RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 HPSEQ9Y251 543 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 DISP2A7MBM2 1401 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 PATL2C9JE40 543 aaKnown RBP9.92□□□□□ -0.82
RFX3-202ENST00000358730 U2AF2P26368 475 aaKnown RBP eCLIP9.92□□□□□ -0.82
RFX3-202ENST00000358730 IL6STP40189 918 aaPredicted RBP9.92□□□□□ -0.82
RFX3-202ENST00000358730 TDO2P48775 406 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 CBX1P83916 185 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 PNOCQ13519 176 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 SYCP1Q15431 976 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 ALX1Q15699 326 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 RRP12Q5JTH9 1297 aaKnown RBP9.92□□□□□ -0.82
RFX3-202ENST00000358730 SMAP1Q8IYB5 467 aaPredicted RBP9.92□□□□□ -0.82
RFX3-202ENST00000358730 MPHOSPH8Q99549 860 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 BCL11BQ9C0K0 894 aaPredicted RBP9.92□□□□□ -0.82
RFX3-202ENST00000358730 FAM217BQ9NTX9 383 aaPredicted RBP9.92□□□□□ -0.82
RFX3-202ENST00000358730 ZSWIM5Q9P217 1185 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 STK36Q9NRP7 1315 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 LIFRP42702 1097 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 SSRP1Q08945 709 aaKnown RBP9.91□□□□□ -0.82
RFX3-202ENST00000358730 RESP18Q5W5W9 173 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 ARMCX5Q6P1M9 558 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 CNNM2Q9H8M5 875 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 IKBKBO14920 756 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 ATP1A3P13637 1013 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 FANCCQ00597 558 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 NAA30Q147X3 362 aaPredicted RBP9.91□□□□□ -0.82
RFX3-202ENST00000358730 AKNAD1Q5T1N1 836 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 ZNF34Q8IZ26 560 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 DOT1LQ8TEK3 1739 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.91□□□□□ -0.82
RFX3-202ENST00000358730 TUBE1Q9UJT0 475 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 STRCQ7RTU9 1775 aa9.91□□□□□ -0.82
RFX3-202ENST00000358730 A0A0G2JS52 829 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 SPDYE4A6NLX3 237 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 PRKAB2O43741 272 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 NRDCO43847 1150 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 CUTAO60888 179 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 FMNL1O95466 1100 aaPredicted RBP9.9□□□□□ -0.82
RFX3-202ENST00000358730 MYL5Q02045 173 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 MFSD6Q6ZSS7 791 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 STK11IPQ8N1F8 1099 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 LCORLQ8N3X6 602 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 ZKSCAN3Q9BRR0 538 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 KRT23Q9C075 422 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 SEC31BQ9NQW1 1179 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 GSG1L2A8MUP6 293 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 SART3Q15020 963 aaKnown RBP9.9□□□□□ -0.82
RFX3-202ENST00000358730 NOSTRINQ8IVI9 506 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 CNNM3Q8NE01 707 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 KIF18AQ8NI77 898 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 WASF1Q92558 559 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 NACAP1Q9BZK3 213 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 KCND1Q9NSA2 647 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 TACC3Q9Y6A5 838 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 SLC4A4Q9Y6R1 1079 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 PLCH1Q4KWH8 1693 aa9.9□□□□□ -0.82
RFX3-202ENST00000358730 FAM237AA0A1B0GTK4 181 aa9.9□□□□□ -0.83
RFX3-202ENST00000358730 SAFBQ15424 915 aaKnown RBP eCLIP9.9□□□□□ -0.83
RFX3-202ENST00000358730 RTN1Q16799 776 aa9.9□□□□□ -0.83
RFX3-202ENST00000358730 SUSD4Q5VX71 490 aa9.9□□□□□ -0.83
RFX3-202ENST00000358730 E4F1Q66K89 784 aaPredicted RBP9.9□□□□□ -0.83
RFX3-202ENST00000358730 METTL16Q86W50 562 aaKnown RBP9.9□□□□□ -0.83
RFX3-202ENST00000358730 TRIM22Q8IYM9 498 aa9.9□□□□□ -0.83
RFX3-202ENST00000358730 AK7Q96M32 723 aa9.9□□□□□ -0.83
RFX3-202ENST00000358730 HSD3B7Q9H2F3 369 aa9.9□□□□□ -0.83
RFX3-202ENST00000358730 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.9□□□□□ -0.83
RFX3-202ENST00000358730 KCNH3Q9ULD8 1083 aa9.9□□□□□ -0.83
RFX3-202ENST00000358730 BTBD18B2RXH4 712 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 KIF2AO00139 706 aaPredicted RBP9.89□□□□□ -0.83
RFX3-202ENST00000358730 SERPINC1P01008 464 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 MMP1P03956 469 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 IFNAR1P17181 557 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 GUCY1A2P33402 732 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 WTAPQ15007 396 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 LONRF3Q496Y0 759 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 OLFM4Q6UX06 510 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 KRBA2Q6ZNG9 492 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 DIS3L2Q8IYB7 885 aaKnown RBP9.89□□□□□ -0.83
RFX3-202ENST00000358730 CCDC82Q8N4S0 544 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 KRI1Q8N9T8 703 aaKnown RBP9.89□□□□□ -0.83
RFX3-202ENST00000358730 MIGA1Q8NAN2 632 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 PPP1R13BQ96KQ4 1090 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 CGNQ9P2M7 1197 aaKnown RBP9.89□□□□□ -0.83
RFX3-202ENST00000358730 ZNF215Q9UL58 517 aaPredicted RBP9.89□□□□□ -0.83
RFX3-202ENST00000358730 KCNJ14Q9UNX9 436 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 BCORQ6W2J9 1755 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 PHLPP1O60346 1717 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 COL14A1Q05707 1796 aaKnown RBP9.89□□□□□ -0.83
RFX3-202ENST00000358730 NID2Q14112 1375 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 ERICH2A1L162 156 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 EXOC5O00471 708 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 GNAT2P19087 354 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 BCAMP50895 628 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 DHX8Q14562 1220 aaKnown RBP9.89□□□□□ -0.83
RFX3-202ENST00000358730 SPECC1Q5M775 1068 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 STAG1Q8WVM7 1258 aa9.89□□□□□ -0.83
RFX3-202ENST00000358730 UBASH3AP57075 661 aa9.88□□□□□ -0.83
RFX3-202ENST00000358730 CFAP100Q494V2 611 aa9.88□□□□□ -0.83
RFX3-202ENST00000358730 UTP14AQ9BVJ6 771 aaKnown RBP9.88□□□□□ -0.83
RFX3-202ENST00000358730 LRP2BPQ9P2M1 347 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms