RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 TOB2Q14106 344 aaPredicted RBP11.37□□□□□ -0.59
NPHP1-202ENST00000355301 DDX60LQ5H9U9 1706 aaKnown RBP11.37□□□□□ -0.59
NPHP1-202ENST00000355301 APOBEC3HQ6NTF7 200 aaKnown RBP11.37□□□□□ -0.59
NPHP1-202ENST00000355301 MFSD6Q6ZSS7 791 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 TEX11Q8IYF3 940 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 NAV1Q8NEY1 1877 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 TGFBRAP1Q8WUH2 860 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 TCEANC2Q96MN5 208 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 GMLQ99445 158 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 RNF41Q9H4P4 317 aaPredicted RBP11.37□□□□□ -0.59
NPHP1-202ENST00000355301 NEDD4P46934 1319 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 MINDY4BA8MYZ0 360 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 FGRP09769 529 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 PCP11498 1178 aaKnown RBP11.37□□□□□ -0.59
NPHP1-202ENST00000355301 CXCL9Q07325 125 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 Q6ZUG5 572 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 NOL8Q76FK4 1167 aaKnown RBP11.37□□□□□ -0.59
NPHP1-202ENST00000355301 KRT23Q9C075 422 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 MCM9Q9NXL9 1143 aa11.37□□□□□ -0.59
NPHP1-202ENST00000355301 HSP90AA1P07900 732 aaKnown RBP11.36□□□□□ -0.59
NPHP1-202ENST00000355301 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
NPHP1-202ENST00000355301 AGBL3Q8NEM8 1001 aa11.36□□□□□ -0.59
NPHP1-202ENST00000355301 ZSCAN31Q96LW9 406 aaPredicted RBP11.36□□□□□ -0.59
NPHP1-202ENST00000355301 SH2B1Q9NRF2 756 aaPredicted RBP11.36□□□□□ -0.59
NPHP1-202ENST00000355301 TACC3Q9Y6A5 838 aa11.36□□□□□ -0.59
NPHP1-202ENST00000355301 FLT1P17948 1338 aa11.36□□□□□ -0.59
NPHP1-202ENST00000355301 ECM29Q5VYK3 1845 aa11.36□□□□□ -0.59
NPHP1-202ENST00000355301 CYP2D7A0A087X1C5 515 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 B4E1Z4 1266 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 USP17L8P0C7I0 530 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 PRELPP51888 382 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 ANTXR2P58335 489 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 RASSF7Q02833 373 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 C12orf60Q5U649 245 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 CDC42EP5Q6NZY7 148 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 MAPKAPK5Q8IW41 473 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 INTS4Q96HW7 963 aaKnown RBP11.35□□□□□ -0.59
NPHP1-202ENST00000355301 INCENPQ9NQS7 918 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 TPCN1Q9ULQ1 816 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 ROBO3Q96MS0 1386 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 SMIM22K7EJ46 135 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 PRC1O43663 620 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 WDHD1O75717 1129 aaPredicted RBP11.35□□□□□ -0.59
NPHP1-202ENST00000355301 SLC3A2P08195 630 aaKnown RBP11.35□□□□□ -0.59
NPHP1-202ENST00000355301 DDIT3P35638 169 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 FGD1P98174 961 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 ME3Q16798 604 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 CIAPIN1Q6FI81 312 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 CHST3Q7LGC8 479 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 AMOTL1Q8IY63 956 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 LARP6Q9BRS8 491 aaKnown RBP11.35□□□□□ -0.59
NPHP1-202ENST00000355301 LRRC2Q9BYS8 371 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 SLKQ9H2G2 1235 aaPredicted RBP11.35□□□□□ -0.59
NPHP1-202ENST00000355301 USP40Q9NVE5 1235 aa11.35□□□□□ -0.59
NPHP1-202ENST00000355301 FZD9O00144 591 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 LARGE1O95461 756 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 NT5C2P49902 561 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 EVCP57679 992 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 TNIP1Q15025 636 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 CYB5R4Q7L1T6 521 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 OGFOD1Q8N543 542 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 BRF1Q92994 677 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 MTA3Q9BTC8 594 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 ZSWIM5Q9P217 1185 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 HDAC9Q9UKV0 1011 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
NPHP1-202ENST00000355301 ZBTB12Q9Y330 459 aaPredicted RBP11.34□□□□□ -0.59
NPHP1-202ENST00000355301 MYH1P12882 1939 aa11.34□□□□□ -0.59
NPHP1-202ENST00000355301 ORC4O43929 436 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 KDM4AO75164 1064 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 CYP2D6P10635 497 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 MMP14P50281 582 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 RBM5P52756 815 aaKnown RBP eCLIP11.33□□□□□ -0.6
NPHP1-202ENST00000355301 EVX2Q03828 476 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 CFAP100Q494V2 611 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 ESR2Q92731 530 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 TMEM87BQ96K49 555 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 PCDHAC2Q9Y5I4 1007 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 DICER1Q9UPY3 1922 aaKnown RBP11.33□□□□□ -0.6
NPHP1-202ENST00000355301 NPM3O75607 178 aaKnown RBP11.33□□□□□ -0.6
NPHP1-202ENST00000355301 POLR3DP05423 398 aaPredicted RBP11.33□□□□□ -0.6
NPHP1-202ENST00000355301 LMNB1P20700 586 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 RPS12P25398 132 aaKnown RBP11.33□□□□□ -0.6
NPHP1-202ENST00000355301 PLCD1P51178 756 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 PDE4BQ07343 736 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 ARHGAP27Q6ZUM4 889 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 IDI2Q9BXS1 227 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 CWC22Q9HCG8 908 aaKnown RBP11.33□□□□□ -0.6
NPHP1-202ENST00000355301 DDX4Q9NQI0 724 aaKnown RBP11.33□□□□□ -0.6
NPHP1-202ENST00000355301 TOMM22Q9NS69 142 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
NPHP1-202ENST00000355301 ANGEL1Q9UNK9 670 aaKnown RBP11.33□□□□□ -0.6
NPHP1-202ENST00000355301 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
NPHP1-202ENST00000355301 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
NPHP1-202ENST00000355301 RRP12Q5JTH9 1297 aaKnown RBP11.32□□□□□ -0.6
NPHP1-202ENST00000355301 STK11IPQ8N1F8 1099 aa11.32□□□□□ -0.6
NPHP1-202ENST00000355301 MTMR14Q8NCE2 650 aa11.32□□□□□ -0.6
NPHP1-202ENST00000355301 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
NPHP1-202ENST00000355301 ZNF274Q96GC6 653 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms