RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 ZNF790Q6PG37 636 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 MAGEB6P1A0A0J9YX57 407 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 SPDYE2BA6NHP3 402 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 LDHBP07195 334 aaKnown RBP13.19□□□□□ -0.3
TRAF3-201ENST00000347662 SPDYE6P0CI01 402 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 SEL1L2Q5TEA6 688 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 PARD3BQ8TEW8 1205 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 IFT74Q96LB3 600 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 NKIRAS1Q9NYS0 192 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 FAM182BQ5T319 152 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 CCDC102BQ68D86 513 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 MORC4Q8TE76 937 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 EYA3Q99504 573 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 SUFUQ9UMX1 484 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.19□□□□□ -0.3
TRAF3-201ENST00000347662 H0YIN7 160 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 IVLP07476 585 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 NBPF7P0C2Y1 421 aaPredicted RBP13.19□□□□□ -0.3
TRAF3-201ENST00000347662 PPARDQ03181 441 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 BIRC3Q13489 604 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 ZSCAN30Q86W11 494 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 SPATA17Q96L03 361 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 FNBP1Q96RU3 617 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 CARD14Q9BXL6 1004 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 CSPG5O95196 566 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 ARFGAP3Q9NP61 516 aa13.19□□□□□ -0.3
TRAF3-201ENST00000347662 NAPAP54920 295 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 RAPGEF1Q13905 1077 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 WDR44Q5JSH3 913 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 LINS1Q8NG48 757 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 RIOK1Q9BRS2 568 aaKnown RBP13.18□□□□□ -0.3
TRAF3-201ENST00000347662 BZW2Q9Y6E2 419 aaKnown RBP13.18□□□□□ -0.3
TRAF3-201ENST00000347662 PRAG1Q86YV5 1406 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 HMGB1P1B2RPK0 211 aaPredicted RBP13.18□□□□□ -0.3
TRAF3-201ENST00000347662 LTKP29376 864 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 FBXW4P57775 412 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 CHST3Q7LGC8 479 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
TRAF3-201ENST00000347662 NAP1L4Q99733 375 aaKnown RBP13.18□□□□□ -0.3
TRAF3-201ENST00000347662 LIMCH1Q9UPQ0 1083 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 LGR6Q9HBX8 967 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 TBC1D9Q6ZT07 1266 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 GPR161Q8N6U8 529 aaKnown RBP13.18□□□□□ -0.3
TRAF3-201ENST00000347662 RAB3GAP1Q15042 981 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 TTC31Q49AM3 519 aaPredicted RBP13.18□□□□□ -0.3
TRAF3-201ENST00000347662 LARGE2Q8N3Y3 721 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 SAP30BPQ9UHR5 308 aaKnown RBP13.18□□□□□ -0.3
TRAF3-201ENST00000347662 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 MCM5P33992 734 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 NEK11Q8NG66 645 aa13.18□□□□□ -0.3
TRAF3-201ENST00000347662 PDE6AP16499 860 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 MX2P20592 715 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 ACBD5Q5T8D3 534 aaPredicted RBP13.17□□□□□ -0.3
TRAF3-201ENST00000347662 RUFY3Q7L099 469 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 ESR2Q92731 530 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 BICC1Q9H694 974 aaKnown RBP13.17□□□□□ -0.3
TRAF3-201ENST00000347662 KLF18A0A0U1RQI7 1052 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 SPECC1L-ADORA2AF8WAN1 911 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 ADCY5O95622 1261 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 RNF217Q8TC41 542 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 GDPD2Q9HCC8 539 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 NEMFO60524 1076 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 OATP04181 439 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 TTC30BQ8N4P2 665 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 ATP2A3Q93084 1043 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 QTRT2Q9H974 415 aaKnown RBP13.17□□□□□ -0.3
TRAF3-201ENST00000347662 VPS18Q9P253 973 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 HNRNPCL2B2RXH8 293 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 HNRNPCL1O60812 293 aaKnown RBP13.17□□□□□ -0.3
TRAF3-201ENST00000347662 EAPPQ56P03 285 aaPredicted RBP13.17□□□□□ -0.3
TRAF3-201ENST00000347662 WDR62O43379 1518 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 SYKP43405 635 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 CTAGE1Q96RT6 745 aa13.17□□□□□ -0.3
TRAF3-201ENST00000347662 CDCA7Q9BWT1 371 aaPredicted RBP13.17□□□□□ -0.3
TRAF3-201ENST00000347662 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 SH2B1Q9NRF2 756 aaPredicted RBP13.16□□□□□ -0.3
TRAF3-201ENST00000347662 BCS1LQ9Y276 419 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 CAPN2P17655 700 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 GJB2P29033 226 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 DNAJC10Q8IXB1 793 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 MCUR1Q96AQ8 359 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 PAG1Q9NWQ8 432 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 IL16Q14005 1332 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 SLC12A2P55011 1212 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 TRPC3Q13507 836 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 NECAB1Q8N987 351 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 SETSIPP0DME0 302 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 TFCP2Q12800 502 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 ZYXQ15942 572 aaKnown RBP13.16□□□□□ -0.3
TRAF3-201ENST00000347662 CCDC171Q6TFL3 1326 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 ALDH1L1O75891 902 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 RILPL1Q5EBL4 403 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 NXNQ6DKJ4 435 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 PDZD8Q8NEN9 1154 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 BRF1Q92994 677 aa13.16□□□□□ -0.3
TRAF3-201ENST00000347662 OLA1Q9NTK5 396 aaKnown RBP13.16□□□□□ -0.3
TRAF3-201ENST00000347662 ZBTB43O43298 467 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 ATP5DP30049 168 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 TIMM10P62072 90 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 KIFAP3Q92845 792 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms