RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 BRD3Q15059 726 aa14.24□□□□□ -0.13
BDNF-202ENST00000356660 VSTM4Q8IW00 320 aa14.24□□□□□ -0.13
BDNF-202ENST00000356660 MYCBPQ99417 103 aaPredicted RBP14.24□□□□□ -0.13
BDNF-202ENST00000356660 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
BDNF-202ENST00000356660 KDRP35968 1356 aa14.24□□□□□ -0.13
BDNF-202ENST00000356660 E2F4Q16254 413 aa14.24□□□□□ -0.13
BDNF-202ENST00000356660 SLC9C2Q5TAH2 1124 aa14.24□□□□□ -0.13
BDNF-202ENST00000356660 CADPS2Q86UW7 1296 aa14.24□□□□□ -0.13
BDNF-202ENST00000356660 ZCRB1Q8TBF4 217 aaKnown RBP14.24□□□□□ -0.13
BDNF-202ENST00000356660 HAUS7Q99871 368 aa14.24□□□□□ -0.13
BDNF-202ENST00000356660 USP32Q8NFA0 1604 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 MAP3K12Q12852 859 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 MTF1Q14872 753 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 POSTNQ15063 836 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 RRAGBQ5VZM2 374 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 GPIHBP1Q8IV16 184 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 METTL22Q9BUU2 404 aaPredicted RBP14.23□□□□□ -0.13
BDNF-202ENST00000356660 EFCC1Q9HA90 598 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 SAMSN1Q9NSI8 373 aaKnown RBP14.23□□□□□ -0.13
BDNF-202ENST00000356660 CTDP1Q9Y5B0 961 aaPredicted RBP14.23□□□□□ -0.13
BDNF-202ENST00000356660 VWDEQ8N2E2 1590 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 ZMYND10O75800 440 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 USP5P45974 858 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 RNF187Q5TA31 235 aaPredicted RBP14.23□□□□□ -0.13
BDNF-202ENST00000356660 ENGASEQ8NFI3 743 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 WASF1Q92558 559 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 NAPGQ99747 312 aaPredicted RBP14.23□□□□□ -0.13
BDNF-202ENST00000356660 PPP1R1BQ9UD71 204 aaPredicted RBP14.23□□□□□ -0.13
BDNF-202ENST00000356660 STX10O60499 249 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 SRGAP1Q7Z6B7 1085 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 CMTR1Q8N1G2 835 aaKnown RBP14.23□□□□□ -0.13
BDNF-202ENST00000356660 POLR3EQ9NVU0 708 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 ROBO2Q9HCK4 1378 aa14.23□□□□□ -0.13
BDNF-202ENST00000356660 NEXMIFQ5QGS0 1516 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 CHD1O14646 1710 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 CCDC151A5D8V7 595 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 IKBKBO14920 756 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 SMARCC2Q8TAQ2 1214 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 AFAP1L1Q8TED9 768 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 EXOC4Q96A65 974 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 DSCC1Q9BVC3 393 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 ABCB6Q9NP58 842 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 CEP131Q9UPN4 1083 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 CTDNEP1O95476 244 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 FGAP02671 866 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 IL15P40933 162 aaPredicted RBP14.22□□□□□ -0.13
BDNF-202ENST00000356660 RBM5P52756 815 aaKnown RBP eCLIP14.22□□□□□ -0.13
BDNF-202ENST00000356660 SLC35F6Q8N357 371 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 IP6K1Q92551 441 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 CDK5RAP3Q96JB5 506 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 CDC5LQ99459 802 aaKnown RBP14.22□□□□□ -0.13
BDNF-202ENST00000356660 EBAG9O00559 213 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 DEPDC5O75140 1603 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 SLC39A14Q15043 492 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 ZSCAN29Q8IWY8 852 aaPredicted RBP14.22□□□□□ -0.13
BDNF-202ENST00000356660 FAM204AQ9H8W3 233 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 SUGCTQ9HAC7 445 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 CABP5Q9NP86 173 aa14.22□□□□□ -0.13
BDNF-202ENST00000356660 ATP8B1O43520 1251 aa14.21□□□□□ -0.13
BDNF-202ENST00000356660 ZNF790Q6PG37 636 aa14.21□□□□□ -0.13
BDNF-202ENST00000356660 DIS3L2Q8IYB7 885 aaKnown RBP14.21□□□□□ -0.13
BDNF-202ENST00000356660 PARP3Q9Y6F1 533 aa14.21□□□□□ -0.13
BDNF-202ENST00000356660 ALKQ9UM73 1620 aa14.21□□□□□ -0.13
BDNF-202ENST00000356660 USP6P35125 1406 aa14.21□□□□□ -0.13
BDNF-202ENST00000356660 FOXN1O15353 648 aa14.21□□□□□ -0.13
BDNF-202ENST00000356660 ZEB2O60315 1214 aa14.21□□□□□ -0.13
BDNF-202ENST00000356660 KIF23Q02241 960 aaPredicted RBP14.21□□□□□ -0.13
BDNF-202ENST00000356660 CCDC43Q96MW1 224 aaKnown RBP14.21□□□□□ -0.13
BDNF-202ENST00000356660 TBX22Q9Y458 520 aa14.21□□□□□ -0.13
BDNF-202ENST00000356660 KNDC1Q76NI1 1749 aa14.21□□□□□ -0.14
BDNF-202ENST00000356660 GPAA1O43292 621 aa14.21□□□□□ -0.14
BDNF-202ENST00000356660 CUTAO60888 179 aa14.21□□□□□ -0.14
BDNF-202ENST00000356660 TBC1D8O95759 1140 aa14.21□□□□□ -0.14
BDNF-202ENST00000356660 CDC23Q9UJX2 597 aa14.21□□□□□ -0.14
BDNF-202ENST00000356660 ANGEL1Q9UNK9 670 aaKnown RBP14.21□□□□□ -0.14
BDNF-202ENST00000356660 BTBD18B2RXH4 712 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 ENC1O14682 589 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 IGKV5-2P06315 115 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 LIG3P49916 1009 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 PTPN12Q05209 780 aaKnown RBP14.2□□□□□ -0.14
BDNF-202ENST00000356660 SMYD4Q8IYR2 804 aaPredicted RBP14.2□□□□□ -0.14
BDNF-202ENST00000356660 MLKLQ8NB16 471 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 FAM89AQ96GI7 184 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 ZNF496Q96IT1 587 aaPredicted RBP14.2□□□□□ -0.14
BDNF-202ENST00000356660 MAST3O60307 1309 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 KRT9P35527 623 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 USP8P40818 1118 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 LRRC24Q50LG9 513 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 ACRBPQ8NEB7 543 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 hCG_1642624A0A1W2PR95 340 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 A1BGP04217 495 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 ANKIB1Q9P2G1 1089 aa14.2□□□□□ -0.14
BDNF-202ENST00000356660 USP42Q9H9J4 1324 aaKnown RBP14.2□□□□□ -0.14
BDNF-202ENST00000356660 MLH3Q9UHC1 1453 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 KRT18P05783 430 aaKnown RBP14.19□□□□□ -0.14
BDNF-202ENST00000356660 EPS15P42566 896 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 CAVIN4Q5BKX8 364 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 CCDC122Q5T0U0 273 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 KANK3Q6NY19 840 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 PPM1EQ8WY54 764 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms