RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 BCAMP50895 628 aa12.04□□□□□ -0.48
MRPL55-204ENST00000348259 DCAF15Q66K64 600 aa12.04□□□□□ -0.48
MRPL55-204ENST00000348259 TMEM57Q8N5G2 664 aa12.04□□□□□ -0.48
MRPL55-204ENST00000348259 HOOK2Q96ED9 719 aa12.04□□□□□ -0.48
MRPL55-204ENST00000348259 BICC1Q9H694 974 aaKnown RBP12.04□□□□□ -0.48
MRPL55-204ENST00000348259 ZBTB40Q9NUA8 1239 aa12.04□□□□□ -0.48
MRPL55-204ENST00000348259 LOC285556D6RIA3 1793 aa12.04□□□□□ -0.48
MRPL55-204ENST00000348259 PLXNB2O15031 1838 aa12.04□□□□□ -0.48
MRPL55-204ENST00000348259 SOX1O00570 391 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-204ENST00000348259 WDHD1O75717 1129 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-204ENST00000348259 MAP3K10Q02779 954 aa12.03□□□□□ -0.48
MRPL55-204ENST00000348259 PRKCZQ05513 592 aa12.03□□□□□ -0.48
MRPL55-204ENST00000348259 NFIAQ12857 509 aa12.03□□□□□ -0.48
MRPL55-204ENST00000348259 CHAF1AQ13111 956 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-204ENST00000348259 MIGA2Q7L4E1 593 aa12.03□□□□□ -0.48
MRPL55-204ENST00000348259 U2AF1L4Q8WU68 220 aaKnown RBP12.03□□□□□ -0.48
MRPL55-204ENST00000348259 SRCIN1Q9C0H9 1055 aa12.03□□□□□ -0.48
MRPL55-204ENST00000348259 C9orf78Q9NZ63 289 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-204ENST00000348259 FAM198AQ9UFP1 575 aa12.03□□□□□ -0.48
MRPL55-204ENST00000348259 GABRQQ9UN88 632 aa12.03□□□□□ -0.48
MRPL55-204ENST00000348259 DAGLAQ9Y4D2 1042 aa12.03□□□□□ -0.48
MRPL55-204ENST00000348259 DNAH12Q6ZR08 3092 aa12.03□□□□□ -0.48
MRPL55-204ENST00000348259 MAST3O60307 1309 aa12.03□□□□□ -0.48
MRPL55-204ENST00000348259 SPTBN5Q9NRC6 3674 aaKnown RBP12.02□□□□□ -0.48
MRPL55-204ENST00000348259 PHF20L1A8MW92 1017 aa12.02□□□□□ -0.49
MRPL55-204ENST00000348259 CXCL11O14625 94 aa12.02□□□□□ -0.49
MRPL55-204ENST00000348259 RFX5P48382 616 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-204ENST00000348259 ITPRIPQ8IWB1 547 aa12.02□□□□□ -0.49
MRPL55-204ENST00000348259 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.49
MRPL55-204ENST00000348259 DPF3Q92784 378 aa12.02□□□□□ -0.49
MRPL55-204ENST00000348259 UNC93B1Q9H1C4 597 aa12.02□□□□□ -0.49
MRPL55-204ENST00000348259 PAK6Q9NQU5 681 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-204ENST00000348259 A0A0G2JLL6 359 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-204ENST00000348259 FMNL1O95466 1100 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-204ENST00000348259 SGPL1O95470 568 aa12.01□□□□□ -0.49
MRPL55-204ENST00000348259 HOXD10P28358 340 aa12.01□□□□□ -0.49
MRPL55-204ENST00000348259 IRF5Q13568 498 aa12.01□□□□□ -0.49
MRPL55-204ENST00000348259 METTL24Q5JXM2 366 aa12.01□□□□□ -0.49
MRPL55-204ENST00000348259 CDC42EP5Q6NZY7 148 aa12.01□□□□□ -0.49
MRPL55-204ENST00000348259 PRRT2Q7Z6L0 340 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-204ENST00000348259 RAET1EQ8TD07 263 aa12.01□□□□□ -0.49
MRPL55-204ENST00000348259 HTATIP2Q9BUP3 242 aa12.01□□□□□ -0.49
MRPL55-204ENST00000348259 CRISPLD2Q9H0B8 497 aa12.01□□□□□ -0.49
MRPL55-204ENST00000348259 RNF208Q9H0X6 261 aa12.01□□□□□ -0.49
MRPL55-204ENST00000348259 RWDD1Q9H446 243 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-204ENST00000348259 TMOD2Q9NZR1 351 aa12.01□□□□□ -0.49
MRPL55-204ENST00000348259 ATAD5Q96QE3 1844 aa12□□□□□ -0.49
MRPL55-204ENST00000348259 FARP2O94887 1054 aaPredicted RBP12□□□□□ -0.49
MRPL55-204ENST00000348259 CYP2C8P10632 490 aa12□□□□□ -0.49
MRPL55-204ENST00000348259 CAPN2P17655 700 aa12□□□□□ -0.49
MRPL55-204ENST00000348259 HDAC1Q13547 482 aaPredicted RBP12□□□□□ -0.49
MRPL55-204ENST00000348259 CAVIN4Q5BKX8 364 aa12□□□□□ -0.49
MRPL55-204ENST00000348259 ZFPM1Q8IX07 1006 aa12□□□□□ -0.49
MRPL55-204ENST00000348259 KLHDC4Q8TBB5 520 aa12□□□□□ -0.49
MRPL55-204ENST00000348259 PXYLP1Q8TE99 480 aa12□□□□□ -0.49
MRPL55-204ENST00000348259 PARK7Q99497 189 aaKnown RBP12□□□□□ -0.49
MRPL55-204ENST00000348259 SLC45A1Q9Y2W3 748 aa12□□□□□ -0.49
MRPL55-204ENST00000348259 AFG3L2Q9Y4W6 797 aa12□□□□□ -0.49
MRPL55-204ENST00000348259 PCDHB15Q9Y5E8 787 aa12□□□□□ -0.49
MRPL55-204ENST00000348259 DDX60LQ5H9U9 1706 aaKnown RBP12□□□□□ -0.49
MRPL55-204ENST00000348259 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
MRPL55-204ENST00000348259 PRDX5P30044 214 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 FLT3LGP49771 235 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 FCGRTP55899 365 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 UBXN2AP68543 259 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 PUM3Q15397 648 aaKnown RBP11.99□□□□□ -0.49
MRPL55-204ENST00000348259 DIXDC1Q155Q3 683 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 SH3BP5LQ7L8J4 393 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 ATG9AQ7Z3C6 839 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 VPS37DQ86XT2 251 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 WDR66Q8TBY9 1149 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 GDF15Q99988 308 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 NR2E3Q9Y5X4 410 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 SALL1Q9NSC2 1324 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 SIPA1L1O43166 1804 aa11.99□□□□□ -0.49
MRPL55-204ENST00000348259 EYSQ5T1H1 3165 aa11.98□□□□□ -0.49
MRPL55-204ENST00000348259 GAKO14976 1311 aa11.98□□□□□ -0.49
MRPL55-204ENST00000348259 ADCY3O60266 1144 aa11.98□□□□□ -0.49
MRPL55-204ENST00000348259 IGHDP01880 384 aa11.98□□□□□ -0.49
MRPL55-204ENST00000348259 INHAP05111 366 aa11.98□□□□□ -0.49
MRPL55-204ENST00000348259 PTPRAP18433 802 aa11.98□□□□□ -0.49
MRPL55-204ENST00000348259 MNX1P50219 401 aaPredicted RBP11.98□□□□□ -0.49
MRPL55-204ENST00000348259 SLC4A10Q6U841 1118 aa11.98□□□□□ -0.49
MRPL55-204ENST00000348259 LRCH3Q96II8 777 aa11.98□□□□□ -0.49
MRPL55-204ENST00000348259 IDI2Q9BXS1 227 aa11.98□□□□□ -0.49
MRPL55-204ENST00000348259 USP44Q9H0E7 712 aa11.98□□□□□ -0.49
MRPL55-204ENST00000348259 VCANP13611 3396 aa11.98□□□□□ -0.49
MRPL55-204ENST00000348259 EYA2O00167 538 aa11.97□□□□□ -0.49
MRPL55-204ENST00000348259 DLL1O00548 723 aa11.97□□□□□ -0.49
MRPL55-204ENST00000348259 IFIT1P09914 478 aaKnown RBP11.97□□□□□ -0.49
MRPL55-204ENST00000348259 SLURP2P0DP57 97 aa11.97□□□□□ -0.49
MRPL55-204ENST00000348259 ELNP15502 786 aa11.97□□□□□ -0.49
MRPL55-204ENST00000348259 BMP8BP34820 402 aa11.97□□□□□ -0.49
MRPL55-204ENST00000348259 TCP10Q12799 353 aa11.97□□□□□ -0.49
MRPL55-204ENST00000348259 GPR153Q6NV75 609 aa11.97□□□□□ -0.49
MRPL55-204ENST00000348259 SCYL3Q8IZE3 742 aa11.97□□□□□ -0.49
MRPL55-204ENST00000348259 LPIN2Q92539 896 aa11.97□□□□□ -0.49
MRPL55-204ENST00000348259 FRMPD3Q5JV73 1810 aa11.96□□□□□ -0.49
MRPL55-204ENST00000348259 ENTPD3O75355 529 aa11.96□□□□□ -0.49
MRPL55-204ENST00000348259 FRAT2O75474 233 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms