RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 RESP18Q5W5W9 173 aa8.58□□□□□ -1.04
APP-206ENST00000359726 TRAPPC11Q7Z392 1133 aa8.58□□□□□ -1.04
APP-206ENST00000359726 AACSQ86V21 672 aa8.58□□□□□ -1.04
APP-206ENST00000359726 SPATA20Q8TB22 786 aa8.58□□□□□ -1.04
APP-206ENST00000359726 COG1Q8WTW3 980 aa8.58□□□□□ -1.04
APP-206ENST00000359726 TBC1D22AQ8WUA7 517 aa8.58□□□□□ -1.04
APP-206ENST00000359726 EYA1Q99502 592 aa8.58□□□□□ -1.04
APP-206ENST00000359726 SIL1Q9H173 461 aa8.58□□□□□ -1.04
APP-206ENST00000359726 EHD4Q9H223 541 aa8.58□□□□□ -1.04
APP-206ENST00000359726 HPS5Q9UPZ3 1129 aa8.58□□□□□ -1.04
APP-206ENST00000359726 LRP6O75581 1613 aa8.58□□□□□ -1.04
APP-206ENST00000359726 CHD4Q14839 1912 aa8.58□□□□□ -1.04
APP-206ENST00000359726 SPTLC2O15270 562 aa8.58□□□□□ -1.04
APP-206ENST00000359726 ERLIN1O75477 346 aa8.58□□□□□ -1.04
APP-206ENST00000359726 RASSF9O75901 435 aa8.58□□□□□ -1.04
APP-206ENST00000359726 HOXB7P09629 217 aa8.58□□□□□ -1.04
APP-206ENST00000359726 USP14P54578 494 aa8.58□□□□□ -1.04
APP-206ENST00000359726 TLDC1Q6P9B6 456 aa8.58□□□□□ -1.04
APP-206ENST00000359726 DHX32Q7L7V1 743 aaKnown RBP8.58□□□□□ -1.04
APP-206ENST00000359726 CTCFLQ8NI51 663 aaPredicted RBP8.58□□□□□ -1.04
APP-206ENST00000359726 DNAAF4Q8WXU2 420 aa8.58□□□□□ -1.04
APP-206ENST00000359726 SDF4Q9BRK5 362 aa8.58□□□□□ -1.04
APP-206ENST00000359726 GLI3P10071 1580 aa8.58□□□□□ -1.04
APP-206ENST00000359726 TARSL2A2RTX5 802 aaKnown RBP8.58□□□□□ -1.04
APP-206ENST00000359726 EIF3HO15372 352 aaKnown RBP eCLIP8.58□□□□□ -1.04
APP-206ENST00000359726 MYBL2P10244 700 aa8.58□□□□□ -1.04
APP-206ENST00000359726 MRPL12P52815 198 aaKnown RBP8.58□□□□□ -1.04
APP-206ENST00000359726 SKOR1P84550 965 aa8.58□□□□□ -1.04
APP-206ENST00000359726 PNOCQ13519 176 aa8.58□□□□□ -1.04
APP-206ENST00000359726 SLC39A14Q15043 492 aa8.58□□□□□ -1.04
APP-206ENST00000359726 NECTIN2Q92692 538 aa8.58□□□□□ -1.04
APP-206ENST00000359726 NCOA5Q9HCD5 579 aaKnown RBP8.58□□□□□ -1.04
APP-206ENST00000359726 FOXP2O15409 715 aa8.57□□□□□ -1.04
APP-206ENST00000359726 SCP2P22307 547 aa8.57□□□□□ -1.04
APP-206ENST00000359726 LIG3P49916 1009 aa8.57□□□□□ -1.04
APP-206ENST00000359726 EIF4A1P60842 406 aaKnown RBP8.57□□□□□ -1.04
APP-206ENST00000359726 TAF7Q15545 349 aaPredicted RBP8.57□□□□□ -1.04
APP-206ENST00000359726 CFAP100Q494V2 611 aa8.57□□□□□ -1.04
APP-206ENST00000359726 YTHDF3Q7Z739 585 aaKnown RBP8.57□□□□□ -1.04
APP-206ENST00000359726 RIN2Q8WYP3 895 aaPredicted RBP8.57□□□□□ -1.04
APP-206ENST00000359726 NAA15Q9BXJ9 866 aaKnown RBP8.57□□□□□ -1.04
APP-206ENST00000359726 LRRC2Q9BYS8 371 aa8.57□□□□□ -1.04
APP-206ENST00000359726 ZSWIM4Q9H7M6 989 aa8.57□□□□□ -1.04
APP-206ENST00000359726 GNL3LQ9NVN8 582 aaKnown RBP8.57□□□□□ -1.04
APP-206ENST00000359726 BCCIPQ9P287 314 aaKnown RBP eCLIP8.57□□□□□ -1.04
APP-206ENST00000359726 ALS2Q96Q42 1657 aa8.57□□□□□ -1.04
APP-206ENST00000359726 PLEKHG3A1L390 1219 aa8.57□□□□□ -1.04
APP-206ENST00000359726 ZEB2O60315 1214 aa8.57□□□□□ -1.04
APP-206ENST00000359726 PPP6R2O75170 966 aa8.57□□□□□ -1.04
APP-206ENST00000359726 CCDC175P0C221 793 aa8.57□□□□□ -1.04
APP-206ENST00000359726 EPB41P11171 864 aaKnown RBP8.57□□□□□ -1.04
APP-206ENST00000359726 GGCXP38435 758 aa8.57□□□□□ -1.04
APP-206ENST00000359726 FAM228AQ86W67 206 aa8.57□□□□□ -1.04
APP-206ENST00000359726 AENQ8WTP8 325 aaKnown RBP8.57□□□□□ -1.04
APP-206ENST00000359726 EDC3Q96F86 508 aaKnown RBP8.57□□□□□ -1.04
APP-206ENST00000359726 SEC31BQ9NQW1 1179 aa8.57□□□□□ -1.04
APP-206ENST00000359726 U3KPZ7 1027 aaPredicted RBP8.57□□□□□ -1.04
APP-206ENST00000359726 NUP188Q5SRE5 1749 aa8.57□□□□□ -1.04
APP-206ENST00000359726 MYH2Q9UKX2 1941 aa8.57□□□□□ -1.04
APP-206ENST00000359726 ANKRD33BA6NCL7 494 aa8.56□□□□□ -1.04
APP-206ENST00000359726 GNAT3A8MTJ3 354 aa8.56□□□□□ -1.04
APP-206ENST00000359726 SH2B2O14492 632 aaPredicted RBP8.56□□□□□ -1.04
APP-206ENST00000359726 PHACTR2O75167 634 aa8.56□□□□□ -1.04
APP-206ENST00000359726 ATP5JP18859 108 aa8.56□□□□□ -1.04
APP-206ENST00000359726 KIF23Q02241 960 aaPredicted RBP8.56□□□□□ -1.04
APP-206ENST00000359726 SLC35F6Q8N357 371 aa8.56□□□□□ -1.04
APP-206ENST00000359726 ENOX1Q8TC92 643 aaKnown RBP8.56□□□□□ -1.04
APP-206ENST00000359726 GPATCH3Q96I76 525 aa8.56□□□□□ -1.04
APP-206ENST00000359726 FMNL2Q96PY5 1086 aa8.56□□□□□ -1.04
APP-206ENST00000359726 REXO2Q9Y3B8 237 aaKnown RBP8.56□□□□□ -1.04
APP-206ENST00000359726 UBR1Q8IWV7 1749 aa8.56□□□□□ -1.04
APP-206ENST00000359726 PXDNQ92626 1479 aa8.56□□□□□ -1.04
APP-206ENST00000359726 PI4KAP2A4QPH2 592 aa8.56□□□□□ -1.04
APP-206ENST00000359726 SERPINC1P01008 464 aa8.56□□□□□ -1.04
APP-206ENST00000359726 CCT5P48643 541 aa8.56□□□□□ -1.04
APP-206ENST00000359726 MORC3Q14149 939 aa8.56□□□□□ -1.04
APP-206ENST00000359726 ANO1Q5XXA6 986 aa8.56□□□□□ -1.04
APP-206ENST00000359726 CCDC129Q6ZRS4 1044 aa8.56□□□□□ -1.04
APP-206ENST00000359726 BRAPQ7Z569 592 aa8.56□□□□□ -1.04
APP-206ENST00000359726 PI4KAP1Q8N8J0 262 aa8.56□□□□□ -1.04
APP-206ENST00000359726 SGSM3Q96HU1 749 aa8.56□□□□□ -1.04
APP-206ENST00000359726 GBP3Q9H0R5 595 aa8.56□□□□□ -1.04
APP-206ENST00000359726 PPP1R12AO14974 1030 aaPredicted RBP8.56□□□□□ -1.04
APP-206ENST00000359726 HMGB1P09429 215 aaKnown RBP8.56□□□□□ -1.04
APP-206ENST00000359726 RHOXF2BP0C7M4 288 aa8.56□□□□□ -1.04
APP-206ENST00000359726 ERVK-24P63145 666 aa8.56□□□□□ -1.04
APP-206ENST00000359726 SF3B2Q13435 895 aaKnown RBP8.56□□□□□ -1.04
APP-206ENST00000359726 CDKAL1Q5VV42 579 aa8.56□□□□□ -1.04
APP-206ENST00000359726 ZNF572Q7Z3I7 529 aaPredicted RBP8.56□□□□□ -1.04
APP-206ENST00000359726 RHOXF2Q9BQY4 288 aa8.56□□□□□ -1.04
APP-206ENST00000359726 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.56□□□□□ -1.04
APP-206ENST00000359726 RAI14Q9P0K7 980 aa8.56□□□□□ -1.04
APP-206ENST00000359726 CHPF2Q9P2E5 772 aa8.56□□□□□ -1.04
APP-206ENST00000359726 MYO1AQ9UBC5 1043 aa8.56□□□□□ -1.04
APP-206ENST00000359726 FOXN1O15353 648 aa8.55□□□□□ -1.04
APP-206ENST00000359726 APPP05067 770 aa8.55□□□□□ -1.04
APP-206ENST00000359726 LONRF3Q496Y0 759 aa8.55□□□□□ -1.04
APP-206ENST00000359726 HDGFL1Q5TGJ6 251 aa8.55□□□□□ -1.04
APP-206ENST00000359726 C6orf89Q6UWU4 347 aa8.55□□□□□ -1.04
APP-206ENST00000359726 UBE3BQ7Z3V4 1068 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms