RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 CYP4F22Q6NT55 531 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 DHX32Q7L7V1 743 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 PODNQ7Z5L7 613 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 CNNM2Q9H8M5 875 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 PIH1D3Q9NQM4 214 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 ABCF2Q9UG63 623 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 ATP6V1DQ9Y5K8 247 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 USP17L3A6NCW0 530 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 USP17L4A6NCW7 530 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 G3V3G9 751 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 LDHCP07864 332 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 DDIT3P35638 169 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 GYG1P46976 350 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 NAA16Q6N069 864 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 PI16Q6UXB8 463 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 CCDC129Q6ZRS4 1044 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 CDC37L1Q7L3B6 337 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 USP17L1Q7RTZ2 530 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 SAPCD2Q86UD0 394 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 NCOA7Q8NI08 942 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 TBC1D22AQ8WUA7 517 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 ZIC5Q96T25 663 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 NAPBQ9H115 298 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 RNF41Q9H4P4 317 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 ZNF408Q9H9D4 720 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 WBP1LQ9NX94 342 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 SMC3Q9UQE7 1217 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 TLL2Q9Y6L7 1015 aa12.7□□□□□ -0.38
TRAPPC4-201ENST00000359005 WDR33Q9C0J8 1336 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 SALL1Q9NSC2 1324 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 MYH13Q9UKX3 1938 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 MAGEB6P1A0A0J9YX57 407 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 DHX16O60231 1041 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 AOC2O75106 756 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 CYP21A2P08686 494 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 MCM5P33992 734 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 NBR1Q14596 966 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 RAB3GAP1Q15042 981 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 SKOR2Q2VWA4 1001 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 KRT26Q7Z3Y9 468 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 AMOTL1Q8IY63 956 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 PUS7LQ9H0K6 701 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 SCN9AQ15858 1988 aa12.69□□□□□ -0.38
TRAPPC4-201ENST00000359005 TCRBV5S4A2TA0A5A2 114 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 E7EWF7 191 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 BAG3O95817 575 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 FGAP02671 866 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 USP17L8P0C7I0 530 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 PCP11498 1178 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 CYP7A1P22680 504 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 GRM1Q13255 1194 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 NBPF9Q3BBW0 867 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 FBXL16Q8N461 479 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 CERS5Q8N5B7 392 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 CAPNS2Q96L46 248 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 STRBPQ96SI9 672 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 KRT23Q9C075 422 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 COA1Q9GZY4 146 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 CD209Q9NNX6 404 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 GGA3Q9NZ52 723 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 PCDHAC2Q9Y5I4 1007 aa12.68□□□□□ -0.38
TRAPPC4-201ENST00000359005 MBD4O95243 580 aa12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 LDHBP07195 334 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 TDO2P48775 406 aa12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 GTF2IP78347 998 aa12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 SART3Q15020 963 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 ADCK5Q3MIX3 580 aa12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 STRIP1Q5VSL9 837 aa12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 ANGEL2Q5VTE6 544 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 PRAMEF18Q5VWM3 479 aa12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 DZIP1Q86YF9 867 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 CRNKL1Q9BZJ0 848 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 MYOZ2Q9NPC6 264 aa12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 FOXD4L1Q9NU39 408 aa12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 JAG2Q9Y219 1238 aa12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 SLC4A4Q9Y6R1 1079 aa12.67□□□□□ -0.38
TRAPPC4-201ENST00000359005 MAST2Q6P0Q8 1798 aa12.66□□□□□ -0.38
TRAPPC4-201ENST00000359005 PLCG2P16885 1265 aa12.66□□□□□ -0.38
TRAPPC4-201ENST00000359005 TTLL5Q6EMB2 1281 aa12.66□□□□□ -0.38
TRAPPC4-201ENST00000359005 NOL8Q76FK4 1167 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-201ENST00000359005 IFNL3Q8IZI9 196 aa12.66□□□□□ -0.38
TRAPPC4-201ENST00000359005 TDRD7Q8NHU6 1098 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-201ENST00000359005 FBXW7Q969H0 707 aa12.66□□□□□ -0.38
TRAPPC4-201ENST00000359005 LLPHQ9BRT6 129 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-201ENST00000359005 SUGT1Q9Y2Z0 365 aa12.66□□□□□ -0.38
TRAPPC4-201ENST00000359005 IL1R1P14778 569 aa12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 CHAF1AQ13111 956 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 CSPP1Q1MSJ5 1256 aa12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 CLEC17AQ6ZS10 378 aa12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 MFSD6Q6ZSS7 791 aa12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 Q6ZUG5 572 aa12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 PAXIP1Q6ZW49 1069 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 MOB2Q70IA6 237 aa12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 TMTC2Q8N394 836 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms