RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 SLC39A14Q15043 492 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 APOA5Q6Q788 366 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 IQCA1Q86XH1 822 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 TRIML1Q8N9V2 468 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 ZNF579Q8NAF0 562 aaKnown RBP4.3□□□□□ -1.72
RNF38-203ENST00000353739 PGBD1Q96JS3 809 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 SDF4Q9BRK5 362 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 LY9Q9HBG7 655 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 RAI14Q9P0K7 980 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 NDUFB9Q9Y6M9 179 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 CASZ1Q86V15 1759 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 FAM237AA0A1B0GTK4 181 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 NR1I2O75469 434 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 ADRA2BP18089 450 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 ANTXR2P58335 489 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 PDE4BQ07343 736 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 NOLC1Q14978 699 aaKnown RBP eCLIP4.3□□□□□ -1.72
RNF38-203ENST00000353739 SYCP1Q15431 976 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 CAMK4Q16566 473 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 PPP4R3BQ5MIZ7 849 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 TMC4Q7Z404 712 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 MAP3K14Q99558 947 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 RNF26Q9BY78 433 aaPredicted RBP4.3□□□□□ -1.72
RNF38-203ENST00000353739 LRRC2Q9BYS8 371 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 TFIP11Q9UBB9 837 aaKnown RBP4.3□□□□□ -1.72
RNF38-203ENST00000353739 CLIP2Q9UDT6 1046 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 HPS5Q9UPZ3 1129 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 PAXBP1Q9Y5B6 917 aa4.3□□□□□ -1.72
RNF38-203ENST00000353739 SMC2O95347 1197 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 LDHCP07864 332 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 CYP7A1P22680 504 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 U2AF2P26368 475 aaKnown RBP eCLIP4.29□□□□□ -1.723e-6■■■□□ 16.8
RNF38-203ENST00000353739 KIF5BP33176 963 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 ADD1P35611 737 aaKnown RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 HAND2P61296 217 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 RASGRF1Q13972 1273 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 TBC1D10CQ8IV04 446 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 CCDC112Q8NEF3 446 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 NLRP3Q96P20 1036 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 USP28Q96RU2 1077 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 SETDB2Q96T68 719 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 NARFQ9UHQ1 456 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 LY75O60449 1722 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 RPS6KA4O75676 772 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 KCNJ6P48051 423 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 GNAQP50148 359 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 TTLL5Q6EMB2 1281 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 TPTE2Q6XPS3 522 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 KRI1Q8N9T8 703 aaKnown RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 LZTS2Q9BRK4 669 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 KCND1Q9NSA2 647 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 ATP8A2Q9NTI2 1148 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 WWC3Q9ULE0 1092 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 PCDHA7Q9UN72 937 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 TAF6LQ9Y6J9 622 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 TNRC6CQ9HCJ0 1690 aaKnown RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 NEDD4P46934 1319 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 ORC4O43929 436 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 KRT2P35908 639 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 SYKP43405 635 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 SCARF1Q14162 830 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 RESP18Q5W5W9 173 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 KRT40Q6A162 431 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 GALNT17Q6IS24 598 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 ZNF804AQ7Z570 1209 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 FMR1NBQ8N0W7 255 aaPredicted RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 ENGASEQ8NFI3 743 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 IGDCC4Q8TDY8 1250 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 CCDC85AQ96PX6 553 aaPredicted RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 SLC4A9Q96Q91 983 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 ARMT1Q9H993 441 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 SH3GLB2Q9NR46 395 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 LEMD3Q9Y2U8 911 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 MYH13Q9UKX3 1938 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 B4E1Z4 1266 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 PRPF3O43395 683 aaKnown RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 MMP1P03956 469 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 FDPSP14324 419 aaKnown RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 PLCG2P16885 1265 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 TRAPPC10P48553 1259 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 SBK1Q52WX2 424 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 CKAP2LQ8IYA6 745 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 MARCH10Q8NA82 808 aaPredicted RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 WDR66Q8TBY9 1149 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 FERMT2Q96AC1 680 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 SLC26A6Q9BXS9 759 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 NCOA5Q9HCD5 579 aaKnown RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 KIAA1468Q9P260 1216 aa4.29□□□□□ -1.72
RNF38-203ENST00000353739 IQSEC3Q9UPP2 1182 aaPredicted RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 R3HCC1Q9Y3T6 440 aaKnown RBP4.29□□□□□ -1.72
RNF38-203ENST00000353739 UQCRHLA0A096LP55 91 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 A0A0G2JS52 829 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 BAG3O95817 575 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 UQCRHP07919 91 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 SNW1Q13573 536 aaKnown RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 C15orf52Q6ZUT6 534 aaKnown RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 CYB5R4Q7L1T6 521 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 NOSTRINQ8IVI9 506 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 MYRIPQ8NFW9 859 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms