RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 PPARAQ07869 468 aa14.82□□□□□ -0.04
GGPS1-202ENST00000358966 KLHL40Q2TBA0 621 aa14.82□□□□□ -0.04
GGPS1-202ENST00000358966 DNTTIP2Q5QJE6 756 aaKnown RBP14.82□□□□□ -0.04
GGPS1-202ENST00000358966 FBXW7Q969H0 707 aa14.82□□□□□ -0.04
GGPS1-202ENST00000358966 ZNF622Q969S3 477 aaKnown RBP eCLIP14.82□□□□□ -0.04
GGPS1-202ENST00000358966 MXD3Q9BW11 206 aa14.82□□□□□ -0.04
GGPS1-202ENST00000358966 LEMD3Q9Y2U8 911 aa14.82□□□□□ -0.04
GGPS1-202ENST00000358966 ADD1P35611 737 aaKnown RBP14.81□□□□□ -0.04
GGPS1-202ENST00000358966 AKNAD1Q5T1N1 836 aa14.81□□□□□ -0.04
GGPS1-202ENST00000358966 MFSD6Q6ZSS7 791 aa14.81□□□□□ -0.04
GGPS1-202ENST00000358966 FAM184AQ8NB25 1140 aa14.81□□□□□ -0.04
GGPS1-202ENST00000358966 NACAP1Q9BZK3 213 aa14.81□□□□□ -0.04
GGPS1-202ENST00000358966 CD209Q9NNX6 404 aa14.81□□□□□ -0.04
GGPS1-202ENST00000358966 TFIP11Q9UBB9 837 aaKnown RBP14.81□□□□□ -0.04
GGPS1-202ENST00000358966 PARP3Q9Y6F1 533 aa14.81□□□□□ -0.04
GGPS1-202ENST00000358966 MYH2Q9UKX2 1941 aa14.81□□□□□ -0.04
GGPS1-202ENST00000358966 COL11A2P13942 1736 aaPredicted RBP14.81□□□□□ -0.04
GGPS1-202ENST00000358966 TDRD7Q8NHU6 1098 aaKnown RBP14.81□□□□□ -0.04
GGPS1-202ENST00000358966 CHMP4CQ96CF2 233 aa14.81□□□□□ -0.04
GGPS1-202ENST00000358966 AIFM3Q96NN9 605 aa14.81□□□□□ -0.04
GGPS1-202ENST00000358966 FTOQ9C0B1 505 aaKnown RBP eCLIP14.81□□□□□ -0.04
GGPS1-202ENST00000358966 TMEM63CQ9P1W3 806 aa14.81□□□□□ -0.04
GGPS1-202ENST00000358966 USP17L12C9JPN9 530 aa14.8□□□□□ -0.04
GGPS1-202ENST00000358966 USP17L21D6R901 530 aa14.8□□□□□ -0.04
GGPS1-202ENST00000358966 FDPSP14324 419 aaKnown RBP14.8□□□□□ -0.04
GGPS1-202ENST00000358966 HOXA10P31260 410 aaPredicted RBP14.8□□□□□ -0.04
GGPS1-202ENST00000358966 ALX1Q15699 326 aa14.8□□□□□ -0.04
GGPS1-202ENST00000358966 ZNF804AQ7Z570 1209 aa14.8□□□□□ -0.04
GGPS1-202ENST00000358966 CMTR1Q8N1G2 835 aaKnown RBP14.8□□□□□ -0.04
GGPS1-202ENST00000358966 ANGEL1Q9UNK9 670 aaKnown RBP14.8□□□□□ -0.04
GGPS1-202ENST00000358966 F8W031 263 aaPredicted RBP14.8□□□□□ -0.04
GGPS1-202ENST00000358966 SH2B2O14492 632 aaPredicted RBP14.8□□□□□ -0.04
GGPS1-202ENST00000358966 DOK7Q18PE1 504 aa14.8□□□□□ -0.04
GGPS1-202ENST00000358966 TMEM67Q5HYA8 995 aa14.8□□□□□ -0.04
GGPS1-202ENST00000358966 BRIP1Q9BX63 1249 aa14.8□□□□□ -0.04
GGPS1-202ENST00000358966 IFIT3O14879 490 aaKnown RBP14.79□□□□□ -0.04
GGPS1-202ENST00000358966 SEMA3EO15041 775 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 LDHBP07195 334 aaKnown RBP14.79□□□□□ -0.04
GGPS1-202ENST00000358966 CDC27P30260 824 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 CEBPZQ03701 1054 aaKnown RBP14.79□□□□□ -0.04
GGPS1-202ENST00000358966 NFXL1Q6ZNB6 911 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 ZSCAN30Q86W11 494 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 CCDC82Q8N4S0 544 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 SMARCC2Q8TAQ2 1214 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 IGDCC4Q8TDY8 1250 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 PHKBQ93100 1093 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 CAMKK2Q96RR4 588 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 LY9Q9HBG7 655 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 KLRG2A4D1S0 409 aaPredicted RBP14.79□□□□□ -0.04
GGPS1-202ENST00000358966 H3BQV1 296 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 BBOX1O75936 387 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 GNAT2P19087 354 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 SLC15A2Q16348 729 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 IFFO2Q5TF58 517 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 ZNF274Q96GC6 653 aaPredicted RBP14.79□□□□□ -0.04
GGPS1-202ENST00000358966 SALL1Q9NSC2 1324 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 USP17L8P0C7I0 530 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 CTR9Q6PD62 1173 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 APOA5Q6Q788 366 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 RGS22Q8NE09 1264 aa14.79□□□□□ -0.04
GGPS1-202ENST00000358966 SH3RF3Q8TEJ3 882 aaPredicted RBP14.79□□□□□ -0.04
GGPS1-202ENST00000358966 DCP1AQ9NPI6 582 aaPredicted RBP14.79□□□□□ -0.04
GGPS1-202ENST00000358966 BAZ2BQ9UIF8 2168 aaKnown RBP14.78□□□□□ -0.04
GGPS1-202ENST00000358966 CCDC88AQ3V6T2 1871 aa14.78□□□□□ -0.04
GGPS1-202ENST00000358966 NMT2O60551 498 aa14.78□□□□□ -0.04
GGPS1-202ENST00000358966 SKOR2Q2VWA4 1001 aaPredicted RBP14.78□□□□□ -0.04
GGPS1-202ENST00000358966 MFSD14BQ5SR56 506 aa14.78□□□□□ -0.04
GGPS1-202ENST00000358966 CRAMP1Q96RY5 1269 aa14.78□□□□□ -0.04
GGPS1-202ENST00000358966 KCNQ5Q9NR82 932 aa14.78□□□□□ -0.04
GGPS1-202ENST00000358966 GTF2IP78347 998 aa14.78□□□□□ -0.04
GGPS1-202ENST00000358966 ZSCAN23Q3MJ62 389 aa14.78□□□□□ -0.04
GGPS1-202ENST00000358966 STAG1Q8WVM7 1258 aa14.78□□□□□ -0.04
GGPS1-202ENST00000358966 DYNC1I1O14576 645 aa14.77□□□□□ -0.04
GGPS1-202ENST00000358966 RANBP6O60518 1105 aaKnown RBP14.77□□□□□ -0.04
GGPS1-202ENST00000358966 IRX3P78415 501 aaPredicted RBP14.77□□□□□ -0.04
GGPS1-202ENST00000358966 ZMYM6O95789 1325 aa14.77□□□□□ -0.05
GGPS1-202ENST00000358966 CPLX1O14810 134 aa14.77□□□□□ -0.05
GGPS1-202ENST00000358966 PDCP20941 246 aa14.77□□□□□ -0.05
GGPS1-202ENST00000358966 ATP2B4P23634 1241 aa14.77□□□□□ -0.05
GGPS1-202ENST00000358966 MSNP26038 577 aaKnown RBP14.77□□□□□ -0.05
GGPS1-202ENST00000358966 METAP2P50579 478 aaKnown RBP eCLIP14.77□□□□□ -0.05
GGPS1-202ENST00000358966 EVCP57679 992 aa14.77□□□□□ -0.05
GGPS1-202ENST00000358966 FAM47AQ5JRC9 791 aa14.77□□□□□ -0.05
GGPS1-202ENST00000358966 SAMD1Q6SPF0 538 aaPredicted RBP14.77□□□□□ -0.05
GGPS1-202ENST00000358966 CGNQ9P2M7 1197 aaKnown RBP14.77□□□□□ -0.05
GGPS1-202ENST00000358966 ATP6V0A2Q9Y487 856 aa14.77□□□□□ -0.05
GGPS1-202ENST00000358966 SYCE3A1L190 88 aa14.76□□□□□ -0.05
GGPS1-202ENST00000358966 TTC6Q86TZ1 520 aa14.76□□□□□ -0.05
GGPS1-202ENST00000358966 DYNLL2Q96FJ2 89 aa14.76□□□□□ -0.05
GGPS1-202ENST00000358966 MCM9Q9NXL9 1143 aa14.76□□□□□ -0.05
GGPS1-202ENST00000358966 SAP30BPQ9UHR5 308 aaKnown RBP14.76□□□□□ -0.05
GGPS1-202ENST00000358966 DUOX1Q9NRD9 1551 aa14.76□□□□□ -0.05
GGPS1-202ENST00000358966 CBX1P83916 185 aa14.76□□□□□ -0.05
GGPS1-202ENST00000358966 C2CD5Q86YS7 1000 aa14.76□□□□□ -0.05
GGPS1-202ENST00000358966 WDR66Q8TBY9 1149 aa14.76□□□□□ -0.05
GGPS1-202ENST00000358966 DBNDD1Q9H9R9 158 aa14.76□□□□□ -0.05
GGPS1-202ENST00000358966 ORC3Q9UBD5 711 aaPredicted RBP14.76□□□□□ -0.05
GGPS1-202ENST00000358966 NPR1P16066 1061 aa14.75□□□□□ -0.05
GGPS1-202ENST00000358966 MAPKAPK5Q8IW41 473 aa14.75□□□□□ -0.05
GGPS1-202ENST00000358966 SLC44A5Q8NCS7 719 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms