RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PAG1Q9NWQ8 432 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 RGS12O14924 1447 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 RFC1P35251 1148 aaPredicted RBP9.78□□□□□ -0.84
COL6A6-201ENST00000358511 APOBRQ0VD83 1088 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 GAS2L3Q86XJ1 694 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 KLHL14Q9P2G3 628 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 UHRF1BP1Q6BDS2 1440 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 FRMD3A2A2Y4 597 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 PPP1R13BQ96KQ4 1090 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 CDC37L1Q7L3B6 337 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 ARMC9Q7Z3E5 817 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 SYCE1Q8N0S2 351 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 TXNDC16Q9P2K2 825 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 CCDC151A5D8V7 595 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 TMEM110-MUSTN1A8MSY1 372 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 PPP2R2CQ9Y2T4 447 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 MAST1Q9Y2H9 1570 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 COG7P83436 770 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 APBA1Q02410 837 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 PDE1CQ14123 709 aaPredicted RBP9.78□□□□□ -0.84
COL6A6-201ENST00000358511 MAP3K21Q5TCX8 1036 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 MCTP2Q6DN12 878 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 NFE2L3Q9Y4A8 694 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 NUTM2BA6NNL0 878 aaPredicted RBP9.78□□□□□ -0.84
COL6A6-201ENST00000358511 NUTM2EB1AL46 878 aaPredicted RBP9.78□□□□□ -0.84
COL6A6-201ENST00000358511 POSTNQ15063 836 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 NOC4LQ9BVI4 516 aaKnown RBP9.78□□□□□ -0.84
COL6A6-201ENST00000358511 SEPT10Q9P0V9 454 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 EMILIN1Q9Y6C2 1016 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 FAM135BQ49AJ0 1406 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 POLR2DO15514 142 aaKnown RBP9.78□□□□□ -0.84
COL6A6-201ENST00000358511 RFX1P22670 979 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 ATP1A2P50993 1020 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 SMC1BQ8NDV3 1235 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 FAM83GA6ND36 823 aa9.77□□□□□ -0.84
COL6A6-201ENST00000358511 RGS16O15492 202 aaPredicted RBP9.77□□□□□ -0.84
COL6A6-201ENST00000358511 PAK1Q13153 545 aa9.77□□□□□ -0.84
COL6A6-201ENST00000358511 NAA16Q6N069 864 aaPredicted RBP9.77□□□□□ -0.84
COL6A6-201ENST00000358511 TSPY2A6NKD2 308 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 NR1I2O75469 434 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 GDAP1L1Q96MZ0 367 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 Q9H521 79 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 RNF40O75150 1001 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 EEF2P13639 858 aaKnown RBP9.77□□□□□ -0.85
COL6A6-201ENST00000358511 ERCC3P19447 782 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 TBC1D8BQ0IIM8 1120 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 PPP2R5EQ16537 467 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 CNNM4Q6P4Q7 775 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 TSPYL2Q9H2G4 693 aaPredicted RBP9.77□□□□□ -0.85
COL6A6-201ENST00000358511 TEX14Q8IWB6 1497 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 CUTAO60888 179 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 DBN1Q16643 649 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 PARP2Q9UGN5 583 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 TRPC3Q13507 836 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 THEGQ9P2T0 379 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 IFT140Q96RY7 1462 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 INF2Q27J81 1249 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 SDCCAG8Q86SQ7 713 aaPredicted RBP9.77□□□□□ -0.85
COL6A6-201ENST00000358511 BICD1Q96G01 975 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 KCNH5Q8NCM2 988 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 HOMER3Q9NSC5 361 aa9.77□□□□□ -0.85
COL6A6-201ENST00000358511 GRM8O00222 908 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 SLC9C1Q4G0N8 1177 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 DTHD1Q6ZMT9 781 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 FCHSD1Q86WN1 690 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 OPHN1O60890 802 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 GNAQP50148 359 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 FAN1Q9Y2M0 1017 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 MYO1CO00159 1063 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 GMNNO75496 209 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 CALM1P0DP23 149 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 CALM2P0DP24 149 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 CALM3P0DP25 149 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 MCM7P33993 719 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 PLCB3Q01970 1234 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 RAPGEF1Q13905 1077 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 E2F4Q16254 413 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 EPSTI1Q96J88 318 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 VCX3AQ9NNX9 186 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 NDC80O14777 642 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 EVI5O60447 810 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 KRT9P35527 623 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 RBM5P52756 815 aaKnown RBP eCLIP9.76□□□□□ -0.85
COL6A6-201ENST00000358511 RAD51AP2Q09MP3 1159 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 SLF2Q8IX21 1173 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 BCAP29Q9UHQ4 241 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 MYH6P13533 1939 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 HSPA1LP34931 641 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 KIAA1468Q9P260 1216 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 ZNF652Q9Y2D9 606 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 RIMS2Q9UQ26 1411 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 NOS1P29475 1434 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 IFT88Q13099 833 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 LRRC23Q53EV4 343 aaPredicted RBP9.76□□□□□ -0.85
COL6A6-201ENST00000358511 ANTXR1Q9H6X2 564 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 SLFNL1Q499Z3 407 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 VPS16Q9H269 839 aa9.76□□□□□ -0.85
COL6A6-201ENST00000358511 DDX21Q9NR30 783 aaKnown RBP eCLIP9.76□□□□□ -0.85
COL6A6-201ENST00000358511 VWA3AA6NCI4 1184 aa9.75□□□□□ -0.85
COL6A6-201ENST00000358511 PNMA6AP0CW24 399 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms