RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 DACT1Q9NYF0 836 aa17.38■□□□□ 0.37
GABPB1-202ENST00000359031 DLEC1Q9Y238 1755 aa17.38■□□□□ 0.37
GABPB1-202ENST00000359031 STK36Q9NRP7 1315 aa17.37■□□□□ 0.37
GABPB1-202ENST00000359031 KDM4AO75164 1064 aa17.37■□□□□ 0.37
GABPB1-202ENST00000359031 GUCY1B3Q02153 619 aa17.37■□□□□ 0.37
GABPB1-202ENST00000359031 SART3Q15020 963 aaKnown RBP17.37■□□□□ 0.37
GABPB1-202ENST00000359031 NFXL1Q6ZNB6 911 aa17.37■□□□□ 0.37
GABPB1-202ENST00000359031 AMIGO3Q86WK7 504 aa17.37■□□□□ 0.37
GABPB1-202ENST00000359031 NKX2-3Q8TAU0 364 aa17.37■□□□□ 0.37
GABPB1-202ENST00000359031 AKT1S1Q96B36 256 aa17.37■□□□□ 0.37
GABPB1-202ENST00000359031 USP28Q96RU2 1077 aa17.37■□□□□ 0.37
GABPB1-202ENST00000359031 RIOK1Q9BRS2 568 aaKnown RBP17.37■□□□□ 0.37
GABPB1-202ENST00000359031 TNMDQ9H2S6 317 aa17.37■□□□□ 0.37
GABPB1-202ENST00000359031 ANAPC4Q9UJX5 808 aa17.37■□□□□ 0.37
GABPB1-202ENST00000359031 GOLGA8AA7E2F4 631 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 IFIT3O14879 490 aaKnown RBP17.36■□□□□ 0.37
GABPB1-202ENST00000359031 IGSF3O75054 1194 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 RCAN1P53805 252 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 ADGRA1Q86SQ6 560 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 CCDC69A6NI79 296 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 TM4SF1P30408 202 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 PPARAQ07869 468 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 ZSCAN30Q86W11 494 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 MICU3Q86XE3 530 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 RAB11FIP4Q86YS3 637 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 BRIP1Q9BX63 1249 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 RTEL1Q9NZ71 1219 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 ZSWIM5Q9P217 1185 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 SLC12A7Q9Y666 1083 aa17.36■□□□□ 0.37
GABPB1-202ENST00000359031 NPHP1O15259 732 aa17.35■□□□□ 0.37
GABPB1-202ENST00000359031 HIBADHP31937 336 aaKnown RBP17.35■□□□□ 0.37
GABPB1-202ENST00000359031 SYNE3Q6ZMZ3 975 aa17.35■□□□□ 0.37
GABPB1-202ENST00000359031 NLGN2Q8NFZ4 835 aa17.35■□□□□ 0.37
GABPB1-202ENST00000359031 CCDC39Q9UFE4 941 aa17.35■□□□□ 0.37
GABPB1-202ENST00000359031 TACC3Q9Y6A5 838 aa17.35■□□□□ 0.37
GABPB1-202ENST00000359031 BAZ2AQ9UIF9 1905 aaKnown RBP17.35■□□□□ 0.37
GABPB1-202ENST00000359031 IRS2Q9Y4H2 1338 aa17.34■□□□□ 0.37
GABPB1-202ENST00000359031 ERICH2A1L162 156 aa17.34■□□□□ 0.37
GABPB1-202ENST00000359031 PPFIA3O75145 1194 aa17.34■□□□□ 0.37
GABPB1-202ENST00000359031 YEATS4O95619 227 aa17.34■□□□□ 0.37
GABPB1-202ENST00000359031 PCP11498 1178 aaKnown RBP17.34■□□□□ 0.37
GABPB1-202ENST00000359031 GRAPQ13588 217 aa17.34■□□□□ 0.37
GABPB1-202ENST00000359031 NFIXQ14938 502 aa17.34■□□□□ 0.37
GABPB1-202ENST00000359031 TMTC2Q8N394 836 aa17.34■□□□□ 0.37
GABPB1-202ENST00000359031 CNBD1Q8NA66 436 aa17.34■□□□□ 0.37
GABPB1-202ENST00000359031 GRAPLQ8TC17 118 aaPredicted RBP17.34■□□□□ 0.37
GABPB1-202ENST00000359031 ALG1Q9BT22 464 aa17.34■□□□□ 0.37
GABPB1-202ENST00000359031 SENP2Q9HC62 589 aa17.34■□□□□ 0.37
GABPB1-202ENST00000359031 POLR3EQ9NVU0 708 aa17.34■□□□□ 0.37
GABPB1-202ENST00000359031 WTIPA6NIX2 430 aaPredicted RBP17.33■□□□□ 0.37
GABPB1-202ENST00000359031 NR1I2O75469 434 aa17.33■□□□□ 0.37
GABPB1-202ENST00000359031 KLRK1P26718 216 aa17.33■□□□□ 0.37
GABPB1-202ENST00000359031 CDC27P30260 824 aa17.33■□□□□ 0.37
GABPB1-202ENST00000359031 KIF23Q02241 960 aaPredicted RBP17.33■□□□□ 0.37
GABPB1-202ENST00000359031 TYRO3Q06418 890 aa17.33■□□□□ 0.37
GABPB1-202ENST00000359031 WTAPQ15007 396 aa17.33■□□□□ 0.37
GABPB1-202ENST00000359031 CTAGE5O15320 804 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 IARSP41252 1262 aaKnown RBP17.32■□□□□ 0.36
GABPB1-202ENST00000359031 CEBPZQ03701 1054 aaKnown RBP17.32■□□□□ 0.36
GABPB1-202ENST00000359031 NTRK3Q16288 839 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 RRP12Q5JTH9 1297 aaKnown RBP17.32■□□□□ 0.36
GABPB1-202ENST00000359031 MYSM1Q5VVJ2 828 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 CCDC73Q6ZRK6 1079 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 KCNG4Q8TDN1 519 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 SDR42E1Q8WUS8 393 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 WASF1Q92558 559 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 NSUN4Q96CB9 384 aaKnown RBP17.32■□□□□ 0.36
GABPB1-202ENST00000359031 FTOQ9C0B1 505 aaKnown RBP eCLIP17.32■□□□□ 0.36
GABPB1-202ENST00000359031 INCENPQ9NQS7 918 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 QSER1Q2KHR3 1735 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 GRIN3BO60391 1043 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 OTUD7BQ6GQQ9 843 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 CCAR1Q8IX12 1150 aaKnown RBP17.32■□□□□ 0.36
GABPB1-202ENST00000359031 FAM200AQ8TCP9 573 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 ESR2Q92731 530 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 TOMM22Q9NS69 142 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 FAM217BQ9NTX9 383 aaPredicted RBP17.32■□□□□ 0.36
GABPB1-202ENST00000359031 LEMD3Q9Y2U8 911 aa17.32■□□□□ 0.36
GABPB1-202ENST00000359031 A0A1W2PQ27 194 aa17.31■□□□□ 0.36
GABPB1-202ENST00000359031 A0A1W2PQ64 194 aa17.31■□□□□ 0.36
GABPB1-202ENST00000359031 A0A1W2PQD8 194 aa17.31■□□□□ 0.36
GABPB1-202ENST00000359031 FMNL1O95466 1100 aaPredicted RBP17.31■□□□□ 0.36
GABPB1-202ENST00000359031 IFNAR1P17181 557 aa17.31■□□□□ 0.36
GABPB1-202ENST00000359031 RXRAP19793 462 aa17.31■□□□□ 0.36
GABPB1-202ENST00000359031 CAMK4Q16566 473 aa17.31■□□□□ 0.36
GABPB1-202ENST00000359031 RTN1Q16799 776 aa17.31■□□□□ 0.36
GABPB1-202ENST00000359031 SPTY2D1Q68D10 685 aaPredicted RBP17.31■□□□□ 0.36
GABPB1-202ENST00000359031 CCDC24Q8N4L8 307 aa17.31■□□□□ 0.36
GABPB1-202ENST00000359031 ZNF384Q8TF68 577 aa17.31■□□□□ 0.36
GABPB1-202ENST00000359031 UBAC1Q9BSL1 405 aa17.31■□□□□ 0.36
GABPB1-202ENST00000359031 MRVI1Q9Y6F6 885 aa17.31■□□□□ 0.36
GABPB1-202ENST00000359031 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.3■□□□□ 0.36
GABPB1-202ENST00000359031 CCDC196A0A1B0GTZ2 297 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 MINDY4BA8MYZ0 360 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 RANBP6O60518 1105 aaKnown RBP17.3■□□□□ 0.36
GABPB1-202ENST00000359031 CAVIN2O95810 425 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 MSNP26038 577 aaKnown RBP17.3■□□□□ 0.36
GABPB1-202ENST00000359031 ME1P48163 572 aa17.3■□□□□ 0.36
GABPB1-202ENST00000359031 DYNLL1P63167 89 aaKnown RBP17.3■□□□□ 0.36
GABPB1-202ENST00000359031 MECOMQ03112 1051 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms