RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 STK3Q13188 491 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 SLF2Q8IX21 1173 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 SDR42E1Q8WUS8 393 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 SEC23AQ15436 765 aa20.21■□□□□ 0.83
VPS13B-201ENST00000355155 APOA5Q6Q788 366 aa20.21■□□□□ 0.83
VPS13B-201ENST00000355155 CHST3Q7LGC8 479 aa20.21■□□□□ 0.83
VPS13B-201ENST00000355155 GPHNQ9NQX3 736 aaPredicted RBP20.21■□□□□ 0.83
VPS13B-201ENST00000355155 ELP1O95163 1332 aa20.21■□□□□ 0.83
VPS13B-201ENST00000355155 RESTQ13127 1097 aa20.21■□□□□ 0.83
VPS13B-201ENST00000355155 PPP2R5BQ15173 497 aa20.21■□□□□ 0.83
VPS13B-201ENST00000355155 C2CD5Q86YS7 1000 aa20.21■□□□□ 0.83
VPS13B-201ENST00000355155 CNKSR1Q969H4 720 aa20.21■□□□□ 0.83
VPS13B-201ENST00000355155 EYA3Q99504 573 aa20.21■□□□□ 0.83
VPS13B-201ENST00000355155 MRIQ9BWK5 157 aa20.21■□□□□ 0.83
VPS13B-201ENST00000355155 BAG3O95817 575 aa20.2■□□□□ 0.82
VPS13B-201ENST00000355155 FDPSP14324 419 aaKnown RBP20.2■□□□□ 0.82
VPS13B-201ENST00000355155 CSPP1Q1MSJ5 1256 aa20.2■□□□□ 0.82
VPS13B-201ENST00000355155 H0YIN7 160 aa20.2■□□□□ 0.82
VPS13B-201ENST00000355155 ATL3Q6DD88 541 aa20.2■□□□□ 0.82
VPS13B-201ENST00000355155 CDC37L1Q7L3B6 337 aa20.2■□□□□ 0.82
VPS13B-201ENST00000355155 PLCG2P16885 1265 aa20.19■□□□□ 0.82
VPS13B-201ENST00000355155 DEKP35659 375 aaKnown RBP20.19■□□□□ 0.82
VPS13B-201ENST00000355155 ESR2Q92731 530 aa20.19■□□□□ 0.82
VPS13B-201ENST00000355155 GRIK5Q16478 980 aa20.19■□□□□ 0.82
VPS13B-201ENST00000355155 AATFQ9NY61 560 aaKnown RBP eCLIP20.19■□□□□ 0.82
VPS13B-201ENST00000355155 GOLGA8BA8MQT2 603 aa20.18■□□□□ 0.82
VPS13B-201ENST00000355155 KDM4AO75164 1064 aa20.18■□□□□ 0.82
VPS13B-201ENST00000355155 GPT2Q8TD30 523 aa20.18■□□□□ 0.82
VPS13B-201ENST00000355155 GPR101Q96P66 508 aaPredicted RBP20.18■□□□□ 0.82
VPS13B-201ENST00000355155 NTRK3Q16288 839 aa20.18■□□□□ 0.82
VPS13B-201ENST00000355155 FAM217BQ9NTX9 383 aaPredicted RBP20.18■□□□□ 0.82
VPS13B-201ENST00000355155 PRPF40AO75400 957 aaKnown RBP20.17■□□□□ 0.82
VPS13B-201ENST00000355155 CDKL5O76039 1030 aa20.17■□□□□ 0.82
VPS13B-201ENST00000355155 SART3Q15020 963 aaKnown RBP20.17■□□□□ 0.82
VPS13B-201ENST00000355155 TMEM67Q5HYA8 995 aa20.17■□□□□ 0.82
VPS13B-201ENST00000355155 DPP8Q6V1X1 898 aaPredicted RBP20.17■□□□□ 0.82
VPS13B-201ENST00000355155 ZNF445P59923 1031 aa20.17■□□□□ 0.82
VPS13B-201ENST00000355155 C12orf60Q5U649 245 aa20.17■□□□□ 0.82
VPS13B-201ENST00000355155 ANKS1AQ92625 1134 aa20.17■□□□□ 0.82
VPS13B-201ENST00000355155 PODNQ7Z5L7 613 aa20.17■□□□□ 0.82
VPS13B-201ENST00000355155 TAOK2Q9UL54 1235 aa20.17■□□□□ 0.82
VPS13B-201ENST00000355155 MYH1P12882 1939 aa20.16■□□□□ 0.82
VPS13B-201ENST00000355155 C6orf229H3BNL8 230 aa20.16■□□□□ 0.82
VPS13B-201ENST00000355155 DDX49Q9Y6V7 483 aaKnown RBP20.16■□□□□ 0.82
VPS13B-201ENST00000355155 SLC3A2P08195 630 aaKnown RBP20.16■□□□□ 0.82
VPS13B-201ENST00000355155 CCT2P78371 535 aaKnown RBP20.16■□□□□ 0.82
VPS13B-201ENST00000355155 SF3B2Q13435 895 aaKnown RBP20.16■□□□□ 0.82
VPS13B-201ENST00000355155 MSL1Q68DK7 614 aa20.16■□□□□ 0.82
VPS13B-201ENST00000355155 USP48Q86UV5 1035 aa20.16■□□□□ 0.82
VPS13B-201ENST00000355155 FAM184AQ8NB25 1140 aa20.16■□□□□ 0.82
VPS13B-201ENST00000355155 NCOA5Q9HCD5 579 aaKnown RBP20.16■□□□□ 0.82
VPS13B-201ENST00000355155 BRCA1P38398 1863 aaKnown RBP20.15■□□□□ 0.82
VPS13B-201ENST00000355155 USP17L12C9JPN9 530 aa20.15■□□□□ 0.82
VPS13B-201ENST00000355155 USP17L21D6R901 530 aa20.15■□□□□ 0.82
VPS13B-201ENST00000355155 IFIT3O14879 490 aaKnown RBP20.15■□□□□ 0.82
VPS13B-201ENST00000355155 ZBTB43O43298 467 aa20.15■□□□□ 0.82
VPS13B-201ENST00000355155 RHBDL3P58872 404 aa20.15■□□□□ 0.82
VPS13B-201ENST00000355155 ZC3H12CQ9C0D7 883 aaKnown RBP20.15■□□□□ 0.82
VPS13B-201ENST00000355155 INCENPQ9NQS7 918 aa20.15■□□□□ 0.82
VPS13B-201ENST00000355155 TCP11L1Q9NUJ3 509 aa20.15■□□□□ 0.82
VPS13B-201ENST00000355155 METAP2P50579 478 aaKnown RBP eCLIP20.15■□□□□ 0.82
VPS13B-201ENST00000355155 TMX4Q9H1E5 349 aaPredicted RBP20.15■□□□□ 0.82
VPS13B-201ENST00000355155 WTAPQ15007 396 aa20.14■□□□□ 0.82
VPS13B-201ENST00000355155 MFSD14BQ5SR56 506 aa20.14■□□□□ 0.82
VPS13B-201ENST00000355155 SH3RF3Q8TEJ3 882 aaPredicted RBP20.14■□□□□ 0.82
VPS13B-201ENST00000355155 VPS37CA5D8V6 355 aaPredicted RBP20.14■□□□□ 0.81
VPS13B-201ENST00000355155 UBE2HP62256 183 aa20.14■□□□□ 0.81
VPS13B-201ENST00000355155 NOL10Q9BSC4 688 aaKnown RBP20.14■□□□□ 0.81
VPS13B-201ENST00000355155 VPS33BQ9H267 617 aa20.14■□□□□ 0.81
VPS13B-201ENST00000355155 SENP2Q9HC62 589 aa20.14■□□□□ 0.81
VPS13B-201ENST00000355155 IFNAR1P17181 557 aa20.13■□□□□ 0.81
VPS13B-201ENST00000355155 HDLBPQ00341 1268 aaKnown RBP20.13■□□□□ 0.81
VPS13B-201ENST00000355155 ZSCAN10Q96SZ4 725 aaPredicted RBP20.13■□□□□ 0.81
VPS13B-201ENST00000355155 MAP3K14Q99558 947 aa20.13■□□□□ 0.81
VPS13B-201ENST00000355155 KRT85P78386 507 aa20.13■□□□□ 0.81
VPS13B-201ENST00000355155 CCDC178Q5BJE1 867 aa20.13■□□□□ 0.81
VPS13B-201ENST00000355155 HHIPL2Q6UWX4 724 aa20.13■□□□□ 0.81
VPS13B-201ENST00000355155 SUPT20HQ8NEM7 779 aa20.13■□□□□ 0.81
VPS13B-201ENST00000355155 CNPY2Q9Y2B0 182 aa20.13■□□□□ 0.81
VPS13B-201ENST00000355155 ADD1P35611 737 aaKnown RBP20.12■□□□□ 0.81
VPS13B-201ENST00000355155 SLC12A7Q9Y666 1083 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 SCN9AQ15858 1988 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 GREB1LQ9C091 1923 aaPredicted RBP20.12■□□□□ 0.81
VPS13B-201ENST00000355155 CCDC69A6NI79 296 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 MINDY4BA8MYZ0 360 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 CDC27P30260 824 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 BTDP43251 543 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
VPS13B-201ENST00000355155 CPLX2Q6PUV4 134 aaKnown RBP20.12■□□□□ 0.81
VPS13B-201ENST00000355155 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
VPS13B-201ENST00000355155 SCAND2PQ9GZW5 306 aaPredicted RBP20.12■□□□□ 0.81
VPS13B-201ENST00000355155 ERICH2A1L162 156 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 DDAH1O94760 285 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 NOVP48745 357 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 DNM1Q05193 864 aaKnown RBP20.12■□□□□ 0.81
VPS13B-201ENST00000355155 PDE4BQ07343 736 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 FBXO18Q8NFZ0 1043 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 CHAMP1Q96JM3 812 aa20.12■□□□□ 0.81
VPS13B-201ENST00000355155 FMNL1O95466 1100 aaPredicted RBP20.11■□□□□ 0.81
VPS13B-201ENST00000355155 DIXDC1Q155Q3 683 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms