RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 TCP10Q12799 353 aa23.07■■□□□ 1.28
CCDC78-202ENST00000345165 PIH1D3Q9NQM4 214 aaKnown RBP23.07■■□□□ 1.28
CCDC78-202ENST00000345165 TESPA1A2RU30 521 aaPredicted RBP23.06■■□□□ 1.28
CCDC78-202ENST00000345165 SPDYE5A6NIY4 337 aa23.06■■□□□ 1.28
CCDC78-202ENST00000345165 MAP3K12Q12852 859 aa23.06■■□□□ 1.28
CCDC78-202ENST00000345165 WRNIP1Q96S55 665 aa23.06■■□□□ 1.28
CCDC78-202ENST00000345165 ATP5JP18859 108 aa23.05■■□□□ 1.28
CCDC78-202ENST00000345165 NOL9Q5SY16 702 aaKnown RBP23.05■■□□□ 1.28
CCDC78-202ENST00000345165 DDX4Q9NQI0 724 aaKnown RBP23.05■■□□□ 1.28
CCDC78-202ENST00000345165 TBC1D12O60347 775 aa23.04■■□□□ 1.28
CCDC78-202ENST00000345165 ERO1BQ86YB8 467 aa23.04■■□□□ 1.28
CCDC78-202ENST00000345165 OPTNQ96CV9 577 aa23.04■■□□□ 1.28
CCDC78-202ENST00000345165 SNCAIPQ9Y6H5 919 aa23.04■■□□□ 1.28
CCDC78-202ENST00000345165 APBB1O00213 710 aa23.03■■□□□ 1.28
CCDC78-202ENST00000345165 IDH1O75874 414 aaKnown RBP23.03■■□□□ 1.28
CCDC78-202ENST00000345165 DHX36Q9H2U1 1008 aaKnown RBP23.03■■□□□ 1.28
CCDC78-202ENST00000345165 PCDHB15Q9Y5E8 787 aa23.03■■□□□ 1.28
CCDC78-202ENST00000345165 TRPA1O75762 1119 aa23.02■■□□□ 1.28
CCDC78-202ENST00000345165 GJA5P36382 358 aa23.02■■□□□ 1.28
CCDC78-202ENST00000345165 SH3BP5LQ7L8J4 393 aa23.02■■□□□ 1.28
CCDC78-202ENST00000345165 ZFPM1Q8IX07 1006 aa23.02■■□□□ 1.28
CCDC78-202ENST00000345165 TEX11Q8IYF3 940 aa23.02■■□□□ 1.28
CCDC78-202ENST00000345165 OSBPL5Q9H0X9 879 aaPredicted RBP23.02■■□□□ 1.28
CCDC78-202ENST00000345165 ELP3Q9H9T3 547 aa23.02■■□□□ 1.28
CCDC78-202ENST00000345165 DOCK1Q14185 1865 aa23.01■■□□□ 1.27
CCDC78-202ENST00000345165 GTF2A2P52657 109 aa23.01■■□□□ 1.27
CCDC78-202ENST00000345165 PPATQ06203 517 aa23.01■■□□□ 1.27
CCDC78-202ENST00000345165 OTUD7BQ6GQQ9 843 aa23.01■■□□□ 1.27
CCDC78-202ENST00000345165 ADGRA1Q86SQ6 560 aa23.01■■□□□ 1.27
CCDC78-202ENST00000345165 IFNL1Q8IU54 200 aa23.01■■□□□ 1.27
CCDC78-202ENST00000345165 TNS4Q8IZW8 715 aa23.01■■□□□ 1.27
CCDC78-202ENST00000345165 MS4A4AQ96JQ5 239 aa23.01■■□□□ 1.27
CCDC78-202ENST00000345165 ZCCHC17Q9NP64 241 aaKnown RBP23.01■■□□□ 1.27
CCDC78-202ENST00000345165 AATFQ9NY61 560 aaKnown RBP eCLIP23.01■■□□□ 1.27
CCDC78-202ENST00000345165 MYH7P12883 1935 aa23.01■■□□□ 1.27
CCDC78-202ENST00000345165 DDTLA6NHG4 134 aaPredicted RBP23■■□□□ 1.27
CCDC78-202ENST00000345165 PPIL2Q13356 520 aa23■■□□□ 1.27
CCDC78-202ENST00000345165 HDAC1Q13547 482 aaPredicted RBP23■■□□□ 1.27
CCDC78-202ENST00000345165 ZSCAN29Q8IWY8 852 aaPredicted RBP23■■□□□ 1.27
CCDC78-202ENST00000345165 CRBNQ96SW2 442 aa23■■□□□ 1.27
CCDC78-202ENST00000345165 HAUS7Q99871 368 aa23■■□□□ 1.27
CCDC78-202ENST00000345165 ANTXR1Q9H6X2 564 aa23■■□□□ 1.27
CCDC78-202ENST00000345165 PHF20L1A8MW92 1017 aa22.99■■□□□ 1.27
CCDC78-202ENST00000345165 CYP7A1P22680 504 aa22.99■■□□□ 1.27
CCDC78-202ENST00000345165 PICALMQ13492 652 aa22.99■■□□□ 1.27
CCDC78-202ENST00000345165 IFFO2Q5TF58 517 aa22.99■■□□□ 1.27
CCDC78-202ENST00000345165 MIGA2Q7L4E1 593 aa22.99■■□□□ 1.27
CCDC78-202ENST00000345165 SH3RF3Q8TEJ3 882 aaPredicted RBP22.99■■□□□ 1.27
CCDC78-202ENST00000345165 ZKSCAN4Q969J2 545 aaPredicted RBP22.99■■□□□ 1.27
CCDC78-202ENST00000345165 GPATCH3Q96I76 525 aa22.99■■□□□ 1.27
CCDC78-202ENST00000345165 HERC5Q9UII4 1024 aaKnown RBP22.99■■□□□ 1.27
CCDC78-202ENST00000345165 CASP8AP2Q9UKL3 1982 aa22.99■■□□□ 1.27
CCDC78-202ENST00000345165 MKRN3Q13064 507 aaKnown RBP22.98■■□□□ 1.27
CCDC78-202ENST00000345165 METTL16Q86W50 562 aaKnown RBP22.98■■□□□ 1.27
CCDC78-202ENST00000345165 MAGEB6Q8N7X4 407 aa22.98■■□□□ 1.27
CCDC78-202ENST00000345165 ECHDC1Q9NTX5 307 aa22.98■■□□□ 1.27
CCDC78-202ENST00000345165 PAG1Q9NWQ8 432 aa22.98■■□□□ 1.27
CCDC78-202ENST00000345165 TSKSQ9UJT2 592 aa22.98■■□□□ 1.27
CCDC78-202ENST00000345165 DDX60LQ5H9U9 1706 aaKnown RBP22.98■■□□□ 1.27
CCDC78-202ENST00000345165 SIPA1L1O43166 1804 aa22.98■■□□□ 1.27
CCDC78-202ENST00000345165 CTNND1O60716 968 aaKnown RBP22.97■■□□□ 1.27
CCDC78-202ENST00000345165 INPP5BP32019 993 aa22.97■■□□□ 1.27
CCDC78-202ENST00000345165 OTUD5Q96G74 571 aa22.97■■□□□ 1.27
CCDC78-202ENST00000345165 PI4KBQ9UBF8 816 aa22.97■■□□□ 1.27
CCDC78-202ENST00000345165 KCNH4Q9UQ05 1017 aa22.97■■□□□ 1.27
CCDC78-202ENST00000345165 FLT1P17948 1338 aa22.97■■□□□ 1.27
CCDC78-202ENST00000345165 GOLIM4O00461 696 aa22.96■■□□□ 1.27
CCDC78-202ENST00000345165 CETPP11597 493 aa22.96■■□□□ 1.27
CCDC78-202ENST00000345165 PDE6AP16499 860 aa22.96■■□□□ 1.27
CCDC78-202ENST00000345165 SNAPC2Q13487 334 aa22.96■■□□□ 1.27
CCDC78-202ENST00000345165 SCYL3Q8IZE3 742 aa22.96■■□□□ 1.27
CCDC78-202ENST00000345165 GCC1Q96CN9 775 aa22.96■■□□□ 1.27
CCDC78-202ENST00000345165 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.96■■□□□ 1.276e-8■■■■■ 46.2
CCDC78-202ENST00000345165 NDUFB9Q9Y6M9 179 aa22.96■■□□□ 1.27
CCDC78-202ENST00000345165 MYH1P12882 1939 aa22.96■■□□□ 1.27
CCDC78-202ENST00000345165 IGF2BP3O00425 579 aaKnown RBP eCLIP22.95■■□□□ 1.26
CCDC78-202ENST00000345165 SLC9C2Q5TAH2 1124 aa22.95■■□□□ 1.26
CCDC78-202ENST00000345165 TTC41PQ6P2S7 1318 aa22.95■■□□□ 1.26
CCDC78-202ENST00000345165 DNAJC2Q99543 621 aaKnown RBP22.95■■□□□ 1.26
CCDC78-202ENST00000345165 RIOK1Q9BRS2 568 aaKnown RBP22.95■■□□□ 1.26
CCDC78-202ENST00000345165 TBC1D2Q9BYX2 928 aa22.95■■□□□ 1.26
CCDC78-202ENST00000345165 TAOK2Q9UL54 1235 aa22.95■■□□□ 1.26
CCDC78-202ENST00000345165 PHIPQ8WWQ0 1821 aa22.94■■□□□ 1.26
CCDC78-202ENST00000345165 ATAD5Q96QE3 1844 aa22.94■■□□□ 1.26
CCDC78-202ENST00000345165 TCRBV5S4A2TA0A5A2 114 aa22.94■■□□□ 1.26
CCDC78-202ENST00000345165 IRF6O14896 467 aa22.94■■□□□ 1.26
CCDC78-202ENST00000345165 CNKSR2Q8WXI2 1034 aa22.94■■□□□ 1.26
CCDC78-202ENST00000345165 BOLA2Q9H3K6 86 aa22.94■■□□□ 1.26
CCDC78-202ENST00000345165 PTPRFP10586 1907 aa22.93■■□□□ 1.26
CCDC78-202ENST00000345165 CXCL11O14625 94 aa22.93■■□□□ 1.26
CCDC78-202ENST00000345165 SMARCA5O60264 1052 aaPredicted RBP22.93■■□□□ 1.26
CCDC78-202ENST00000345165 FOXP4Q8IVH2 680 aaPredicted RBP22.93■■□□□ 1.26
CCDC78-202ENST00000345165 TGFBRAP1Q8WUH2 860 aa22.93■■□□□ 1.26
CCDC78-202ENST00000345165 BRI3BPQ8WY22 251 aa22.93■■□□□ 1.26
CCDC78-202ENST00000345165 PTPN18Q99952 460 aa22.93■■□□□ 1.26
CCDC78-202ENST00000345165 GINM1Q9NU53 330 aa22.93■■□□□ 1.26
CCDC78-202ENST00000345165 CCL15-CCL14A0A0B4J2E2 113 aa22.92■■□□□ 1.26
CCDC78-202ENST00000345165 UBE3CQ15386 1083 aa22.92■■□□□ 1.26
CCDC78-202ENST00000345165 CCL15Q16663 113 aa22.92■■□□□ 1.26
CCDC78-202ENST00000345165 ZSCAN25Q6NSZ9 544 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms