RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CERS3Q8IU89 383 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 PFKFB1P16118 471 aa16.72■□□□□ 0.27
NUP50-201ENST00000347635 ITGA6P23229 1130 aa16.72■□□□□ 0.27
NUP50-201ENST00000347635 PUM3Q15397 648 aaKnown RBP16.72■□□□□ 0.27
NUP50-201ENST00000347635 VPS18Q9P253 973 aa16.72■□□□□ 0.27
NUP50-201ENST00000347635 KRT40Q6A162 431 aa16.72■□□□□ 0.27
NUP50-201ENST00000347635 KAT14Q9H8E8 782 aa16.72■□□□□ 0.27
NUP50-201ENST00000347635 TSPY2A6NKD2 308 aa16.72■□□□□ 0.27
NUP50-201ENST00000347635 C11orf57Q6ZUT1 292 aaPredicted RBP16.72■□□□□ 0.27
NUP50-201ENST00000347635 SYCP1Q15431 976 aa16.72■□□□□ 0.27
NUP50-201ENST00000347635 UTP14CQ5TAP6 766 aaKnown RBP16.72■□□□□ 0.27
NUP50-201ENST00000347635 FAM196AQ6ZSG2 479 aa16.72■□□□□ 0.27
NUP50-201ENST00000347635 CACTINQ8WUQ7 758 aaKnown RBP16.72■□□□□ 0.27
NUP50-201ENST00000347635 QTRT2Q9H974 415 aaKnown RBP16.72■□□□□ 0.27
NUP50-201ENST00000347635 CAPN2P17655 700 aa16.71■□□□□ 0.27
NUP50-201ENST00000347635 MLKLQ8NB16 471 aa16.71■□□□□ 0.27
NUP50-201ENST00000347635 TDRD12Q587J7 1177 aaKnown RBP16.71■□□□□ 0.27
NUP50-201ENST00000347635 HDXQ7Z353 690 aa16.71■□□□□ 0.27
NUP50-201ENST00000347635 HSPD1P10809 573 aaKnown RBP16.71■□□□□ 0.27
NUP50-201ENST00000347635 TMEM266Q2M3C6 531 aa16.71■□□□□ 0.27
NUP50-201ENST00000347635 EHMT1Q9H9B1 1298 aa16.71■□□□□ 0.27
NUP50-201ENST00000347635 RHOXF2BP0C7M4 288 aa16.71■□□□□ 0.26
NUP50-201ENST00000347635 IGSF22Q8N9C0 903 aa16.71■□□□□ 0.26
NUP50-201ENST00000347635 ZFP91Q96JP5 570 aaPredicted RBP16.71■□□□□ 0.26
NUP50-201ENST00000347635 RHOXF2Q9BQY4 288 aa16.71■□□□□ 0.26
NUP50-201ENST00000347635 RAB34Q9BZG1 259 aa16.71■□□□□ 0.26
NUP50-201ENST00000347635 COPRSQ9NQ92 184 aa16.71■□□□□ 0.26
NUP50-201ENST00000347635 KAT6BQ8WYB5 2073 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 NDUFA8P51970 172 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 PNOCQ13519 176 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 CALML4Q96GE6 196 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 DBNLQ9UJU6 430 aaKnown RBP16.7■□□□□ 0.26
NUP50-201ENST00000347635 ATP10DQ9P241 1426 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 MROH5Q6ZUA9 1318 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 NEURL4Q96JN8 1562 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 ZNF76P36508 570 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 EXOC1Q9NV70 894 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 APBA3O96018 575 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 CYP21A2P08686 494 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 CALM1P0DP23 149 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 CALM2P0DP24 149 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 CALM3P0DP25 149 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 PDIA3P30101 505 aaKnown RBP16.7■□□□□ 0.26
NUP50-201ENST00000347635 POLR2DO15514 142 aaKnown RBP16.7■□□□□ 0.26
NUP50-201ENST00000347635 DEXIO95424 95 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 KRT83P78385 493 aa16.7■□□□□ 0.26
NUP50-201ENST00000347635 NSUN7Q8NE18 718 aaKnown RBP16.7■□□□□ 0.26
NUP50-201ENST00000347635 FRMPD1Q5SYB0 1578 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 MYO3AQ8NEV4 1616 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 MAGEB6P1A0A0J9YX57 407 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 TUBBP07437 444 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 UBXN1Q04323 297 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 TNIP1Q15025 636 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 SPECC1Q5M775 1068 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 PHKBQ93100 1093 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 ADGRB1O14514 1584 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 A0A1W2PQ27 194 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 A0A1W2PQ64 194 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 A0A1W2PQD8 194 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 MBD4O95243 580 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 RESTQ13127 1097 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 ERCC6LQ2NKX8 1250 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 JDP2Q8WYK2 163 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 ZKSCAN3Q9BRR0 538 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 RPAP1Q9BWH6 1393 aaPredicted RBP16.69■□□□□ 0.26
NUP50-201ENST00000347635 PSMA7O14818 248 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 CCDC96Q2M329 555 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 RTEL1Q9NZ71 1219 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 GUCA1BQ9UMX6 200 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 USP32Q8NFA0 1604 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 CMA1P23946 247 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 GNAQP50148 359 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 CHMP4BP1P59074 171 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 RBM6P78332 1123 aaKnown RBP16.69■□□□□ 0.26
NUP50-201ENST00000347635 POSTNQ15063 836 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 CUL5Q93034 780 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 NFE2L3Q9Y4A8 694 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 PIK3C2BO00750 1634 aa16.69■□□□□ 0.26
NUP50-201ENST00000347635 DNA2P51530 1060 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 MTX1Q13505 466 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 TUBB2AQ13885 445 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 DIS3L2Q8IYB7 885 aaKnown RBP16.68■□□□□ 0.26
NUP50-201ENST00000347635 TUBB2BQ9BVA1 445 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 SPTLC3Q9NUV7 552 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 IL6STP40189 918 aaPredicted RBP16.68■□□□□ 0.26
NUP50-201ENST00000347635 SUPT20HQ8NEM7 779 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 NAA15Q9BXJ9 866 aaKnown RBP16.68■□□□□ 0.26
NUP50-201ENST00000347635 CLIC4Q9Y696 253 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 PSDA5PKW4 1024 aaPredicted RBP16.68■□□□□ 0.26
NUP50-201ENST00000347635 KRT86O43790 486 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 MATR3P43243 847 aaKnown RBP eCLIP16.68■□□□□ 0.26
NUP50-201ENST00000347635 RSPH14Q9UHP6 348 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 MYOM1P52179 1685 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 LOC102724428A0A0B4J2F2 783 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 ZAP70P43403 619 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 SIK1P57059 783 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 SPATA31D1Q6ZQQ2 1576 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 IQUBQ8NA54 791 aa16.68■□□□□ 0.26
NUP50-201ENST00000347635 SYNRGQ9UMZ2 1314 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms