RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 MOXD2PA6NHM9 499 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 SRGAP3O43295 1099 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 ATP9BO43861 1147 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 RFX5P48382 616 aaPredicted RBP6.24□□□□□ -1.41
VCAM1-202ENST00000347652 PODNQ7Z5L7 613 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 MCF2L2Q86YR7 1114 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 TTC30BQ8N4P2 665 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 MASTLQ96GX5 879 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 ASB16Q96NS5 453 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 NLRP3Q96P20 1036 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 RWDD1Q9H446 243 aaPredicted RBP6.24□□□□□ -1.41
VCAM1-202ENST00000347652 CHD4Q14839 1912 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 RTL9Q8NET4 1388 aa6.24□□□□□ -1.41
VCAM1-202ENST00000347652 NFKBIEO00221 500 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 HMMRO75330 724 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 NPR1P16066 1061 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 UBE4AQ14139 1066 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 CCDC152Q4G0S7 254 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 CCAR1Q8IX12 1150 aaKnown RBP6.23□□□□□ -1.41
VCAM1-202ENST00000347652 SDR16C5Q8N3Y7 309 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 LRRN4Q8WUT4 740 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 GREM2Q9H772 168 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 SEC31BQ9NQW1 1179 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 CCDC88AQ3V6T2 1871 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 MYH3P11055 1940 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 DHX16O60231 1041 aaKnown RBP6.23□□□□□ -1.41
VCAM1-202ENST00000347652 STYK1Q6J9G0 422 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 C7orf43Q8WVR3 580 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 SPIRE2Q8WWL2 714 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 KDM2BQ8NHM5 1336 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 SBF1O95248 1867 aa6.23□□□□□ -1.41
VCAM1-202ENST00000347652 DNAJC6O75061 913 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 ITGA6P23229 1130 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 PTPN12Q05209 780 aaKnown RBP6.22□□□□□ -1.41
VCAM1-202ENST00000347652 CTDSPL2Q05D32 466 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 WASHC4Q2M389 1173 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 ATL2Q8NHH9 583 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 RPGRQ92834 1020 aaKnown RBP6.22□□□□□ -1.41
VCAM1-202ENST00000347652 CELF1Q92879 486 aaKnown RBP6.22□□□□□ -1.41
VCAM1-202ENST00000347652 L3MBTL3Q96JM7 780 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-202ENST00000347652 DCTPP1Q9H773 170 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 COPRSQ9NQ92 184 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 CHMP3Q9Y3E7 222 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 FER1L6Q2WGJ9 1857 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 ANKRD18BA2A2Z9 1011 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 GRIN3BO60391 1043 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 YY1P25490 414 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 RACK1P63244 317 aaKnown RBP6.22□□□□□ -1.41
VCAM1-202ENST00000347652 IFIT5Q13325 482 aaKnown RBP6.22□□□□□ -1.41
VCAM1-202ENST00000347652 CCDC57Q2TAC2 916 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 METTL3Q86U44 580 aaKnown RBP6.22□□□□□ -1.41
VCAM1-202ENST00000347652 PGBD3Q8N328 593 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 C1orf131Q8NDD1 294 aaKnown RBP6.22□□□□□ -1.41
VCAM1-202ENST00000347652 INO80BQ9C086 356 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-202ENST00000347652 TGIF2Q9GZN2 237 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 TPX2Q9ULW0 747 aaKnown RBP6.22□□□□□ -1.41
VCAM1-202ENST00000347652 CEP350Q5VT06 3117 aa6.22□□□□□ -1.41
VCAM1-202ENST00000347652 WTIPA6NIX2 430 aaPredicted RBP6.21□□□□□ -1.41
VCAM1-202ENST00000347652 FAM163BP0C2L3 166 aa6.21□□□□□ -1.41
VCAM1-202ENST00000347652 HOXA10P31260 410 aaPredicted RBP6.21□□□□□ -1.41
VCAM1-202ENST00000347652 GNALP38405 381 aa6.21□□□□□ -1.41
VCAM1-202ENST00000347652 ARHGAP4P98171 946 aa6.21□□□□□ -1.41
VCAM1-202ENST00000347652 ELOAQ14241 798 aaKnown RBP6.21□□□□□ -1.41
VCAM1-202ENST00000347652 KLHDC4Q8TBB5 520 aa6.21□□□□□ -1.41
VCAM1-202ENST00000347652 SNED1Q8TER0 1413 aa6.21□□□□□ -1.41
VCAM1-202ENST00000347652 CNKSR1Q969H4 720 aa6.21□□□□□ -1.41
VCAM1-202ENST00000347652 GCC1Q96CN9 775 aa6.21□□□□□ -1.41
VCAM1-202ENST00000347652 ZNF594Q96JF6 807 aaPredicted RBP6.21□□□□□ -1.41
VCAM1-202ENST00000347652 SCYL1Q96KG9 808 aa6.21□□□□□ -1.41
VCAM1-202ENST00000347652 RNPC3Q96LT9 517 aaKnown RBP6.21□□□□□ -1.41
VCAM1-202ENST00000347652 SPEF2Q9C093 1822 aa6.21□□□□□ -1.41
VCAM1-202ENST00000347652 PRM3Q9NNZ6 103 aa6.21□□□□□ -1.41
VCAM1-202ENST00000347652 PA2G4Q9UQ80 394 aaKnown RBP6.21□□□□□ -1.41
VCAM1-202ENST00000347652 USP17L15C9J2P7 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L10C9JJH3 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L13C9JLJ4 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L12C9JPN9 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L11C9JVI0 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L21D6R901 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L18D6R9N7 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L22D6RA61 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L17D6RBQ6 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L19D6RCP7 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L20D6RJB6 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 PRMT3O60678 531 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L24Q0WX57 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 CENPQQ7L2Z9 268 aaPredicted RBP6.21□□□□□ -1.42
VCAM1-202ENST00000347652 ENOX1Q8TC92 643 aaKnown RBP6.21□□□□□ -1.42
VCAM1-202ENST00000347652 RBM17Q96I25 401 aaKnown RBP6.21□□□□□ -1.42
VCAM1-202ENST00000347652 GMLQ99445 158 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 PDZRN3Q9UPQ7 1066 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 COL4A5P29400 1685 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L3A6NCW0 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L4A6NCW7 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 PPEF1O14829 653 aaPredicted RBP6.21□□□□□ -1.42
VCAM1-202ENST00000347652 SURF6O75683 361 aaKnown RBP6.21□□□□□ -1.42
VCAM1-202ENST00000347652 CIAO1O76071 339 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L2Q6R6M4 530 aa6.21□□□□□ -1.42
VCAM1-202ENST00000347652 DDX46Q7L014 1031 aaKnown RBP6.21□□□□□ -1.42
VCAM1-202ENST00000347652 USP17L1Q7RTZ2 530 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms