RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 USP17L3A6NCW0 530 aa21.98■■□□□ 1.11
PTN-201ENST00000348225 USP17L4A6NCW7 530 aa21.98■■□□□ 1.11
PTN-201ENST00000348225 DALRD3Q5D0E6 543 aaKnown RBP21.98■■□□□ 1.11
PTN-201ENST00000348225 RRP12Q5JTH9 1297 aaKnown RBP21.98■■□□□ 1.11
PTN-201ENST00000348225 USP17L1Q7RTZ2 530 aa21.98■■□□□ 1.11
PTN-201ENST00000348225 VPS33BQ9H267 617 aa21.98■■□□□ 1.11
PTN-201ENST00000348225 CD2APQ9Y5K6 639 aa21.98■■□□□ 1.11
PTN-201ENST00000348225 BRCA1P38398 1863 aaKnown RBP21.97■■□□□ 1.11
PTN-201ENST00000348225 SH2B2O14492 632 aaPredicted RBP21.97■■□□□ 1.11
PTN-201ENST00000348225 KDM4AO75164 1064 aa21.97■■□□□ 1.11
PTN-201ENST00000348225 GJB2P29033 226 aa21.97■■□□□ 1.11
PTN-201ENST00000348225 SART3Q15020 963 aaKnown RBP21.97■■□□□ 1.11
PTN-201ENST00000348225 TEX11Q8IYF3 940 aa21.97■■□□□ 1.11
PTN-201ENST00000348225 ESR2Q92731 530 aa21.97■■□□□ 1.11
PTN-201ENST00000348225 SGIP1Q9BQI5 828 aa21.97■■□□□ 1.11
PTN-201ENST00000348225 MCM9Q9NXL9 1143 aa21.97■■□□□ 1.11
PTN-201ENST00000348225 NAP1L2Q9ULW6 460 aaPredicted RBP21.97■■□□□ 1.11
PTN-201ENST00000348225 DAGLAQ9Y4D2 1042 aa21.97■■□□□ 1.11
PTN-201ENST00000348225 CDK5RAP2Q96SN8 1893 aa21.97■■□□□ 1.11
PTN-201ENST00000348225 ZNF646O15015 1829 aaPredicted RBP21.96■■□□□ 1.11
PTN-201ENST00000348225 PSDA5PKW4 1024 aaPredicted RBP21.96■■□□□ 1.11
PTN-201ENST00000348225 F8W031 263 aaPredicted RBP21.96■■□□□ 1.11
PTN-201ENST00000348225 PDIA4P13667 645 aaKnown RBP21.96■■□□□ 1.11
PTN-201ENST00000348225 DACT2Q5SW24 774 aa21.96■■□□□ 1.11
PTN-201ENST00000348225 LLPHQ9BRT6 129 aaKnown RBP21.96■■□□□ 1.11
PTN-201ENST00000348225 ZSWIM5Q9P217 1185 aa21.96■■□□□ 1.11
PTN-201ENST00000348225 MKRN1Q9UHC7 482 aaKnown RBP21.96■■□□□ 1.11
PTN-201ENST00000348225 SCN9AQ15858 1988 aa21.96■■□□□ 1.11
PTN-201ENST00000348225 WDR33Q9C0J8 1336 aaKnown RBP21.96■■□□□ 1.11
PTN-201ENST00000348225 PDIA3P30101 505 aaKnown RBP21.95■■□□□ 1.1
PTN-201ENST00000348225 NT5C2P49902 561 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 SCRN1Q12765 414 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 PKP1Q13835 747 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 TGFBRAP1Q8WUH2 860 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 INCENPQ9NQS7 918 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 PPP1R1BQ9UD71 204 aaPredicted RBP21.95■■□□□ 1.1
PTN-201ENST00000348225 TACC3Q9Y6A5 838 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 PSME4Q14997 1843 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 CYP2D7A0A087X1C5 515 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 KLF18A0A0U1RQI7 1052 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 ERICH2A1L162 156 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 BRD1O95696 1058 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 FGRP09769 529 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 TMEM67Q5HYA8 995 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 HHIPL2Q6UWX4 724 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 TEKT1Q969V4 418 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 MXD3Q9BW11 206 aa21.95■■□□□ 1.1
PTN-201ENST00000348225 FOCADQ5VW36 1801 aa21.94■■□□□ 1.1
PTN-201ENST00000348225 IFIT3O14879 490 aaKnown RBP21.94■■□□□ 1.1
PTN-201ENST00000348225 LIFRP42702 1097 aa21.94■■□□□ 1.1
PTN-201ENST00000348225 RHBDL3P58872 404 aa21.94■■□□□ 1.1
PTN-201ENST00000348225 PDE4BQ07343 736 aa21.94■■□□□ 1.1
PTN-201ENST00000348225 STK11IPQ8N1F8 1099 aa21.94■■□□□ 1.1
PTN-201ENST00000348225 GPHNQ9NQX3 736 aaPredicted RBP21.94■■□□□ 1.1
PTN-201ENST00000348225 GOLGA8BA8MQT2 603 aa21.93■■□□□ 1.1
PTN-201ENST00000348225 ORC4O43929 436 aa21.93■■□□□ 1.1
PTN-201ENST00000348225 DHX16O60231 1041 aaKnown RBP21.93■■□□□ 1.1
PTN-201ENST00000348225 PDCP20941 246 aa21.93■■□□□ 1.1
PTN-201ENST00000348225 MAPKAPK5Q8IW41 473 aa21.93■■□□□ 1.1
PTN-201ENST00000348225 LARGE2Q8N3Y3 721 aa21.93■■□□□ 1.1
PTN-201ENST00000348225 IGDCC4Q8TDY8 1250 aa21.93■■□□□ 1.1
PTN-201ENST00000348225 UBAC1Q9BSL1 405 aa21.93■■□□□ 1.1
PTN-201ENST00000348225 MRIQ9BWK5 157 aa21.93■■□□□ 1.1
PTN-201ENST00000348225 KCNQ5Q9NR82 932 aa21.93■■□□□ 1.1
PTN-201ENST00000348225 DDX60LQ5H9U9 1706 aaKnown RBP21.93■■□□□ 1.1
PTN-201ENST00000348225 USP17L8P0C7I0 530 aa21.92■■□□□ 1.1
PTN-201ENST00000348225 MCM4P33991 863 aa21.92■■□□□ 1.1
PTN-201ENST00000348225 HDLBPQ00341 1268 aaKnown RBP21.92■■□□□ 1.1
PTN-201ENST00000348225 C12orf60Q5U649 245 aa21.92■■□□□ 1.1
PTN-201ENST00000348225 CLEC17AQ6ZS10 378 aa21.92■■□□□ 1.1
PTN-201ENST00000348225 SGMS1Q86VZ5 419 aa21.92■■□□□ 1.1
PTN-201ENST00000348225 KLHL34Q8N239 644 aa21.92■■□□□ 1.1
PTN-201ENST00000348225 NKX2-3Q8TAU0 364 aa21.92■■□□□ 1.1
PTN-201ENST00000348225 LY9Q9HBG7 655 aa21.92■■□□□ 1.1
PTN-201ENST00000348225 BRPF3Q9ULD4 1205 aa21.92■■□□□ 1.1
PTN-201ENST00000348225 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.92■■□□□ 1.1
PTN-201ENST00000348225 ZDHHC9Q9Y397 364 aa21.92■■□□□ 1.1
PTN-201ENST00000348225 ROBO3Q96MS0 1386 aa21.92■■□□□ 1.1
PTN-201ENST00000348225 DDX11L8A8MPP1 907 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 STX6O43752 255 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 CYP2D6P10635 497 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 SYT1P21579 422 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 PTGER2P43116 358 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 CCT2P78371 535 aaKnown RBP21.91■■□□□ 1.1
PTN-201ENST00000348225 NFXL1Q6ZNB6 911 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 TMTC2Q8N394 836 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 FLT1P17948 1338 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 POLR3DP05423 398 aaPredicted RBP21.91■■□□□ 1.1
PTN-201ENST00000348225 CRKP46108 304 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 SCNN1DP51172 638 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 HMGN5P82970 282 aaKnown RBP21.91■■□□□ 1.1
PTN-201ENST00000348225 WTAPQ15007 396 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 ZNF277Q9NRM2 450 aaPredicted RBP21.91■■□□□ 1.1
PTN-201ENST00000348225 KIF3AQ9Y496 699 aa21.91■■□□□ 1.1
PTN-201ENST00000348225 MYO3BQ8WXR4 1341 aa21.9■■□□□ 1.1
PTN-201ENST00000348225 CCDC69A6NI79 296 aa21.9■■□□□ 1.1
PTN-201ENST00000348225 RANBP6O60518 1105 aaKnown RBP21.9■■□□□ 1.1
PTN-201ENST00000348225 SYNE3Q6ZMZ3 975 aa21.9■■□□□ 1.1
PTN-201ENST00000348225 IQCA1Q86XH1 822 aa21.9■■□□□ 1.1
PTN-201ENST00000348225 KIAA0825Q8IV33 1275 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms