RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PRDM4Q9UKN5 801 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 PAXBP1Q9Y5B6 917 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 CCT6AP40227 531 aaKnown RBP6.2□□□□□ -1.42
PTPRD-202ENST00000356435 EAPPQ56P03 285 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-202ENST00000356435 LMBR1LQ6UX01 489 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 Q6ZUG5 572 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 MIGA1Q8NAN2 632 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 SMCR8Q8TEV9 937 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-202ENST00000356435 PLCD1P51178 756 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 DCAF17Q5H9S7 520 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-202ENST00000356435 TTC37Q6PGP7 1564 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 BRAPQ7Z569 592 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 JARID2Q92833 1246 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-202ENST00000356435 CCDC42Q96M95 316 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 CALCOCO1Q9P1Z2 691 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 MYOM2P54296 1465 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 BAG6P46379 1132 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 TNFAIP1Q13829 316 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 TBC1D9Q6ZT07 1266 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 NOLC1Q14978 699 aaKnown RBP eCLIP6.2□□□□□ -1.42
PTPRD-202ENST00000356435 AS3MTQ9HBK9 375 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 PLA2R1Q13018 1463 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 YTHDC2Q9H6S0 1430 aaKnown RBP6.2□□□□□ -1.42
PTPRD-202ENST00000356435 CCDC169A6NNP5 214 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 ADCY5O95622 1261 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 ERCC5P28715 1186 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-202ENST00000356435 RAPGEF1Q13905 1077 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 NCAPGQ9BPX3 1015 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 GIPC1O14908 333 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 IDI1Q13907 227 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 DPP8Q6V1X1 898 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-202ENST00000356435 ASXL2Q76L83 1435 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 C19orf44Q9H6X5 657 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 ZFYVE9O95405 1425 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 TRAPPC8Q9Y2L5 1435 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 FYB2Q5VWT5 728 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 FAM200AQ8TCP9 573 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 CD2APQ9Y5K6 639 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 RLBP1P12271 317 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 ATF7P17544 494 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-202ENST00000356435 NMIQ13287 307 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-202ENST00000356435 CCDC89Q8N998 374 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 LMBRD1Q9NUN5 540 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 SAP30BPQ9UHR5 308 aaKnown RBP6.19□□□□□ -1.42
PTPRD-202ENST00000356435 UBL4BQ8N7F7 174 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 TUBB4BP68371 445 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 PPP1R21Q6ZMI0 780 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 DTHD1Q6ZMT9 781 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 SAMD15Q9P1V8 674 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 GOLGA6CA6NDK9 693 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 GOLGA6BA6NDN3 693 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 SPTLC2O15270 562 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 GOLGA6DP0CG33 693 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 ADCY7P51828 1080 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 ITIH3Q06033 890 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 ISM2Q6H9L7 571 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 GOLGA6AQ9NYA3 693 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 TFIP11Q9UBB9 837 aaKnown RBP6.19□□□□□ -1.42
PTPRD-202ENST00000356435 ZNF518AQ6AHZ1 1483 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 ABCC1P33527 1531 aa6.19□□□□□ -1.42
PTPRD-202ENST00000356435 ARHGEF35A5YM69 484 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 PPFIA3O75145 1194 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 ATP2C2O75185 946 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 IQUBQ8NA54 791 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 SRRTQ9BXP5 876 aaKnown RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 KCNG1Q9UIX4 513 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 FAM83GA6ND36 823 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 MYCLP12524 364 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 PABPC4Q13310 644 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 SEPT6Q14141 434 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 PUM3Q15397 648 aaKnown RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 CNNM4Q6P4Q7 775 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 EP400NLQ6ZTU2 488 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 CCDC121Q6ZUS5 278 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 LEO1Q8WVC0 666 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 NKIRAS1Q9NYS0 192 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 USP48Q86UV5 1035 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 LZTS2Q9BRK4 669 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 RBM8AQ9Y5S9 174 aaKnown RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 CSADQ9Y600 493 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 TRPM1Q7Z4N2 1603 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 SPOPO43791 374 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 MARCKSP29966 332 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 KRT9P35527 623 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 VAV2P52735 878 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 SLC39A6Q13433 755 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 GPR162Q16538 588 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 GPCPD1Q9NPB8 672 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 CCDC160A6NGH7 325 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 TSHZ3Q63HK5 1081 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 OTUD7BQ6GQQ9 843 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 SEC62Q99442 399 aaKnown RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 LARP6Q9BRS8 491 aaKnown RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 PRKAG2Q9UGJ0 569 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 SSH2Q76I76 1423 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 PLCB4Q15147 1175 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 RIOK1Q9BRS2 568 aaKnown RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 PTPRTO14522 1441 aa6.18□□□□□ -1.42
PTPRD-202ENST00000356435 CYP2E1P05181 493 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-202ENST00000356435 RAB3IPQ96QF0 476 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms