RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 BOLA2Q9H3K6 86 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 GRPEL1Q9HAV7 217 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 PRR12Q9ULL5 1215 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 ZSCAN22P10073 491 aaPredicted RBP9.45□□□□□ -0.9
COMMD9-202ENST00000355500 GPR162Q16538 588 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 BLOC1S2Q6QNY1 142 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 FAM227BQ96M60 508 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 JAKMIP1Q96N16 626 aaKnown RBP9.45□□□□□ -0.9
COMMD9-202ENST00000355500 DBNDD2Q9BQY9 259 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 INO80BQ9C086 356 aaPredicted RBP9.45□□□□□ -0.9
COMMD9-202ENST00000355500 SYNRGQ9UMZ2 1314 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 CTSWP56202 376 aa9.44□□□□□ -0.9
COMMD9-202ENST00000355500 E2F5Q15329 346 aa9.44□□□□□ -0.9
COMMD9-202ENST00000355500 ZSCAN25Q6NSZ9 544 aa9.44□□□□□ -0.9
COMMD9-202ENST00000355500 RSPH9Q9H1X1 276 aaPredicted RBP9.44□□□□□ -0.9
COMMD9-202ENST00000355500 SUDS3Q9H7L9 328 aaPredicted RBP9.44□□□□□ -0.9
COMMD9-202ENST00000355500 ASAP1Q9ULH1 1129 aa9.44□□□□□ -0.9
COMMD9-202ENST00000355500 G3BP2Q9UN86 482 aaKnown RBP9.44□□□□□ -0.9
COMMD9-202ENST00000355500 DDX49Q9Y6V7 483 aaKnown RBP9.44□□□□□ -0.9
COMMD9-202ENST00000355500 MROH5Q6ZUA9 1318 aa9.44□□□□□ -0.9
COMMD9-202ENST00000355500 MAST2Q6P0Q8 1798 aa9.44□□□□□ -0.9
COMMD9-202ENST00000355500 PPP1R12AO14974 1030 aaPredicted RBP9.44□□□□□ -0.9
COMMD9-202ENST00000355500 PDE8AO60658 829 aa9.44□□□□□ -0.9
COMMD9-202ENST00000355500 EIF3JO75822 258 aaKnown RBP9.44□□□□□ -0.9
COMMD9-202ENST00000355500 CD151P48509 253 aa9.44□□□□□ -0.9
COMMD9-202ENST00000355500 EIF5P55010 431 aaKnown RBP9.44□□□□□ -0.9
COMMD9-202ENST00000355500 TTF1Q15361 905 aaPredicted RBP9.44□□□□□ -0.9
COMMD9-202ENST00000355500 CCDC158Q5M9N0 1113 aa9.44□□□□□ -0.9
COMMD9-202ENST00000355500 ELP1O95163 1332 aa9.44□□□□□ -0.9
COMMD9-202ENST00000355500 RNF113AO15541 343 aaKnown RBP9.43□□□□□ -0.9
COMMD9-202ENST00000355500 ZSCAN20P17040 1043 aaPredicted RBP9.43□□□□□ -0.9
COMMD9-202ENST00000355500 RBM5P52756 815 aaKnown RBP eCLIP9.43□□□□□ -0.9
COMMD9-202ENST00000355500 IFIT5Q13325 482 aaKnown RBP9.43□□□□□ -0.9
COMMD9-202ENST00000355500 MCTP1Q6DN14 999 aa9.43□□□□□ -0.9
COMMD9-202ENST00000355500 VGLL2Q8N8G2 317 aa9.43□□□□□ -0.9
COMMD9-202ENST00000355500 SNRNP27Q8WVK2 155 aaKnown RBP9.43□□□□□ -0.9
COMMD9-202ENST00000355500 UPF3BQ9BZI7 483 aaKnown RBP9.43□□□□□ -0.9
COMMD9-202ENST00000355500 ZBTB3Q9H5J0 574 aa9.43□□□□□ -0.9
COMMD9-202ENST00000355500 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
COMMD9-202ENST00000355500 DUOX1Q9NRD9 1551 aa9.43□□□□□ -0.9
COMMD9-202ENST00000355500 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.43□□□□□ -0.9
COMMD9-202ENST00000355500 A0A1B0GUL7 405 aa9.43□□□□□ -0.9
COMMD9-202ENST00000355500 STX6O43752 255 aa9.43□□□□□ -0.9
COMMD9-202ENST00000355500 XRCC6P12956 609 aaKnown RBP eCLIP9.43□□□□□ -0.9
COMMD9-202ENST00000355500 EVCP57679 992 aa9.43□□□□□ -0.9
COMMD9-202ENST00000355500 KLHDC4Q8TBB5 520 aa9.43□□□□□ -0.9
COMMD9-202ENST00000355500 CCDC87Q9NVE4 849 aa9.43□□□□□ -0.9
COMMD9-202ENST00000355500 CTNNA3Q9UI47 895 aa9.43□□□□□ -0.9
COMMD9-202ENST00000355500 FER1L6Q2WGJ9 1857 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 ANKRD18BA2A2Z9 1011 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 F13A1P00488 732 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 UQCRFS1P1P0C7P4 283 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 LINC00116Q8NCU8 138 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 SLC4A9Q96Q91 983 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 SEZ6LQ9BYH1 1024 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 GTPBP4Q9BZE4 634 aaKnown RBP9.42□□□□□ -0.9
COMMD9-202ENST00000355500 IFIT1P09914 478 aaKnown RBP9.42□□□□□ -0.9
COMMD9-202ENST00000355500 SKILP12757 684 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 YBX3P16989 372 aaKnown RBP eCLIP9.42□□□□□ -0.9
COMMD9-202ENST00000355500 FSTL1Q12841 308 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 HS1BP3Q53T59 392 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 CCDC70Q6NSX1 233 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 ZNF589Q86UQ0 364 aaPredicted RBP9.42□□□□□ -0.9
COMMD9-202ENST00000355500 OGFOD1Q8N543 542 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 TTLL11Q8NHH1 800 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 PPP1R9BQ96SB3 815 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 SENP7Q9BQF6 1050 aa9.42□□□□□ -0.9
COMMD9-202ENST00000355500 KCNJ4P48050 445 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 POU5F1Q01860 360 aaKnown RBP9.41□□□□□ -0.9
COMMD9-202ENST00000355500 CCDC173Q0VFZ6 552 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 PKP1Q13835 747 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 ADCK5Q3MIX3 580 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 ATL3Q6DD88 541 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 PDILTQ8N807 584 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 NEK1Q96PY6 1258 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 RPS6KC1Q96S38 1066 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 SWAP70Q9UH65 585 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 RTCBQ9Y3I0 505 aaKnown RBP9.41□□□□□ -0.9
COMMD9-202ENST00000355500 hCG_2014768A0A024R1R8 64 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 SYT1P21579 422 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 TOB2Q14106 344 aaPredicted RBP9.41□□□□□ -0.9
COMMD9-202ENST00000355500 ZSCAN23Q3MJ62 389 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.41□□□□□ -0.9
COMMD9-202ENST00000355500 IQSEC3Q9UPP2 1182 aaPredicted RBP9.41□□□□□ -0.9
COMMD9-202ENST00000355500 KIF3AQ9Y496 699 aa9.41□□□□□ -0.9
COMMD9-202ENST00000355500 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.4□□□□□ -0.9
COMMD9-202ENST00000355500 UBE2HP62256 183 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 NAALADL2Q58DX5 795 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 TRAPPC3LQ5T215 181 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 INTS5Q6P9B9 1019 aaKnown RBP9.4□□□□□ -0.9
COMMD9-202ENST00000355500 C16orf87Q6PH81 154 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 LRSAM1Q6UWE0 723 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 GPT2Q8TD30 523 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 APPBP2Q92624 585 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 GTF3C6Q969F1 213 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 SPACA7Q96KW9 195 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 AGBL1Q96MI9 1066 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 PAGR1Q9BTK6 254 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 LTBP3Q9NS15 1303 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 FGFR2P21802 821 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms