RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 STOX1Q6ZVD7 989 aa11.38□□□□□ -0.59
RNF40-202ENST00000357890 GPR161Q8N6U8 529 aaKnown RBP11.38□□□□□ -0.59
RNF40-202ENST00000357890 EIF3CQ99613 913 aaKnown RBP11.38□□□□□ -0.59
RNF40-202ENST00000357890 BAG1Q99933 345 aaPredicted RBP11.38□□□□□ -0.59
RNF40-202ENST00000357890 ADKP55263 362 aaKnown RBP11.37□□□□□ -0.59
RNF40-202ENST00000357890 CCDC102BQ68D86 513 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 GBP6Q6ZN66 633 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 TRIM22Q8IYM9 498 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 ZNF609O15014 1411 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 CHD2O14647 1828 aaKnown RBP11.37□□□□□ -0.59
RNF40-202ENST00000357890 ERVV-2B6SEH9 535 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 ERLIN2O94905 339 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 SSBP05455 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
RNF40-202ENST00000357890 MYSM1Q5VVJ2 828 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 ANO1Q5XXA6 986 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 TEX13AQ9BXU3 409 aaPredicted RBP11.37□□□□□ -0.59
RNF40-202ENST00000357890 CTAGE15A4D2H0 777 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 GOLGA8AA7E2F4 631 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 CTAGE8P0CG41 777 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 IL2RBP14784 551 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 CC2D1AQ6P1N0 951 aaPredicted RBP11.37□□□□□ -0.59
RNF40-202ENST00000357890 CTAGE6Q86UF2 777 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 TEX2Q8IWB9 1127 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 CTAGE4Q8IX94 777 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 FAM89AQ96GI7 184 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 XAGE2Q96GT9 111 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 SLC26A6Q9BXS9 759 aa11.37□□□□□ -0.59
RNF40-202ENST00000357890 LTN1O94822 1766 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 IFIT3O14879 490 aaKnown RBP11.36□□□□□ -0.59
RNF40-202ENST00000357890 CLGNO14967 610 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 MATR3P43243 847 aaKnown RBP eCLIP11.36□□□□□ -0.59
RNF40-202ENST00000357890 CCZ1BP86790 482 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 CCZ1P86791 482 aaPredicted RBP11.36□□□□□ -0.59
RNF40-202ENST00000357890 LONRF3Q496Y0 759 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 SPECC1Q5M775 1068 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 EP400NLQ6ZTU2 488 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 PHKBQ93100 1093 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 PLCD4Q9BRC7 762 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 PUS3Q9BZE2 481 aaKnown RBP11.36□□□□□ -0.59
RNF40-202ENST00000357890 MAST3O60307 1309 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 TMEM67Q5HYA8 995 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 E4F1Q66K89 784 aaPredicted RBP11.36□□□□□ -0.59
RNF40-202ENST00000357890 BRAPQ7Z569 592 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 CAPZA3Q96KX2 299 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 SLC12A7Q9Y666 1083 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 ZEB2O60315 1214 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 FGAP02671 866 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 NAP1L1P55209 391 aaKnown RBP11.36□□□□□ -0.59
RNF40-202ENST00000357890 IQCB1Q15051 598 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 TTC19Q6DKK2 380 aaPredicted RBP11.36□□□□□ -0.59
RNF40-202ENST00000357890 SMARCC2Q8TAQ2 1214 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 APPBP2Q92624 585 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 NAPBQ9H115 298 aa11.36□□□□□ -0.59
RNF40-202ENST00000357890 A0A0G2JLW4 131 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 ANKRD18BA2A2Z9 1011 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 CIAO1O76071 339 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 ADD1P35611 737 aaKnown RBP11.35□□□□□ -0.59
RNF40-202ENST00000357890 FOXO4P98177 505 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 EXOC4Q96A65 974 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 MYL10Q9BUA6 226 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 CARMIL3Q8ND23 1372 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
RNF40-202ENST00000357890 ZBTB43O43298 467 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 ATP1A3P13637 1013 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 PFKFB1P16118 471 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 FILIP1LQ4L180 1135 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 AFAP1L1Q8TED9 768 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 ATG3Q9NT62 314 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 IMPACTQ9P2X3 320 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 GOLGA6L9A6NEM1 432 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 NBPF26B4DH59 902 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 GPAA1O43292 621 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 CDC25BP30305 580 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 ATP6V1AP38606 617 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 ZAP70P43403 619 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 TCIRG1Q13488 830 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 TTF1Q15361 905 aaPredicted RBP11.35□□□□□ -0.59
RNF40-202ENST00000357890 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 NBPF10Q6P3W6 841 aaKnown RBP11.35□□□□□ -0.59
RNF40-202ENST00000357890 NYAP1Q6ZVC0 841 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 ATG9AQ7Z3C6 839 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 NBPF15Q8N660 670 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 OSBP2Q969R2 916 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 DHX58Q96C10 678 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 FAM204AQ9H8W3 233 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 PPP2R2CQ9Y2T4 447 aa11.35□□□□□ -0.59
RNF40-202ENST00000357890 NF2P35240 595 aa11.34□□□□□ -0.59
RNF40-202ENST00000357890 MAGEA9P43362 315 aa11.34□□□□□ -0.59
RNF40-202ENST00000357890 CCT5P48643 541 aa11.34□□□□□ -0.59
RNF40-202ENST00000357890 DNA2P51530 1060 aa11.34□□□□□ -0.59
RNF40-202ENST00000357890 MYL5Q02045 173 aa11.34□□□□□ -0.59
RNF40-202ENST00000357890 LINC00301Q8NCQ3 95 aa11.34□□□□□ -0.59
RNF40-202ENST00000357890 CCDC148Q8NFR7 591 aa11.34□□□□□ -0.59
RNF40-202ENST00000357890 MED1Q15648 1581 aaPredicted RBP11.34□□□□□ -0.59
RNF40-202ENST00000357890 PSDA5PKW4 1024 aaPredicted RBP11.34□□□□□ -0.59
RNF40-202ENST00000357890 B4E1Z4 1266 aa11.34□□□□□ -0.59
RNF40-202ENST00000357890 CCDC175P0C221 793 aa11.34□□□□□ -0.59
RNF40-202ENST00000357890 SARM1Q6SZW1 724 aa11.34□□□□□ -0.59
RNF40-202ENST00000357890 PI16Q6UXB8 463 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms