RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 TMEM232C9JQI7 657 aa13.08□□□□□ -0.31
CAPN9-202ENST00000354537 ERCC5P28715 1186 aaPredicted RBP13.08□□□□□ -0.31
CAPN9-202ENST00000354537 TTF1Q15361 905 aaPredicted RBP13.08□□□□□ -0.31
CAPN9-202ENST00000354537 NTRK3Q16288 839 aa13.08□□□□□ -0.31
CAPN9-202ENST00000354537 CCDC57Q2TAC2 916 aa13.08□□□□□ -0.31
CAPN9-202ENST00000354537 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.31
CAPN9-202ENST00000354537 FOXP4Q8IVH2 680 aaPredicted RBP13.08□□□□□ -0.31
CAPN9-202ENST00000354537 ISCA1Q9BUE6 129 aa13.08□□□□□ -0.31
CAPN9-202ENST00000354537 PUS7LQ9H0K6 701 aaKnown RBP13.08□□□□□ -0.31
CAPN9-202ENST00000354537 ERICH4A6NGS2 130 aa13.08□□□□□ -0.32
CAPN9-202ENST00000354537 TXLNAP40222 546 aa13.08□□□□□ -0.32
CAPN9-202ENST00000354537 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.32
CAPN9-202ENST00000354537 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
CAPN9-202ENST00000354537 HNRNPH2P55795 449 aaKnown RBP13.08□□□□□ -0.32
CAPN9-202ENST00000354537 IRX5P78411 483 aaPredicted RBP13.08□□□□□ -0.32
CAPN9-202ENST00000354537 MORC3Q14149 939 aa13.08□□□□□ -0.32
CAPN9-202ENST00000354537 SMC1AQ14683 1233 aaKnown RBP13.08□□□□□ -0.32
CAPN9-202ENST00000354537 ALX1Q15699 326 aa13.08□□□□□ -0.32
CAPN9-202ENST00000354537 ISM2Q6H9L7 571 aa13.08□□□□□ -0.32
CAPN9-202ENST00000354537 APOA5Q6Q788 366 aa13.08□□□□□ -0.32
CAPN9-202ENST00000354537 GJB4Q9NTQ9 266 aa13.08□□□□□ -0.32
CAPN9-202ENST00000354537 WDR17Q8IZU2 1322 aa13.08□□□□□ -0.32
CAPN9-202ENST00000354537 LIFRP42702 1097 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 UBE3CQ15386 1083 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 EXOC4Q96A65 974 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 ZNF594Q96JF6 807 aaPredicted RBP13.07□□□□□ -0.32
CAPN9-202ENST00000354537 PUS3Q9BZE2 481 aaKnown RBP13.07□□□□□ -0.32
CAPN9-202ENST00000354537 MAN1B1Q9UKM7 699 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 ZBTB43O43298 467 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 TUBBP07437 444 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 BMP6P22004 513 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 PTPREP23469 700 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 ADD2P35612 726 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 NR1I3Q14994 352 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 POSTNQ15063 836 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 TTLL7Q6ZT98 887 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 MTA3Q9BTC8 594 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 TBC1D2BQ9UPU7 963 aa13.07□□□□□ -0.32
CAPN9-202ENST00000354537 CSF1RP07333 972 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 ZAP70P43403 619 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 PDE4BQ07343 736 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 RILPL1Q5EBL4 403 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 CEP112Q8N8E3 955 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 SPATA20Q8TB22 786 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 IGDCC4Q8TDY8 1250 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 CCDC34Q96HJ3 373 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 AK7Q96M32 723 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 WDR24Q96S15 920 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 FUT8Q9BYC5 575 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 PARD6BQ9BYG5 372 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 NBPF3Q9H094 633 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 RAI14Q9P0K7 980 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 MAP2K7O14733 419 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 SASH3O75995 380 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 FMNL1O95466 1100 aaPredicted RBP13.06□□□□□ -0.32
CAPN9-202ENST00000354537 CCDC175P0C221 793 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 CDK11BP21127 795 aaKnown RBP13.06□□□□□ -0.32
CAPN9-202ENST00000354537 OAS2P29728 719 aaKnown RBP13.06□□□□□ -0.32
CAPN9-202ENST00000354537 SSRP1Q08945 709 aaKnown RBP13.06□□□□□ -0.32
CAPN9-202ENST00000354537 SMARCE1Q969G3 411 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 FOXP1Q9H334 677 aaPredicted RBP13.06□□□□□ -0.32
CAPN9-202ENST00000354537 NFE2L3Q9Y4A8 694 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 UBR2Q8IWV8 1755 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 C1orf167Q5SNV9 1468 aa13.06□□□□□ -0.32
CAPN9-202ENST00000354537 A0A1B0GTH6 734 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 SEMA3EO15041 775 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 IFNAR1P17181 557 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 ADORA1P30542 326 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 USP5P45974 858 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 RCAN1P53805 252 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 ZC3H6P61129 1189 aaKnown RBP13.05□□□□□ -0.32
CAPN9-202ENST00000354537 SAFBQ15424 915 aaKnown RBP eCLIP13.05□□□□□ -0.32
CAPN9-202ENST00000354537 CYB5R4Q7L1T6 521 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 CCDC51Q96ER9 411 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 CLIC6Q96NY7 704 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 CEP131Q9UPN4 1083 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 MYH7P12883 1935 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 AKR1B15C9JRZ8 316 aaPredicted RBP13.05□□□□□ -0.32
CAPN9-202ENST00000354537 SEC31AO94979 1220 aaKnown RBP13.05□□□□□ -0.32
CAPN9-202ENST00000354537 PCCAP05165 728 aaPredicted RBP13.05□□□□□ -0.32
CAPN9-202ENST00000354537 CDC27P30260 824 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 PLCD1P51178 756 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 TOGARAM2Q6ZUX3 1019 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 STK11IPQ8N1F8 1099 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 IQUBQ8NA54 791 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 FAM217BQ9NTX9 383 aaPredicted RBP13.05□□□□□ -0.32
CAPN9-202ENST00000354537 CWC15Q9P013 229 aaKnown RBP13.05□□□□□ -0.32
CAPN9-202ENST00000354537 FBXO2Q9UK22 296 aaPredicted RBP13.05□□□□□ -0.32
CAPN9-202ENST00000354537 RAB21Q9UL25 225 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 ADAMTSL3P82987 1691 aa13.05□□□□□ -0.32
CAPN9-202ENST00000354537 GOLGA8AA7E2F4 631 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 TBC1D10CQ8IV04 446 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 PDILTQ8N807 584 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 AIFM3Q96NN9 605 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 LY9Q9HBG7 655 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 SRPRBQ9Y5M8 271 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms