RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 SCYL3Q8IZE3 742 aa19.95■□□□□ 0.78
DDX55-202ENST00000354291 SUCLG2Q96I99 432 aa19.95■□□□□ 0.78
DDX55-202ENST00000354291 HMX1Q9NP08 348 aaPredicted RBP19.95■□□□□ 0.78
DDX55-202ENST00000354291 USP40Q9NVE5 1235 aa19.95■□□□□ 0.78
DDX55-202ENST00000354291 FAM198AQ9UFP1 575 aa19.95■□□□□ 0.78
DDX55-202ENST00000354291 AFG3L2Q9Y4W6 797 aa19.95■□□□□ 0.78
DDX55-202ENST00000354291 ALPK3Q96L96 1907 aa19.94■□□□□ 0.78
DDX55-202ENST00000354291 ZNF316A6NFI3 1004 aaPredicted RBP19.94■□□□□ 0.78
DDX55-202ENST00000354291 DIXDC1Q155Q3 683 aa19.94■□□□□ 0.78
DDX55-202ENST00000354291 FAM161BQ96MY7 647 aa19.94■□□□□ 0.78
DDX55-202ENST00000354291 SLC45A1Q9Y2W3 748 aa19.94■□□□□ 0.78
DDX55-202ENST00000354291 DAGLAQ9Y4D2 1042 aa19.94■□□□□ 0.78
DDX55-202ENST00000354291 TRIM75PA6NK02 468 aa19.93■□□□□ 0.78
DDX55-202ENST00000354291 PHF20L1A8MW92 1017 aa19.93■□□□□ 0.78
DDX55-202ENST00000354291 VAMP4O75379 141 aa19.93■□□□□ 0.78
DDX55-202ENST00000354291 PDE8BO95263 885 aa19.93■□□□□ 0.78
DDX55-202ENST00000354291 HMGCRP04035 888 aa19.93■□□□□ 0.78
DDX55-202ENST00000354291 TRIM32Q13049 653 aa19.93■□□□□ 0.78
DDX55-202ENST00000354291 SLC4A10Q6U841 1118 aa19.93■□□□□ 0.78
DDX55-202ENST00000354291 WWC1Q8IX03 1113 aa19.93■□□□□ 0.78
DDX55-202ENST00000354291 RPTORQ8N122 1335 aa19.93■□□□□ 0.78
DDX55-202ENST00000354291 DOCK3Q8IZD9 2030 aa19.92■□□□□ 0.78
DDX55-202ENST00000354291 CCDC184Q52MB2 194 aa19.92■□□□□ 0.78
DDX55-202ENST00000354291 WDR66Q8TBY9 1149 aa19.92■□□□□ 0.78
DDX55-202ENST00000354291 KAZALD1Q96I82 304 aa19.92■□□□□ 0.78
DDX55-202ENST00000354291 LRRFIP2Q9Y608 721 aaKnown RBP19.92■□□□□ 0.78
DDX55-202ENST00000354291 ANP32CO43423 234 aa19.91■□□□□ 0.78
DDX55-202ENST00000354291 MDM2Q00987 491 aaPredicted RBP19.91■□□□□ 0.78
DDX55-202ENST00000354291 ZSCAN29Q8IWY8 852 aaPredicted RBP19.91■□□□□ 0.78
DDX55-202ENST00000354291 GUCD1Q96NT3 240 aa19.91■□□□□ 0.78
DDX55-202ENST00000354291 SPINK5Q9NQ38 1064 aaPredicted RBP19.91■□□□□ 0.78
DDX55-202ENST00000354291 ALDH1L1O75891 902 aa19.9■□□□□ 0.78
DDX55-202ENST00000354291 IFIT1P09914 478 aaKnown RBP19.9■□□□□ 0.78
DDX55-202ENST00000354291 CCDC27Q2M243 656 aa19.9■□□□□ 0.78
DDX55-202ENST00000354291 SRCIN1Q9C0H9 1055 aa19.9■□□□□ 0.78
DDX55-202ENST00000354291 EYSQ5T1H1 3165 aa19.9■□□□□ 0.78
DDX55-202ENST00000354291 PRUNE2Q8WUY3 3088 aa19.89■□□□□ 0.78
DDX55-202ENST00000354291 POTEB2H3BUK9 544 aa19.89■□□□□ 0.77
DDX55-202ENST00000354291 SLURP2P0DP57 97 aa19.89■□□□□ 0.77
DDX55-202ENST00000354291 FAM110CQ1W6H9 321 aa19.89■□□□□ 0.77
DDX55-202ENST00000354291 TREML2Q5T2D2 321 aa19.89■□□□□ 0.77
DDX55-202ENST00000354291 CCDC84Q86UT8 332 aaPredicted RBP19.89■□□□□ 0.77
DDX55-202ENST00000354291 VGLL2Q8N8G2 317 aa19.89■□□□□ 0.77
DDX55-202ENST00000354291 BICC1Q9H694 974 aaKnown RBP19.89■□□□□ 0.77
DDX55-202ENST00000354291 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.89■□□□□ 0.77
DDX55-202ENST00000354291 OGDHLQ9ULD0 1010 aa19.89■□□□□ 0.77
DDX55-202ENST00000354291 AGTPBP1Q9UPW5 1226 aa19.89■□□□□ 0.77
DDX55-202ENST00000354291 NBPF7P0C2Y1 421 aaPredicted RBP19.88■□□□□ 0.77
DDX55-202ENST00000354291 RGS3P49796 1198 aa19.88■□□□□ 0.77
DDX55-202ENST00000354291 EXOSC9Q06265 439 aaKnown RBP19.88■□□□□ 0.77
DDX55-202ENST00000354291 KLHDC4Q8TBB5 520 aa19.88■□□□□ 0.77
DDX55-202ENST00000354291 GJD2Q9UKL4 321 aa19.88■□□□□ 0.77
DDX55-202ENST00000354291 PNMA3Q9UL41 463 aa19.88■□□□□ 0.77
DDX55-202ENST00000354291 FANCIQ9NVI1 1328 aa19.87■□□□□ 0.77
DDX55-202ENST00000354291 PRDX5P30044 214 aa19.87■□□□□ 0.77
DDX55-202ENST00000354291 PUM3Q15397 648 aaKnown RBP19.87■□□□□ 0.77
DDX55-202ENST00000354291 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
DDX55-202ENST00000354291 FAM109BQ6ICB4 259 aaPredicted RBP19.87■□□□□ 0.77
DDX55-202ENST00000354291 MRS2Q9HD23 443 aa19.87■□□□□ 0.77
DDX55-202ENST00000354291 PRDM6Q9NQX0 595 aa19.87■□□□□ 0.77
DDX55-202ENST00000354291 DNAH12Q6ZR08 3092 aa19.87■□□□□ 0.77
DDX55-202ENST00000354291 PFASO15067 1338 aa19.86■□□□□ 0.77
DDX55-202ENST00000354291 IL16Q14005 1332 aa19.86■□□□□ 0.77
DDX55-202ENST00000354291 CTNND1O60716 968 aaKnown RBP19.86■□□□□ 0.77
DDX55-202ENST00000354291 LDHBP07195 334 aaKnown RBP19.86■□□□□ 0.77
DDX55-202ENST00000354291 CYP2B6P20813 491 aa19.86■□□□□ 0.77
DDX55-202ENST00000354291 SPTBN5Q9NRC6 3674 aaKnown RBP19.85■□□□□ 0.77
DDX55-202ENST00000354291 FGFR2P21802 821 aa19.85■□□□□ 0.77
DDX55-202ENST00000354291 SH3BP5LQ7L8J4 393 aa19.85■□□□□ 0.77
DDX55-202ENST00000354291 ENTPD3O75355 529 aa19.84■□□□□ 0.77
DDX55-202ENST00000354291 PRKAR2AP13861 404 aaKnown RBP19.84■□□□□ 0.77
DDX55-202ENST00000354291 SLC5A1P13866 664 aa19.84■□□□□ 0.77
DDX55-202ENST00000354291 GCLCP48506 637 aaPredicted RBP19.84■□□□□ 0.77
DDX55-202ENST00000354291 LRRC26Q2I0M4 334 aa19.84■□□□□ 0.77
DDX55-202ENST00000354291 TRIB2Q92519 343 aa19.84■□□□□ 0.77
DDX55-202ENST00000354291 ATRNL1Q5VV63 1379 aa19.83■□□□□ 0.77
DDX55-202ENST00000354291 KIF16BQ96L93 1317 aa19.83■□□□□ 0.77
DDX55-202ENST00000354291 DDTLA6NHG4 134 aaPredicted RBP19.83■□□□□ 0.77
DDX55-202ENST00000354291 SPP2Q13103 211 aa19.83■□□□□ 0.77
DDX55-202ENST00000354291 RABL6Q3YEC7 729 aaPredicted RBP19.83■□□□□ 0.77
DDX55-202ENST00000354291 ANKRD44Q8N8A2 993 aa19.83■□□□□ 0.77
DDX55-202ENST00000354291 LBHD1Q9BQE6 289 aaPredicted RBP19.83■□□□□ 0.77
DDX55-202ENST00000354291 IDI2Q9BXS1 227 aa19.83■□□□□ 0.77
DDX55-202ENST00000354291 SALL2Q9Y467 1007 aaPredicted RBP19.83■□□□□ 0.77
DDX55-202ENST00000354291 MAP3K10Q02779 954 aa19.82■□□□□ 0.76
DDX55-202ENST00000354291 PICALMQ13492 652 aa19.82■□□□□ 0.76
DDX55-202ENST00000354291 ZNF697Q5TEC3 545 aa19.82■□□□□ 0.76
DDX55-202ENST00000354291 LPIN2Q92539 896 aa19.82■□□□□ 0.76
DDX55-202ENST00000354291 TTC28Q96AY4 2481 aa19.81■□□□□ 0.76
DDX55-202ENST00000354291 CACNA1FO60840 1977 aa19.81■□□□□ 0.76
DDX55-202ENST00000354291 PABPC4Q13310 644 aaKnown RBP eCLIP19.81■□□□□ 0.76
DDX55-202ENST00000354291 PROCA1Q8NCQ7 364 aaPredicted RBP19.81■□□□□ 0.76
DDX55-202ENST00000354291 CDX2Q99626 313 aaPredicted RBP19.81■□□□□ 0.76
DDX55-202ENST00000354291 ASCC2Q9H1I8 757 aaPredicted RBP19.81■□□□□ 0.76
DDX55-202ENST00000354291 DDX60LQ5H9U9 1706 aaKnown RBP19.81■□□□□ 0.76
DDX55-202ENST00000354291 COL6A1P12109 1028 aa19.8■□□□□ 0.76
DDX55-202ENST00000354291 HMGCS2P54868 508 aa19.8■□□□□ 0.76
DDX55-202ENST00000354291 MAP3K21Q5TCX8 1036 aa19.8■□□□□ 0.76
DDX55-202ENST00000354291 MAFAQ8NHW3 353 aaPredicted RBP19.8■□□□□ 0.76
DDX55-202ENST00000354291 GNL3LQ9NVN8 582 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms