NUCKS1Q9H1E3 243 aaKnown RBP10.32□□□□□ -0.76
VPS13A-203ENST00000360280 KRT71Q3SY84 523 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 FAM71BQ8TC56 605 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 BCRP11274 1271 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 ANKRD20A4Q4UJ75 823 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 ANKRD20A8PQ5CZ79 823 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 ANKRD20A2Q5SQ80 823 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 ANKRD20A1Q5TYW2 823 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 TYW1Q9NV66 732 aaKnown RBP10.32□□□□□ -0.76
VPS13A-203ENST00000360280 CAPN7Q9Y6W3 813 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 SERPINB6P35237 376 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 ESRRGP62508 458 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 GRK7Q8WTQ7 553 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 MRRFQ96E11 262 aaKnown RBP10.32□□□□□ -0.76
VPS13A-203ENST00000360280 PPME1Q9Y570 386 aa10.32□□□□□ -0.76
VPS13A-203ENST00000360280 ASIC2Q16515 512 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 SV2BQ7L1I2 683 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 POGZQ7Z3K3 1410 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 RGS16O15492 202 aaPredicted RBP10.31□□□□□ -0.76
VPS13A-203ENST00000360280 KRT9P35527 623 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 UBE3BQ7Z3V4 1068 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 SETD1BQ9UPS6 1966 aaKnown RBP10.31□□□□□ -0.76
VPS13A-203ENST00000360280 CTNNA1P35221 906 aaKnown RBP10.31□□□□□ -0.76
VPS13A-203ENST00000360280 PLCD1P51178 756 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 ARHGAP6O43182 974 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 CASC4Q6P4E1 433 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 ZRANB1Q9UGI0 708 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 GOLGA8KD6RF30 607 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 LMNB2Q03252 620 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 MAP3K2Q9Y2U5 619 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 HDAC1Q13547 482 aaPredicted RBP10.31□□□□□ -0.76
VPS13A-203ENST00000360280 CCDC152Q4G0S7 254 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 CDAN1Q8IWY9 1227 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 CCDC105Q8IYK2 499 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 ASXL1Q8IXJ9 1541 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 PAXIP1Q6ZW49 1069 aaPredicted RBP10.31□□□□□ -0.76
VPS13A-203ENST00000360280 TMTC1Q8IUR5 882 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 HGSO14964 777 aaPredicted RBP10.31□□□□□ -0.76
VPS13A-203ENST00000360280 ST5P78524 1137 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 RASIP1Q5U651 963 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 NLRP7Q8WX94 980 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 RUSC2Q8N2Y8 1516 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 TTC41PQ6P2S7 1318 aa10.31□□□□□ -0.76
VPS13A-203ENST00000360280 BIRC3Q13489 604 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 ELF2Q15723 593 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 PROCA1Q8NCQ7 364 aaPredicted RBP10.3□□□□□ -0.76
VPS13A-203ENST00000360280 KRT12Q99456 494 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 TACO1Q9BSH4 297 aaKnown RBP10.3□□□□□ -0.76
VPS13A-203ENST00000360280 ZNF710Q8N1W2 664 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 NAIPQ13075 1403 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 RAB3GAP1Q15042 981 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 TRIM6Q9C030 488 aaPredicted RBP10.3□□□□□ -0.76
VPS13A-203ENST00000360280 MED4Q9NPJ6 270 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 MIS18AQ9NYP9 233 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 PLCG2P16885 1265 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 KLHDC4Q8TBB5 520 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 EFCC1Q9HA90 598 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 SESN3P58005 492 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 HAUS1Q96CS2 278 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 F6X3S4 739 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 MAN1A2O60476 641 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 RAP1GDS1P52306 607 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 HAUS3Q68CZ6 603 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 IL16Q14005 1332 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 TTC4O95801 387 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 BRD3Q15059 726 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms