RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 H7C1D1 291 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 C10orf67Q8IYJ2 551 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 RSRC1Q96IZ7 334 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 TTC1Q99614 292 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 ZC4H2Q9NQZ6 224 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 ZBTB43O43298 467 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 KRT86O43790 486 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 LRRC23Q53EV4 343 aaPredicted RBP12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 CCDC42Q96M95 316 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 WIZO95785 1651 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 SAT1P21673 171 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 GNA11P29992 359 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 PRDM10Q9NQV6 1147 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 MCM9Q9NXL9 1143 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 CDV3Q9UKY7 258 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 NEMFO60524 1076 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 GTF2A1P52655 376 aaPredicted RBP12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 SLC17A8Q8NDX2 589 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 NIP7Q9Y221 180 aaKnown RBP eCLIP12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 MX1P20591 662 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 FCHSD1Q86WN1 690 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 UBL4BQ8N7F7 174 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 RSPH14Q9UHP6 348 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 BCAP29Q9UHQ4 241 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 UTP11Q9Y3A2 253 aaKnown RBP12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 FOXD4Q12950 439 aaPredicted RBP12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 DUSP27Q5VZP5 1158 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 ABT1Q9ULW3 272 aaKnown RBP12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 SLC4A1P02730 911 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 CD19P15391 556 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 KRT83P78385 493 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 UBXN1Q04323 297 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 FGD4Q96M96 766 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 SETSIPP0DME0 302 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 SUGT1Q9Y2Z0 365 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 ZBED4O75132 1171 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 TAF7Q15545 349 aaPredicted RBP12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 SLC12A1Q13621 1099 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 SESTD1Q86VW0 696 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 RBM17Q96I25 401 aaKnown RBP12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 TSGA10Q9BZW7 698 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 ARHGAP24Q8N264 748 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 PAGR1Q9BTK6 254 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 ST7Q9NRC1 585 aa12.79□□□□□ -0.36
NUDCD3-202ENST00000355451 UBXN8O00124 270 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 EFCAB14O75071 495 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 DBN1Q16643 649 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 TPTE2Q6XPS3 522 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 FASTKD5Q7L8L6 764 aaKnown RBP12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 IFNLR1Q8IU57 520 aaPredicted RBP12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 LDHBP07195 334 aaKnown RBP12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 GLG1Q92896 1179 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 CCDC124Q96CT7 223 aaKnown RBP12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 TAF11Q15544 211 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 ARFGAP3Q9NP61 516 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 TRPC6Q9Y210 931 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 NAIPQ13075 1403 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 ARHGAP4P98171 946 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 GADL1Q6ZQY3 521 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 MMS19Q96T76 1030 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 POLIQ9UNA4 740 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 ZKSCAN5Q9Y2L8 839 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 POLR2BP30876 1174 aaKnown RBP12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 ATICP31939 592 aa12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 SUDS3Q9H7L9 328 aaPredicted RBP12.78□□□□□ -0.36
NUDCD3-202ENST00000355451 TNFAIP3P21580 790 aa12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 DTHD1Q6ZMT9 781 aa12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 MICALL1Q8N3F8 863 aa12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 ATP6V1E2Q96A05 226 aa12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 CPSF3Q9UKF6 684 aaKnown RBP12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 HGSO14964 777 aaPredicted RBP12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 MMEL1Q495T6 779 aa12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 ZMAT2Q96NC0 199 aaKnown RBP12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 ARHGEF35A5YM69 484 aa12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 MIER3Q7Z3K6 550 aa12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 LARGE2Q8N3Y3 721 aa12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 MTRQ99707 1265 aa12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 TRIM55Q9BYV6 548 aa12.77□□□□□ -0.36
NUDCD3-202ENST00000355451 SYNDIG1LA6NDD5 238 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 FOXO3O43524 673 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 TTC31Q49AM3 519 aaPredicted RBP12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 GIMAP4Q9NUV9 329 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 JAG2Q9Y219 1238 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 PTK2BQ14289 1009 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 CPXCR1Q8N123 301 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.77□□□□□ -0.375e-9■■□□□ 13.9
NUDCD3-202ENST00000355451 ZRANB2O95218 330 aaKnown RBP eCLIP12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 TBC1D8O95759 1140 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 LMNB1P20700 586 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 DNAJC7Q99615 494 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 MAP3K2Q9Y2U5 619 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 KRT2P35908 639 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 TNNC1P63316 161 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 ALG1Q9BT22 464 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 PLCB1Q9NQ66 1216 aa12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 TFIP11Q9UBB9 837 aaKnown RBP12.77□□□□□ -0.37
NUDCD3-202ENST00000355451 DNAJC8O75937 253 aaPredicted RBP12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 VAV2P52735 878 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms