RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SIRT1Q96EB6 747 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 DCAF5Q96JK2 942 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 HAUS8Q9BT25 410 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 GRIN2AQ12879 1464 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 EIF4G3O43432 1585 aaKnown RBP10.79□□□□□ -0.68
CUX1-203ENST00000360264 GIMAP6Q6P9H5 292 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 LRRC59Q96AG4 307 aaKnown RBP10.79□□□□□ -0.68
CUX1-203ENST00000360264 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
CUX1-203ENST00000360264 MCM7P33993 719 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 TSNAXIP1Q2TAA8 658 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 FCHSD1Q86WN1 690 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 H0YCG3 227 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 ANKRD12Q6UB98 2062 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 PICALMQ13492 652 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 CYP26C1Q6V0L0 522 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 HELLSQ9NRZ9 838 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 PTGS1P23219 599 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 GOLGA5Q8TBA6 731 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 VCX3AQ9NNX9 186 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 IPO4Q8TEX9 1081 aaKnown RBP10.79□□□□□ -0.68
CUX1-203ENST00000360264 HAUS1Q96CS2 278 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 GDPD2Q9HCC8 539 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 GRM1Q13255 1194 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 DCUN1D2Q6PH85 259 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 PPP4R1Q8TF05 950 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 TTC36A6NLP5 189 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 RAPGEF1Q13905 1077 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 MIPOL1Q8TD10 442 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 SLC12A2P55011 1212 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 FAM160A1Q05DH4 1040 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 MICAL3Q7RTP6 2002 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 MAP3K5Q99683 1374 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 RNF113AO15541 343 aaKnown RBP10.78□□□□□ -0.68
CUX1-203ENST00000360264 UFL1O94874 794 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 SATB1Q01826 763 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 UBAP1LF5GYI3 381 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 PLCB4Q15147 1175 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 TEKT1Q969V4 418 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 IWS1Q96ST2 819 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 RIOK1Q9BRS2 568 aaKnown RBP10.78□□□□□ -0.68
CUX1-203ENST00000360264 PLCB1Q9NQ66 1216 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 GNA14O95837 355 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 CCDC89Q8N998 374 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 BABAM1Q9NWV8 329 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 CCDC122Q5T0U0 273 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 POTEDQ86YR6 584 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 LRRC2Q9BYS8 371 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 PODXL2Q9NZ53 605 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 NEDD9Q14511 834 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 IGSF22Q8N9C0 903 aa10.78□□□□□ -0.68
CUX1-203ENST00000360264 NR1I2O75469 434 aa10.77□□□□□ -0.68
CUX1-203ENST00000360264 CAPN2P17655 700 aa10.77□□□□□ -0.68
CUX1-203ENST00000360264 PDE1AP54750 535 aa10.77□□□□□ -0.68
CUX1-203ENST00000360264 TNFAIP1Q13829 316 aa10.77□□□□□ -0.68
CUX1-203ENST00000360264 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.77□□□□□ -0.68
CUX1-203ENST00000360264 PPANQ9NQ55 473 aaKnown RBP10.77□□□□□ -0.68
CUX1-203ENST00000360264 NUP160Q12769 1436 aa10.77□□□□□ -0.68
CUX1-203ENST00000360264 FAM83GA6ND36 823 aa10.77□□□□□ -0.68
CUX1-203ENST00000360264 F13A1P00488 732 aa10.77□□□□□ -0.68
CUX1-203ENST00000360264 CCT6AP40227 531 aaKnown RBP10.77□□□□□ -0.69
CUX1-203ENST00000360264 PPP2R3AQ06190 1150 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 ACEP12821 1306 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 IBTKQ9P2D0 1353 aaPredicted RBP10.77□□□□□ -0.69
CUX1-203ENST00000360264 ARHGEF35A5YM69 484 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 ATF7P17544 494 aaPredicted RBP10.77□□□□□ -0.69
CUX1-203ENST00000360264 UTP14CQ5TAP6 766 aaKnown RBP10.77□□□□□ -0.69
CUX1-203ENST00000360264 MCTP2Q6DN12 878 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 RUFY3Q7L099 469 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.77□□□□□ -0.69
CUX1-203ENST00000360264 CNPY2Q9Y2B0 182 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 PALM3A6NDB9 673 aaPredicted RBP10.77□□□□□ -0.69
CUX1-203ENST00000360264 SDCCAG8Q86SQ7 713 aaPredicted RBP10.77□□□□□ -0.69
CUX1-203ENST00000360264 MCUR1Q96AQ8 359 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 WDR70Q9NW82 654 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 KDM3AQ9Y4C1 1321 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 TCIRG1Q13488 830 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 C8orf37Q96NL8 207 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 NESP48681 1621 aa10.77□□□□□ -0.69
CUX1-203ENST00000360264 CARD10Q9BWT7 1032 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 FLT4P35916 1363 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 CCNT1O60563 726 aaKnown RBP10.76□□□□□ -0.69
CUX1-203ENST00000360264 ZBED4O75132 1171 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 LMBR1LQ6UX01 489 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.76□□□□□ -0.69
CUX1-203ENST00000360264 NBPF11Q86T75 865 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 RTEL1Q9NZ71 1219 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 LARP6Q9BRS8 491 aaKnown RBP10.76□□□□□ -0.69
CUX1-203ENST00000360264 TRPC6Q9Y210 931 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 CUTAO60888 179 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 N4BP1O75113 896 aaKnown RBP10.76□□□□□ -0.69
CUX1-203ENST00000360264 PHLDB2Q86SQ0 1253 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 MAIP1Q8WWC4 291 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 NT5C3AQ9H0P0 336 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 ZRANB1Q9UGI0 708 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 ANGEL1Q9UNK9 670 aaKnown RBP10.76□□□□□ -0.69
CUX1-203ENST00000360264 DUOX2Q9NRD8 1548 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 SMIM23A6NLE4 172 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 ASIC2Q16515 512 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 DACT1Q9NYF0 836 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 PARP2Q9UGN5 583 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms